RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 SLC15A2Q16348 729 aa30.22■■■□□ 2.43
CPSF7-208ENST00000450000 EMILIN1Q9Y6C2 1016 aa30.22■■■□□ 2.43
CPSF7-208ENST00000450000 NHSQ6T4R5 1651 aa30.21■■■□□ 2.43
CPSF7-208ENST00000450000 PRIM1P49642 420 aaKnown RBP30.19■■■□□ 2.42
CPSF7-208ENST00000450000 MYOM1P52179 1685 aa30.18■■■□□ 2.42
CPSF7-208ENST00000450000 MEGF6O75095 1541 aa30.17■■■□□ 2.42
CPSF7-208ENST00000450000 TNNT2P45379 298 aaPredicted RBP30.17■■■□□ 2.42
CPSF7-208ENST00000450000 DCAF8L1A6NGE4 600 aa30.16■■■□□ 2.42
CPSF7-208ENST00000450000 ZBTB7AO95365 584 aa30.16■■■□□ 2.42
CPSF7-208ENST00000450000 PANK3Q9H999 370 aa30.16■■■□□ 2.42
CPSF7-208ENST00000450000 KAT6BQ8WYB5 2073 aa30.16■■■□□ 2.42
CPSF7-208ENST00000450000 SLC27A3Q5K4L6 730 aa30.14■■■□□ 2.42
CPSF7-208ENST00000450000 PCDH11XQ9BZA7 1347 aa30.14■■■□□ 2.42
CPSF7-208ENST00000450000 PCDH11YQ9BZA8 1340 aa30.14■■■□□ 2.42
CPSF7-208ENST00000450000 ATF5Q9Y2D1 282 aaPredicted RBP30.12■■■□□ 2.41
CPSF7-208ENST00000450000 WASHC2AQ641Q2 1341 aa30.12■■■□□ 2.41
CPSF7-208ENST00000450000 PDGFDQ9GZP0 370 aaPredicted RBP30.1■■■□□ 2.41
CPSF7-208ENST00000450000 RGPD2P0DJD1 1756 aa30.1■■■□□ 2.41
CPSF7-208ENST00000450000 POLKQ9UBT6 870 aa30.09■■■□□ 2.41
CPSF7-208ENST00000450000 BTAF1O14981 1849 aa30.08■■■□□ 2.41
CPSF7-208ENST00000450000 SPG7Q9UQ90 795 aa30.08■■■□□ 2.41
CPSF7-208ENST00000450000 MTFR1LQ9H019 292 aa30.07■■■□□ 2.4
CPSF7-208ENST00000450000 LRRC4BQ9NT99 713 aa30.07■■■□□ 2.4
CPSF7-208ENST00000450000 KNSTRNQ9Y448 316 aa30.07■■■□□ 2.4
CPSF7-208ENST00000450000 MORC1Q86VD1 984 aa30.05■■■□□ 2.4
CPSF7-208ENST00000450000 CCNL1Q9UK58 526 aaPredicted RBP30.05■■■□□ 2.4
CPSF7-208ENST00000450000 TFCP2L1Q9NZI6 479 aa30.04■■■□□ 2.4
CPSF7-208ENST00000450000 NSD2O96028 1365 aa30.03■■■□□ 2.4
CPSF7-208ENST00000450000 HMGB2P26583 209 aaKnown RBP30.03■■■□□ 2.4
CPSF7-208ENST00000450000 EYA1Q99502 592 aa30.03■■■□□ 2.4
CPSF7-208ENST00000450000 ZNF827Q17R98 1081 aa30.02■■■□□ 2.4
CPSF7-208ENST00000450000 MPRIPQ6WCQ1 1025 aa30.02■■■□□ 2.4
CPSF7-208ENST00000450000 KCNQ4P56696 695 aa30■■■□□ 2.39
CPSF7-208ENST00000450000 DOT1LQ8TEK3 1739 aa29.99■■■□□ 2.39
CPSF7-208ENST00000450000 CYP27B1O15528 508 aa29.99■■■□□ 2.39
CPSF7-208ENST00000450000 CASZ1Q86V15 1759 aa29.99■■■□□ 2.39
CPSF7-208ENST00000450000 EIF4A2Q14240 407 aaKnown RBP29.98■■■□□ 2.39
CPSF7-208ENST00000450000 AKT1S1Q96B36 256 aa29.98■■■□□ 2.39
CPSF7-208ENST00000450000 PTGER2P43116 358 aa29.97■■■□□ 2.39
CPSF7-208ENST00000450000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.96■■■□□ 2.394e-9■■■□□ 15.2
CPSF7-208ENST00000450000 MSH5O43196 834 aa29.95■■■□□ 2.39
CPSF7-208ENST00000450000 SLC16A10Q8TF71 515 aa29.95■■■□□ 2.39
CPSF7-208ENST00000450000 SMARCC1Q92922 1105 aaPredicted RBP29.95■■■□□ 2.39
CPSF7-208ENST00000450000 SHANK3Q9BYB0 1731 aa29.94■■■□□ 2.38
CPSF7-208ENST00000450000 POLD1P28340 1107 aa29.94■■■□□ 2.38
CPSF7-208ENST00000450000 IFNL2Q8IZJ0 200 aa29.94■■■□□ 2.38
CPSF7-208ENST00000450000 MAP2P11137 1827 aaKnown RBP29.94■■■□□ 2.38
CPSF7-208ENST00000450000 ARXQ96QS3 562 aa29.92■■■□□ 2.38
CPSF7-208ENST00000450000 PAPPAQ13219 1627 aa29.92■■■□□ 2.38
CPSF7-208ENST00000450000 KIF7Q2M1P5 1343 aa29.91■■■□□ 2.38
CPSF7-208ENST00000450000 PALLDQ8WX93 1383 aa29.9■■■□□ 2.38
CPSF7-208ENST00000450000 NCAPD2Q15021 1401 aa29.9■■■□□ 2.38
CPSF7-208ENST00000450000 FHDC1Q9C0D6 1143 aaPredicted RBP29.9■■■□□ 2.38
CPSF7-208ENST00000450000 TMOD3Q9NYL9 352 aa29.9■■■□□ 2.38
CPSF7-208ENST00000450000 ANKRD26Q9UPS8 1709 aa29.9■■■□□ 2.38
CPSF7-208ENST00000450000 NKX1-1Q15270 411 aaPredicted RBP29.89■■■□□ 2.38
CPSF7-208ENST00000450000 PNPLA7Q6ZV29 1317 aa29.89■■■□□ 2.38
CPSF7-208ENST00000450000 PHKG2P15735 406 aa29.87■■■□□ 2.37
CPSF7-208ENST00000450000 PLEKHO1Q53GL0 409 aaPredicted RBP29.87■■■□□ 2.37
CPSF7-208ENST00000450000 KLHL34Q8N239 644 aa29.87■■■□□ 2.37
CPSF7-208ENST00000450000 PIGBQ92521 554 aa29.86■■■□□ 2.37
CPSF7-208ENST00000450000 SYT17Q9BSW7 474 aa29.86■■■□□ 2.37
CPSF7-208ENST00000450000 IGSF1Q8N6C5 1336 aa29.86■■■□□ 2.37
CPSF7-208ENST00000450000 SGIP1Q9BQI5 828 aa29.85■■■□□ 2.37
CPSF7-208ENST00000450000 HSP90AB1P08238 724 aaKnown RBP29.84■■■□□ 2.37
CPSF7-208ENST00000450000 YY1P25490 414 aa29.83■■■□□ 2.37
CPSF7-208ENST00000450000 AMOTQ4VCS5 1084 aa29.83■■■□□ 2.37
CPSF7-208ENST00000450000 FLAD1Q8NFF5 587 aa29.83■■■□□ 2.37
CPSF7-208ENST00000450000 AK7Q96M32 723 aa29.83■■■□□ 2.37
CPSF7-208ENST00000450000 LY75O60449 1722 aa29.82■■■□□ 2.36
CPSF7-208ENST00000450000 PKD1L3Q7Z443 1732 aa29.82■■■□□ 2.36
CPSF7-208ENST00000450000 PLEKHG2Q9H7P9 1386 aa29.81■■■□□ 2.36
CPSF7-208ENST00000450000 AMER1Q5JTC6 1135 aaPredicted RBP29.81■■■□□ 2.36
CPSF7-208ENST00000450000 C1orf141Q5JVX7 400 aa29.79■■■□□ 2.36
CPSF7-208ENST00000450000 CC2D1BQ5T0F9 858 aaKnown RBP29.79■■■□□ 2.36
CPSF7-208ENST00000450000 ZNF530Q6P9A1 599 aaPredicted RBP29.79■■■□□ 2.36
CPSF7-208ENST00000450000 SULT6B1Q6IMI4 303 aa29.78■■■□□ 2.36
CPSF7-208ENST00000450000 COL23A1Q86Y22 540 aaPredicted RBP29.78■■■□□ 2.36
CPSF7-208ENST00000450000 LOC102724428A0A0B4J2F2 783 aa29.77■■■□□ 2.36
CPSF7-208ENST00000450000 SIK1P57059 783 aa29.77■■■□□ 2.36
CPSF7-208ENST00000450000 CNGB1Q14028 1251 aaPredicted RBP29.77■■■□□ 2.36
CPSF7-208ENST00000450000 DCAF5Q96JK2 942 aa29.77■■■□□ 2.36
CPSF7-208ENST00000450000 ERVV-2B6SEH9 535 aa29.74■■■□□ 2.35
CPSF7-208ENST00000450000 ATP6V1AP38606 617 aa29.74■■■□□ 2.35
CPSF7-208ENST00000450000 MTHFSP49914 203 aa29.74■■■□□ 2.35
CPSF7-208ENST00000450000 AEBP1Q8IUX7 1158 aa29.74■■■□□ 2.35
CPSF7-208ENST00000450000 ASAP1Q9ULH1 1129 aa29.74■■■□□ 2.35
CPSF7-208ENST00000450000 CABP4P57796 275 aa29.73■■■□□ 2.35
CPSF7-208ENST00000450000 QSER1Q2KHR3 1735 aa29.72■■■□□ 2.35
CPSF7-208ENST00000450000 PHF14O94880 888 aa29.72■■■□□ 2.35
CPSF7-208ENST00000450000 IL13P35225 146 aa29.72■■■□□ 2.35
CPSF7-208ENST00000450000 MSL1Q68DK7 614 aa29.72■■■□□ 2.35
CPSF7-208ENST00000450000 TOGARAM1Q9Y4F4 1720 aa29.71■■■□□ 2.35
CPSF7-208ENST00000450000 MAP3K5Q99683 1374 aa29.7■■■□□ 2.35
CPSF7-208ENST00000450000 PER1O15534 1290 aaPredicted RBP29.7■■■□□ 2.35
CPSF7-208ENST00000450000 GPR162Q16538 588 aa29.7■■■□□ 2.35
CPSF7-208ENST00000450000 RBM42Q9BTD8 480 aaKnown RBP29.7■■■□□ 2.35
CPSF7-208ENST00000450000 ATG3Q9NT62 314 aa29.7■■■□□ 2.35
CPSF7-208ENST00000450000 PELP1Q8IZL8 1130 aaKnown RBP29.69■■■□□ 2.34
CPSF7-208ENST00000450000 ITGB4P16144 1822 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms