RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 COL24A1Q17RW2 1714 aa11.94□□□□□ -0.5
LINC01961-201ENST00000449954 COL13A1Q5TAT6 717 aaPredicted RBP11.94□□□□□ -0.5
LINC01961-201ENST00000449954 SLC16A10Q8TF71 515 aa11.94□□□□□ -0.5
LINC01961-201ENST00000449954 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
LINC01961-201ENST00000449954 IER5LQ5T953 404 aa11.93□□□□□ -0.5
LINC01961-201ENST00000449954 PTF1AQ7RTS3 328 aa11.93□□□□□ -0.5
LINC01961-201ENST00000449954 ITSN1Q15811 1721 aa11.93□□□□□ -0.5
LINC01961-201ENST00000449954 WNK3Q9BYP7 1800 aa11.93□□□□□ -0.5
LINC01961-201ENST00000449954 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
LINC01961-201ENST00000449954 SAFB2Q14151 953 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC01961-201ENST00000449954 DNAJC5GQ8N7S2 189 aa11.92□□□□□ -0.5
LINC01961-201ENST00000449954 COLQQ9Y215 455 aaPredicted RBP11.92□□□□□ -0.5
LINC01961-201ENST00000449954 PCNTO95613 3336 aa11.92□□□□□ -0.5
LINC01961-201ENST00000449954 SPATA31E1Q6ZUB1 1445 aa11.92□□□□□ -0.5
LINC01961-201ENST00000449954 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
LINC01961-201ENST00000449954 PRR36Q9H6K5 1346 aa11.91□□□□□ -0.5
LINC01961-201ENST00000449954 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
LINC01961-201ENST00000449954 YBX3P16989 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC01961-201ENST00000449954 POGKQ9P215 609 aa11.91□□□□□ -0.5
LINC01961-201ENST00000449954 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
LINC01961-201ENST00000449954 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
LINC01961-201ENST00000449954 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
LINC01961-201ENST00000449954 NHSQ6T4R5 1651 aa11.9□□□□□ -0.5
LINC01961-201ENST00000449954 ZNF526Q8TF50 670 aaPredicted RBP11.89□□□□□ -0.51
LINC01961-201ENST00000449954 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
LINC01961-201ENST00000449954 USP19O94966 1318 aa11.88□□□□□ -0.51
LINC01961-201ENST00000449954 MARCH10Q8NA82 808 aaPredicted RBP11.88□□□□□ -0.51
LINC01961-201ENST00000449954 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
LINC01961-201ENST00000449954 WDR90Q96KV7 1748 aa11.87□□□□□ -0.51
LINC01961-201ENST00000449954 KIF3CO14782 793 aa11.87□□□□□ -0.51
LINC01961-201ENST00000449954 ITGAEP38570 1179 aa11.87□□□□□ -0.51
LINC01961-201ENST00000449954 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
LINC01961-201ENST00000449954 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
LINC01961-201ENST00000449954 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
LINC01961-201ENST00000449954 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
LINC01961-201ENST00000449954 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
LINC01961-201ENST00000449954 PLCG2P16885 1265 aa11.86□□□□□ -0.51
LINC01961-201ENST00000449954 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
LINC01961-201ENST00000449954 ZNF827Q17R98 1081 aa11.86□□□□□ -0.51
LINC01961-201ENST00000449954 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
LINC01961-201ENST00000449954 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
LINC01961-201ENST00000449954 ARHGEF28Q8N1W1 1705 aaKnown RBP11.85□□□□□ -0.51
LINC01961-201ENST00000449954 POLR3AO14802 1390 aaPredicted RBP11.84□□□□□ -0.51
LINC01961-201ENST00000449954 TOMM70O94826 608 aa11.84□□□□□ -0.51
LINC01961-201ENST00000449954 TOM1L2Q6ZVM7 507 aa11.84□□□□□ -0.51
LINC01961-201ENST00000449954 KLRG1Q96E93 195 aa11.84□□□□□ -0.51
LINC01961-201ENST00000449954 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
LINC01961-201ENST00000449954 RIOK3O14730 519 aaKnown RBP11.83□□□□□ -0.52
LINC01961-201ENST00000449954 ECM2O94769 699 aaPredicted RBP11.83□□□□□ -0.52
LINC01961-201ENST00000449954 GCP02774 474 aa11.83□□□□□ -0.52
LINC01961-201ENST00000449954 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
LINC01961-201ENST00000449954 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.52
LINC01961-201ENST00000449954 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
LINC01961-201ENST00000449954 CFAP70Q5T0N1 1121 aa11.82□□□□□ -0.52
LINC01961-201ENST00000449954 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
LINC01961-201ENST00000449954 ABTB2Q8N961 1025 aa11.82□□□□□ -0.52
LINC01961-201ENST00000449954 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
LINC01961-201ENST00000449954 PNPLA7Q6ZV29 1317 aa11.82□□□□□ -0.52
LINC01961-201ENST00000449954 WDR17Q8IZU2 1322 aa11.82□□□□□ -0.52
LINC01961-201ENST00000449954 ADGRB1O14514 1584 aa11.81□□□□□ -0.52
LINC01961-201ENST00000449954 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
LINC01961-201ENST00000449954 WWC3Q9ULE0 1092 aa11.81□□□□□ -0.52
LINC01961-201ENST00000449954 TRPM1Q7Z4N2 1603 aa11.81□□□□□ -0.52
LINC01961-201ENST00000449954 BTAF1O14981 1849 aa11.81□□□□□ -0.52
LINC01961-201ENST00000449954 ABCC6O95255 1503 aa11.81□□□□□ -0.52
LINC01961-201ENST00000449954 EXOC5O00471 708 aa11.8□□□□□ -0.52
LINC01961-201ENST00000449954 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
LINC01961-201ENST00000449954 RNF25Q96BH1 459 aaPredicted RBP11.8□□□□□ -0.52
LINC01961-201ENST00000449954 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
LINC01961-201ENST00000449954 TUBGCP6Q96RT7 1819 aa11.79□□□□□ -0.52
LINC01961-201ENST00000449954 USP6P35125 1406 aa11.79□□□□□ -0.52
LINC01961-201ENST00000449954 NUDT16Q96DE0 195 aaKnown RBP11.79□□□□□ -0.52
LINC01961-201ENST00000449954 LRRC4BQ9NT99 713 aa11.79□□□□□ -0.52
LINC01961-201ENST00000449954 CD2APQ9Y5K6 639 aa11.79□□□□□ -0.52
LINC01961-201ENST00000449954 SLIT3O75094 1523 aa11.78□□□□□ -0.52
LINC01961-201ENST00000449954 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
LINC01961-201ENST00000449954 TFCP2L1Q9NZI6 479 aa11.78□□□□□ -0.52
LINC01961-201ENST00000449954 ACEP12821 1306 aa11.78□□□□□ -0.52
LINC01961-201ENST00000449954 CARD10Q9BWT7 1032 aa11.77□□□□□ -0.53
LINC01961-201ENST00000449954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01961-201ENST00000449954 TRAK1Q9UPV9 953 aa11.77□□□□□ -0.53
LINC01961-201ENST00000449954 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
LINC01961-201ENST00000449954 CCDC7Q96M83 1385 aa11.77□□□□□ -0.53
LINC01961-201ENST00000449954 COL18A1P39060 1754 aa11.77□□□□□ -0.53
LINC01961-201ENST00000449954 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
LINC01961-201ENST00000449954 PIK3C2AO00443 1686 aa11.75□□□□□ -0.53
LINC01961-201ENST00000449954 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
LINC01961-201ENST00000449954 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
LINC01961-201ENST00000449954 CPSF1Q10570 1443 aaKnown RBP11.75□□□□□ -0.53
LINC01961-201ENST00000449954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.74□□□□□ -0.53
LINC01961-201ENST00000449954 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
LINC01961-201ENST00000449954 FSTL1Q12841 308 aa11.74□□□□□ -0.53
LINC01961-201ENST00000449954 ZFP91Q96JP5 570 aaPredicted RBP11.74□□□□□ -0.53
LINC01961-201ENST00000449954 PPIP5K1Q6PFW1 1433 aa11.74□□□□□ -0.53
LINC01961-201ENST00000449954 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
LINC01961-201ENST00000449954 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
LINC01961-201ENST00000449954 HSPA1AP0DMV8 641 aaKnown RBP11.71□□□□□ -0.53
LINC01961-201ENST00000449954 HSPA1BP0DMV9 641 aaKnown RBP11.71□□□□□ -0.53
LINC01961-201ENST00000449954 HTRA3P83110 453 aa11.71□□□□□ -0.53
LINC01961-201ENST00000449954 C16orf71Q8IYS4 520 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms