RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 LAS1LQ9Y4W2 734 aaKnown RBP10.7□□□□□ -0.7
NECAP1-202ENST00000450991 ABCC6O95255 1503 aa10.7□□□□□ -0.7
NECAP1-202ENST00000450991 ERBB3P21860 1342 aa10.7□□□□□ -0.7
NECAP1-202ENST00000450991 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
NECAP1-202ENST00000450991 RARSP54136 660 aaKnown RBP10.7□□□□□ -0.7
NECAP1-202ENST00000450991 C20orf194Q5TEA3 1177 aa10.7□□□□□ -0.7
NECAP1-202ENST00000450991 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.7□□□□□ -0.7
NECAP1-202ENST00000450991 NCAPD2Q15021 1401 aa10.7□□□□□ -0.7
NECAP1-202ENST00000450991 CSB-PGBD3P0DP91 1061 aa10.69□□□□□ -0.7
NECAP1-202ENST00000450991 MCM10Q7L590 875 aa10.69□□□□□ -0.7
NECAP1-202ENST00000450991 NLRP2Q9NX02 1062 aa10.69□□□□□ -0.7
NECAP1-202ENST00000450991 ZNF853P0CG23 659 aa10.69□□□□□ -0.7
NECAP1-202ENST00000450991 CALD1Q05682 793 aaKnown RBP10.69□□□□□ -0.7
NECAP1-202ENST00000450991 EXOSC9Q06265 439 aaKnown RBP10.68□□□□□ -0.7
NECAP1-202ENST00000450991 CRBNQ96SW2 442 aa10.68□□□□□ -0.7
NECAP1-202ENST00000450991 IFT57Q9NWB7 429 aa10.68□□□□□ -0.7
NECAP1-202ENST00000450991 CPDO75976 1380 aa10.68□□□□□ -0.7
NECAP1-202ENST00000450991 GNAI1P63096 354 aa10.67□□□□□ -0.7
NECAP1-202ENST00000450991 GAS2L2Q8NHY3 880 aa10.66□□□□□ -0.7
NECAP1-202ENST00000450991 CRB1P82279 1406 aa10.66□□□□□ -0.7
NECAP1-202ENST00000450991 CCDC136Q96JN2 1154 aa10.66□□□□□ -0.7
NECAP1-202ENST00000450991 CFAP44Q96MT7 982 aa10.66□□□□□ -0.7
NECAP1-202ENST00000450991 STRN4Q9NRL3 753 aa10.66□□□□□ -0.7
NECAP1-202ENST00000450991 AHDC1Q5TGY3 1603 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-202ENST00000450991 CERKQ8TCT0 537 aa10.65□□□□□ -0.7
NECAP1-202ENST00000450991 RTF1Q92541 710 aaKnown RBP10.65□□□□□ -0.7
NECAP1-202ENST00000450991 SIPA1L3O60292 1781 aaPredicted RBP10.65□□□□□ -0.7
NECAP1-202ENST00000450991 KCNA4P22459 653 aa10.65□□□□□ -0.71
NECAP1-202ENST00000450991 PDE3AQ14432 1141 aa10.65□□□□□ -0.71
NECAP1-202ENST00000450991 BCL2L13Q9BXK5 485 aa10.65□□□□□ -0.71
NECAP1-202ENST00000450991 MBIPQ9NS73 344 aa10.65□□□□□ -0.71
NECAP1-202ENST00000450991 KDM3BQ7LBC6 1761 aa10.65□□□□□ -0.71
NECAP1-202ENST00000450991 ADAMTS7Q9UKP4 1686 aa10.64□□□□□ -0.71
NECAP1-202ENST00000450991 NUTM2BA6NNL0 878 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-202ENST00000450991 NUTM2EB1AL46 878 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-202ENST00000450991 ADAMTS2O95450 1211 aa10.64□□□□□ -0.71
NECAP1-202ENST00000450991 NUTM2AQ8IVF1 878 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-202ENST00000450991 MIS18AQ9NYP9 233 aa10.64□□□□□ -0.71
NECAP1-202ENST00000450991 CACNA1FO60840 1977 aa10.64□□□□□ -0.71
NECAP1-202ENST00000450991 TOM1L2Q6ZVM7 507 aa10.64□□□□□ -0.71
NECAP1-202ENST00000450991 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
NECAP1-202ENST00000450991 GNAT3A8MTJ3 354 aa10.63□□□□□ -0.71
NECAP1-202ENST00000450991 ZNF530Q6P9A1 599 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-202ENST00000450991 PKD1L3Q7Z443 1732 aa10.63□□□□□ -0.71
NECAP1-202ENST00000450991 SCN11AQ9UI33 1791 aa10.63□□□□□ -0.71
NECAP1-202ENST00000450991 ELL2O00472 640 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-202ENST00000450991 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
NECAP1-202ENST00000450991 EVA1CP58658 441 aa10.63□□□□□ -0.71
NECAP1-202ENST00000450991 LARP1Q6PKG0 1096 aaKnown RBP10.63□□□□□ -0.71
NECAP1-202ENST00000450991 SSH1Q8WYL5 1049 aa10.63□□□□□ -0.71
NECAP1-202ENST00000450991 RAPGEF4Q8WZA2 1011 aa10.63□□□□□ -0.71
NECAP1-202ENST00000450991 BTG4Q9NY30 223 aa10.63□□□□□ -0.71
NECAP1-202ENST00000450991 MAP3K5Q99683 1374 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 CHL1O00533 1208 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 ALDH1L2Q3SY69 923 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 PLEKHO1Q53GL0 409 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-202ENST00000450991 IL17REQ8NFR9 667 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 ZNF428Q96B54 188 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 USP35Q9P2H5 1018 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 WDR17Q8IZU2 1322 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 COL5A2P05997 1499 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-202ENST00000450991 VAMP4O75379 141 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 CANXP27824 592 aaKnown RBP10.62□□□□□ -0.71
NECAP1-202ENST00000450991 TSPYL6Q8N831 410 aa10.62□□□□□ -0.71
NECAP1-202ENST00000450991 COL22A1Q8NFW1 1626 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-202ENST00000450991 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-202ENST00000450991 KRT24Q2M2I5 525 aa10.61□□□□□ -0.71
NECAP1-202ENST00000450991 MPRIPQ6WCQ1 1025 aa10.61□□□□□ -0.71
NECAP1-202ENST00000450991 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-202ENST00000450991 LGR6Q9HBX8 967 aa10.61□□□□□ -0.71
NECAP1-202ENST00000450991 SMC4Q9NTJ3 1288 aa10.61□□□□□ -0.71
NECAP1-202ENST00000450991 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
NECAP1-202ENST00000450991 TNNQ9UQP3 1299 aa10.61□□□□□ -0.71
NECAP1-202ENST00000450991 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
NECAP1-202ENST00000450991 MEGF6O75095 1541 aa10.61□□□□□ -0.71
NECAP1-202ENST00000450991 COL16A1Q07092 1604 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-202ENST00000450991 PHLPP1O60346 1717 aa10.61□□□□□ -0.71
NECAP1-202ENST00000450991 TATP17735 454 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-202ENST00000450991 PANK1Q8TE04 598 aa10.6□□□□□ -0.71
NECAP1-202ENST00000450991 RLBP1P12271 317 aa10.6□□□□□ -0.71
NECAP1-202ENST00000450991 AMOTQ4VCS5 1084 aa10.6□□□□□ -0.71
NECAP1-202ENST00000450991 C8orf58Q8NAV2 365 aa10.6□□□□□ -0.71
NECAP1-202ENST00000450991 TCERG1O14776 1098 aaKnown RBP10.59□□□□□ -0.71
NECAP1-202ENST00000450991 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
NECAP1-202ENST00000450991 ZKSCAN2Q63HK3 967 aa10.59□□□□□ -0.71
NECAP1-202ENST00000450991 TSPYL4Q9UJ04 414 aa10.59□□□□□ -0.71
NECAP1-202ENST00000450991 CEMIPQ8WUJ3 1361 aa10.59□□□□□ -0.71
NECAP1-202ENST00000450991 TWISTNBQ3B726 338 aaPredicted RBP10.59□□□□□ -0.71
NECAP1-202ENST00000450991 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
NECAP1-202ENST00000450991 KIF16BQ96L93 1317 aa10.58□□□□□ -0.72
NECAP1-202ENST00000450991 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
NECAP1-202ENST00000450991 N4BP2Q86UW6 1770 aaPredicted RBP10.58□□□□□ -0.72
NECAP1-202ENST00000450991 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
NECAP1-202ENST00000450991 OVOS2A0A0G2JMS6 1433 aa10.58□□□□□ -0.72
NECAP1-202ENST00000450991 MRPL50Q8N5N7 158 aaKnown RBP10.58□□□□□ -0.72
NECAP1-202ENST00000450991 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
NECAP1-202ENST00000450991 PLEKHG2Q9H7P9 1386 aa10.57□□□□□ -0.72
NECAP1-202ENST00000450991 KDM2BQ8NHM5 1336 aa10.57□□□□□ -0.72
NECAP1-202ENST00000450991 TRIM27P14373 513 aa10.57□□□□□ -0.72
NECAP1-202ENST00000450991 ATF7IPQ6VMQ6 1270 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms