RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 PANK3Q9H999 370 aa18.05■□□□□ 0.48
SEC22C-209ENST00000449617 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
SEC22C-209ENST00000449617 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
SEC22C-209ENST00000449617 DOT1LQ8TEK3 1739 aa18.03■□□□□ 0.48
SEC22C-209ENST00000449617 TXNRD1Q16881 649 aa18.03■□□□□ 0.48
SEC22C-209ENST00000449617 ZCRB1Q8TBF4 217 aaKnown RBP18.03■□□□□ 0.48
SEC22C-209ENST00000449617 RAPGEF4Q8WZA2 1011 aa18.02■□□□□ 0.48
SEC22C-209ENST00000449617 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
SEC22C-209ENST00000449617 POLKQ9UBT6 870 aa18■□□□□ 0.47
SEC22C-209ENST00000449617 WASHC2AQ641Q2 1341 aa17.99■□□□□ 0.47
SEC22C-209ENST00000449617 TATP17735 454 aaPredicted RBP17.99■□□□□ 0.47
SEC22C-209ENST00000449617 CASZ1Q86V15 1759 aa17.99■□□□□ 0.47
SEC22C-209ENST00000449617 NCAPD2Q15021 1401 aa17.99■□□□□ 0.47
SEC22C-209ENST00000449617 NSD2O96028 1365 aa17.99■□□□□ 0.47
SEC22C-209ENST00000449617 KIF7Q2M1P5 1343 aa17.98■□□□□ 0.47
SEC22C-209ENST00000449617 SYTL4Q96C24 671 aaPredicted RBP17.98■□□□□ 0.47
SEC22C-209ENST00000449617 PAPPAQ13219 1627 aa17.97■□□□□ 0.47
SEC22C-209ENST00000449617 PKD1L3Q7Z443 1732 aa17.97■□□□□ 0.47
SEC22C-209ENST00000449617 PRIM1P49642 420 aaKnown RBP17.97■□□□□ 0.47
SEC22C-209ENST00000449617 STK32BQ9NY57 414 aa17.97■□□□□ 0.47
SEC22C-209ENST00000449617 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
SEC22C-209ENST00000449617 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
SEC22C-209ENST00000449617 PDGFDQ9GZP0 370 aaPredicted RBP17.95■□□□□ 0.46
SEC22C-209ENST00000449617 SLC15A2Q16348 729 aa17.94■□□□□ 0.46
SEC22C-209ENST00000449617 EYA1Q99502 592 aa17.94■□□□□ 0.46
SEC22C-209ENST00000449617 SPON1Q9HCB6 807 aa17.94■□□□□ 0.46
SEC22C-209ENST00000449617 KNSTRNQ9Y448 316 aa17.94■□□□□ 0.46
SEC22C-209ENST00000449617 EIF4A2Q14240 407 aaKnown RBP17.93■□□□□ 0.46
SEC22C-209ENST00000449617 LRRC4BQ9NT99 713 aa17.93■□□□□ 0.46
SEC22C-209ENST00000449617 LY75O60449 1722 aa17.93■□□□□ 0.46
SEC22C-209ENST00000449617 CYP27B1O15528 508 aa17.92■□□□□ 0.46
SEC22C-209ENST00000449617 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
SEC22C-209ENST00000449617 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
SEC22C-209ENST00000449617 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
SEC22C-209ENST00000449617 ZBTB7AO95365 584 aa17.89■□□□□ 0.46
SEC22C-209ENST00000449617 ZNF827Q17R98 1081 aa17.89■□□□□ 0.46
SEC22C-209ENST00000449617 AMER1Q5JTC6 1135 aaPredicted RBP17.89■□□□□ 0.46
SEC22C-209ENST00000449617 ITGB4P16144 1822 aa17.89■□□□□ 0.45
SEC22C-209ENST00000449617 KCNQ4P56696 695 aa17.89■□□□□ 0.45
SEC22C-209ENST00000449617 PPP1R1BQ9UD71 204 aaPredicted RBP17.89■□□□□ 0.45
SEC22C-209ENST00000449617 SPG7Q9UQ90 795 aa17.88■□□□□ 0.45
SEC22C-209ENST00000449617 IGSF1Q8N6C5 1336 aa17.87■□□□□ 0.45
SEC22C-209ENST00000449617 TUBGCP6Q96RT7 1819 aa17.87■□□□□ 0.45
SEC22C-209ENST00000449617 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
SEC22C-209ENST00000449617 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
SEC22C-209ENST00000449617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
SEC22C-209ENST00000449617 CCNL1Q9UK58 526 aaPredicted RBP17.85■□□□□ 0.45
SEC22C-209ENST00000449617 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
SEC22C-209ENST00000449617 NKX1-1Q15270 411 aaPredicted RBP17.84■□□□□ 0.45
SEC22C-209ENST00000449617 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
SEC22C-209ENST00000449617 PER1O15534 1290 aaPredicted RBP17.83■□□□□ 0.45
SEC22C-209ENST00000449617 PTGER2P43116 358 aa17.83■□□□□ 0.45
SEC22C-209ENST00000449617 MTFR1LQ9H019 292 aa17.83■□□□□ 0.45
SEC22C-209ENST00000449617 PALLDQ8WX93 1383 aa17.83■□□□□ 0.44
SEC22C-209ENST00000449617 PLEKHG2Q9H7P9 1386 aa17.83■□□□□ 0.44
SEC22C-209ENST00000449617 PHKG2P15735 406 aa17.82■□□□□ 0.44
SEC22C-209ENST00000449617 C5P01031 1676 aa17.82■□□□□ 0.44
SEC22C-209ENST00000449617 CC2D1BQ5T0F9 858 aaKnown RBP17.81■□□□□ 0.44
SEC22C-209ENST00000449617 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
SEC22C-209ENST00000449617 IFNL2Q8IZJ0 200 aa17.81■□□□□ 0.44
SEC22C-209ENST00000449617 TAF1LQ8IZX4 1826 aa17.81■□□□□ 0.44
SEC22C-209ENST00000449617 PIGBQ92521 554 aa17.81■□□□□ 0.44
SEC22C-209ENST00000449617 TFCP2L1Q9NZI6 479 aa17.81■□□□□ 0.44
SEC22C-209ENST00000449617 PNPLA7Q6ZV29 1317 aa17.8■□□□□ 0.44
SEC22C-209ENST00000449617 IL13P35225 146 aa17.79■□□□□ 0.44
SEC22C-209ENST00000449617 SMARCC1Q92922 1105 aaPredicted RBP17.79■□□□□ 0.44
SEC22C-209ENST00000449617 SGIP1Q9BQI5 828 aa17.79■□□□□ 0.44
SEC22C-209ENST00000449617 MTHFSP49914 203 aa17.78■□□□□ 0.44
SEC22C-209ENST00000449617 TMOD3Q9NYL9 352 aa17.78■□□□□ 0.44
SEC22C-209ENST00000449617 KDRP35968 1356 aa17.77■□□□□ 0.44
SEC22C-209ENST00000449617 NPC1L1Q9UHC9 1359 aa17.77■□□□□ 0.44
SEC22C-209ENST00000449617 PLEKHO1Q53GL0 409 aaPredicted RBP17.77■□□□□ 0.44
SEC22C-209ENST00000449617 SULT6B1Q6IMI4 303 aa17.77■□□□□ 0.44
SEC22C-209ENST00000449617 CNGB1Q14028 1251 aaPredicted RBP17.76■□□□□ 0.43
SEC22C-209ENST00000449617 ZNF530Q6P9A1 599 aaPredicted RBP17.76■□□□□ 0.43
SEC22C-209ENST00000449617 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
SEC22C-209ENST00000449617 AMOTQ4VCS5 1084 aa17.75■□□□□ 0.43
SEC22C-209ENST00000449617 SLC16A10Q8TF71 515 aa17.75■□□□□ 0.43
SEC22C-209ENST00000449617 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
SEC22C-209ENST00000449617 FHDC1Q9C0D6 1143 aaPredicted RBP17.74■□□□□ 0.43
SEC22C-209ENST00000449617 ASAP1Q9ULH1 1129 aa17.74■□□□□ 0.43
SEC22C-209ENST00000449617 KDM6AO15550 1401 aaPredicted RBP17.74■□□□□ 0.43
SEC22C-209ENST00000449617 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
SEC22C-209ENST00000449617 DCAF5Q96JK2 942 aa17.73■□□□□ 0.43
SEC22C-209ENST00000449617 ARXQ96QS3 562 aa17.73■□□□□ 0.43
SEC22C-209ENST00000449617 LOC102724428A0A0B4J2F2 783 aa17.72■□□□□ 0.43
SEC22C-209ENST00000449617 SIK1P57059 783 aa17.72■□□□□ 0.43
SEC22C-209ENST00000449617 COL23A1Q86Y22 540 aaPredicted RBP17.72■□□□□ 0.43
SEC22C-209ENST00000449617 ERVV-2B6SEH9 535 aa17.72■□□□□ 0.43
SEC22C-209ENST00000449617 MSH5O43196 834 aa17.72■□□□□ 0.43
SEC22C-209ENST00000449617 C1orf141Q5JVX7 400 aa17.72■□□□□ 0.43
SEC22C-209ENST00000449617 ATG3Q9NT62 314 aa17.72■□□□□ 0.43
SEC22C-209ENST00000449617 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
SEC22C-209ENST00000449617 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
SEC22C-209ENST00000449617 HMGB2P26583 209 aaKnown RBP17.71■□□□□ 0.43
SEC22C-209ENST00000449617 DIAPH1O60610 1272 aaKnown RBP17.7■□□□□ 0.42
SEC22C-209ENST00000449617 HMOX1P09601 288 aa17.7■□□□□ 0.42
SEC22C-209ENST00000449617 POLD1P28340 1107 aa17.7■□□□□ 0.42
SEC22C-209ENST00000449617 AK7Q96M32 723 aa17.7■□□□□ 0.42
SEC22C-209ENST00000449617 SYT17Q9BSW7 474 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms