RNA–Protein interactions for RNA: ENST00000450844.1

GPATCH3-203, Transcript of G-patch domain containing 3, humanhuman

TSL 2

Gene GPATCH3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-203ENST00000450844 FHDC1Q9C0D6 1143 aaPredicted RBP24.16■■□□□ 1.46
GPATCH3-203ENST00000450844 GGNBP2Q9H3C7 697 aa24.16■■□□□ 1.46
GPATCH3-203ENST00000450844 UTRNP46939 3433 aa24.16■■□□□ 1.46
GPATCH3-203ENST00000450844 CCER1Q8TC90 406 aaPredicted RBP24.15■■□□□ 1.46
GPATCH3-203ENST00000450844 AKT1S1Q96B36 256 aa24.15■■□□□ 1.46
GPATCH3-203ENST00000450844 SLC24A1O60721 1099 aa24.14■■□□□ 1.45
GPATCH3-203ENST00000450844 SYT17Q9BSW7 474 aa24.14■■□□□ 1.45
GPATCH3-203ENST00000450844 TMF1P82094 1093 aa24.13■■□□□ 1.45
GPATCH3-203ENST00000450844 NBPF6Q5VWK0 638 aa24.13■■□□□ 1.45
GPATCH3-203ENST00000450844 NBPF4Q96M43 638 aa24.13■■□□□ 1.45
GPATCH3-203ENST00000450844 PRIM1P49642 420 aaKnown RBP24.11■■□□□ 1.45
GPATCH3-203ENST00000450844 KCNQ4P56696 695 aa24.11■■□□□ 1.45
GPATCH3-203ENST00000450844 USHBP1Q8N6Y0 703 aa24.11■■□□□ 1.45
GPATCH3-203ENST00000450844 ZCRB1Q8TBF4 217 aaKnown RBP24.11■■□□□ 1.45
GPATCH3-203ENST00000450844 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
GPATCH3-203ENST00000450844 SLC27A3Q5K4L6 730 aa24.1■■□□□ 1.45
GPATCH3-203ENST00000450844 PNPLA7Q6ZV29 1317 aa24.1■■□□□ 1.45
GPATCH3-203ENST00000450844 MAP3K5Q99683 1374 aa24.09■■□□□ 1.45
GPATCH3-203ENST00000450844 DCAF8L1A6NGE4 600 aa24.09■■□□□ 1.45
GPATCH3-203ENST00000450844 TOGARAM1Q9Y4F4 1720 aa24.09■■□□□ 1.45
GPATCH3-203ENST00000450844 SYTL4Q96C24 671 aaPredicted RBP24.08■■□□□ 1.45
GPATCH3-203ENST00000450844 ARXQ96QS3 562 aa24.08■■□□□ 1.45
GPATCH3-203ENST00000450844 INSRP06213 1382 aa24.07■■□□□ 1.44
GPATCH3-203ENST00000450844 HSP90AB2PQ58FF8 381 aa24.07■■□□□ 1.44
GPATCH3-203ENST00000450844 CARD14Q9BXL6 1004 aa24.07■■□□□ 1.44
GPATCH3-203ENST00000450844 SMG6Q86US8 1419 aaKnown RBP24.07■■□□□ 1.44
GPATCH3-203ENST00000450844 PKD1L3Q7Z443 1732 aa24.07■■□□□ 1.44
GPATCH3-203ENST00000450844 C5P01031 1676 aa24.05■■□□□ 1.44
GPATCH3-203ENST00000450844 FLT4P35916 1363 aa24.05■■□□□ 1.44
GPATCH3-203ENST00000450844 CHD4Q14839 1912 aa24.05■■□□□ 1.44
GPATCH3-203ENST00000450844 NSD3Q9BZ95 1437 aa24.04■■□□□ 1.44
GPATCH3-203ENST00000450844 CGNL1Q0VF96 1302 aa24.04■■□□□ 1.44
GPATCH3-203ENST00000450844 KIF24Q5T7B8 1368 aa24.03■■□□□ 1.44
GPATCH3-203ENST00000450844 TAF1LQ8IZX4 1826 aa24.03■■□□□ 1.44
GPATCH3-203ENST00000450844 ITGB4P16144 1822 aa24.03■■□□□ 1.44
GPATCH3-203ENST00000450844 NCAPD2Q15021 1401 aa24.02■■□□□ 1.44
GPATCH3-203ENST00000450844 TIMELESSQ9UNS1 1208 aa24.02■■□□□ 1.44
GPATCH3-203ENST00000450844 EMILIN1Q9Y6C2 1016 aa24.01■■□□□ 1.43
GPATCH3-203ENST00000450844 CDCA8Q53HL2 280 aa24■■□□□ 1.43
GPATCH3-203ENST00000450844 SLC16A10Q8TF71 515 aa24■■□□□ 1.43
GPATCH3-203ENST00000450844 RAPGEF4Q8WZA2 1011 aa24■■□□□ 1.43
GPATCH3-203ENST00000450844 TFCP2L1Q9NZI6 479 aa24■■□□□ 1.43
GPATCH3-203ENST00000450844 CCNL1Q9UK58 526 aaPredicted RBP24■■□□□ 1.43
GPATCH3-203ENST00000450844 MAP2P11137 1827 aaKnown RBP23.98■■□□□ 1.43
GPATCH3-203ENST00000450844 TATP17735 454 aaPredicted RBP23.98■■□□□ 1.43
GPATCH3-203ENST00000450844 PCDH11XQ9BZA7 1347 aa23.98■■□□□ 1.43
GPATCH3-203ENST00000450844 PCDH11YQ9BZA8 1340 aa23.98■■□□□ 1.43
GPATCH3-203ENST00000450844 CYP27B1O15528 508 aa23.97■■□□□ 1.43
GPATCH3-203ENST00000450844 ZNF784Q8NCA9 323 aaPredicted RBP23.95■■□□□ 1.42
GPATCH3-203ENST00000450844 COL23A1Q86Y22 540 aaPredicted RBP23.94■■□□□ 1.42
GPATCH3-203ENST00000450844 PALLDQ8WX93 1383 aa23.93■■□□□ 1.42
GPATCH3-203ENST00000450844 C4BP0C0L5 1744 aa23.93■■□□□ 1.42
GPATCH3-203ENST00000450844 POLD1P28340 1107 aa23.92■■□□□ 1.42
GPATCH3-203ENST00000450844 NLGN2Q8NFZ4 835 aa23.92■■□□□ 1.42
GPATCH3-203ENST00000450844 GOLGB1Q14789 3259 aaKnown RBP23.91■■□□□ 1.42
GPATCH3-203ENST00000450844 KLHL34Q8N239 644 aa23.91■■□□□ 1.42
GPATCH3-203ENST00000450844 UBR3Q6ZT12 1888 aa23.9■■□□□ 1.42
GPATCH3-203ENST00000450844 MPRIPQ6WCQ1 1025 aa23.89■■□□□ 1.41
GPATCH3-203ENST00000450844 WASHC2AQ641Q2 1341 aa23.88■■□□□ 1.41
GPATCH3-203ENST00000450844 PPM1GO15355 546 aaPredicted RBP23.87■■□□□ 1.41
GPATCH3-203ENST00000450844 AMIGO3Q86WK7 504 aa23.87■■□□□ 1.41
GPATCH3-203ENST00000450844 NKX1-1Q15270 411 aaPredicted RBP23.86■■□□□ 1.41
GPATCH3-203ENST00000450844 GPR162Q16538 588 aa23.86■■□□□ 1.41
GPATCH3-203ENST00000450844 MSL1Q68DK7 614 aa23.86■■□□□ 1.41
GPATCH3-203ENST00000450844 EYA1Q99502 592 aa23.86■■□□□ 1.41
GPATCH3-203ENST00000450844 POLKQ9UBT6 870 aa23.86■■□□□ 1.41
GPATCH3-203ENST00000450844 MSH5O43196 834 aa23.84■■□□□ 1.41
GPATCH3-203ENST00000450844 PIGBQ92521 554 aa23.84■■□□□ 1.41
GPATCH3-203ENST00000450844 YBX3P16989 372 aaKnown RBP eCLIP23.81■■□□□ 1.4
GPATCH3-203ENST00000450844 SMIM5Q71RC9 77 aa23.8■■□□□ 1.4
GPATCH3-203ENST00000450844 PELP1Q8IZL8 1130 aaKnown RBP23.8■■□□□ 1.4
GPATCH3-203ENST00000450844 SPG7Q9UQ90 795 aa23.8■■□□□ 1.4
GPATCH3-203ENST00000450844 EIF4A2Q14240 407 aaKnown RBP23.79■■□□□ 1.4
GPATCH3-203ENST00000450844 SMARCC1Q92922 1105 aaPredicted RBP23.79■■□□□ 1.4
GPATCH3-203ENST00000450844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.79■■□□□ 1.4
GPATCH3-203ENST00000450844 PHKG2P15735 406 aa23.78■■□□□ 1.4
GPATCH3-203ENST00000450844 POLR3GLQ9BT43 218 aa23.78■■□□□ 1.4
GPATCH3-203ENST00000450844 TNNT2P45379 298 aaPredicted RBP23.77■■□□□ 1.4
GPATCH3-203ENST00000450844 LINC00116Q8NCU8 138 aa23.77■■□□□ 1.4
GPATCH3-203ENST00000450844 FLAD1Q8NFF5 587 aa23.76■■□□□ 1.39
GPATCH3-203ENST00000450844 HSPA5P11021 654 aaKnown RBP23.75■■□□□ 1.39
GPATCH3-203ENST00000450844 AK7Q96M32 723 aa23.75■■□□□ 1.39
GPATCH3-203ENST00000450844 ASAP1Q9ULH1 1129 aa23.75■■□□□ 1.39
GPATCH3-203ENST00000450844 IGSF1Q8N6C5 1336 aa23.75■■□□□ 1.39
GPATCH3-203ENST00000450844 LOC102724428A0A0B4J2F2 783 aa23.74■■□□□ 1.39
GPATCH3-203ENST00000450844 SIK1P57059 783 aa23.74■■□□□ 1.39
GPATCH3-203ENST00000450844 ITPK1Q13572 414 aa23.74■■□□□ 1.39
GPATCH3-203ENST00000450844 KDRP35968 1356 aa23.74■■□□□ 1.39
GPATCH3-203ENST00000450844 PLEKHG2Q9H7P9 1386 aa23.74■■□□□ 1.39
GPATCH3-203ENST00000450844 ZNF831Q5JPB2 1677 aa23.73■■□□□ 1.39
GPATCH3-203ENST00000450844 COL5A3P25940 1745 aaPredicted RBP23.73■■□□□ 1.39
GPATCH3-203ENST00000450844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.73■■□□□ 1.39
GPATCH3-203ENST00000450844 PHF14O94880 888 aa23.73■■□□□ 1.39
GPATCH3-203ENST00000450844 IFNL2Q8IZJ0 200 aa23.73■■□□□ 1.39
GPATCH3-203ENST00000450844 TMOD3Q9NYL9 352 aa23.73■■□□□ 1.39
GPATCH3-203ENST00000450844 EIF4G2P78344 907 aaKnown RBP eCLIP23.72■■□□□ 1.39
GPATCH3-203ENST00000450844 CD2APQ9Y5K6 639 aa23.72■■□□□ 1.39
GPATCH3-203ENST00000450844 PANK3Q9H999 370 aa23.71■■□□□ 1.39
GPATCH3-203ENST00000450844 ATG3Q9NT62 314 aa23.71■■□□□ 1.39
GPATCH3-203ENST00000450844 KDM6AO15550 1401 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms