RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
LSP1P3-201ENST00000449530 BTAF1O14981 1849 aa16.29■□□□□ 0.2
LSP1P3-201ENST00000449530 EZH2Q15910 746 aaKnown RBP16.29■□□□□ 0.2
LSP1P3-201ENST00000449530 PARD3Q8TEW0 1356 aa16.28■□□□□ 0.2
LSP1P3-201ENST00000449530 PTF1AQ7RTS3 328 aa16.28■□□□□ 0.2
LSP1P3-201ENST00000449530 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
LSP1P3-201ENST00000449530 KAT6BQ8WYB5 2073 aa16.28■□□□□ 0.2
LSP1P3-201ENST00000449530 PER1O15534 1290 aaPredicted RBP16.27■□□□□ 0.2
LSP1P3-201ENST00000449530 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
LSP1P3-201ENST00000449530 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
LSP1P3-201ENST00000449530 CAMKK2Q96RR4 588 aa16.27■□□□□ 0.2
LSP1P3-201ENST00000449530 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
LSP1P3-201ENST00000449530 CNGB1Q14028 1251 aaPredicted RBP16.26■□□□□ 0.19
LSP1P3-201ENST00000449530 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
LSP1P3-201ENST00000449530 ACSBG1Q96GR2 724 aa16.26■□□□□ 0.19
LSP1P3-201ENST00000449530 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
LSP1P3-201ENST00000449530 ZCRB1Q8TBF4 217 aaKnown RBP16.25■□□□□ 0.19
LSP1P3-201ENST00000449530 EYA1Q99502 592 aa16.24■□□□□ 0.19
LSP1P3-201ENST00000449530 TOGARAM1Q9Y4F4 1720 aa16.24■□□□□ 0.19
LSP1P3-201ENST00000449530 NPC1L1Q9UHC9 1359 aa16.24■□□□□ 0.19
LSP1P3-201ENST00000449530 KCNQ2O43526 872 aa16.23■□□□□ 0.19
LSP1P3-201ENST00000449530 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
LSP1P3-201ENST00000449530 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
LSP1P3-201ENST00000449530 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.19
LSP1P3-201ENST00000449530 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
LSP1P3-201ENST00000449530 ITGB4P16144 1822 aa16.19■□□□□ 0.18
LSP1P3-201ENST00000449530 MTHFSP49914 203 aa16.19■□□□□ 0.18
LSP1P3-201ENST00000449530 PLSCR1O15162 318 aa16.18■□□□□ 0.18
LSP1P3-201ENST00000449530 SYTL4Q96C24 671 aaPredicted RBP16.18■□□□□ 0.18
LSP1P3-201ENST00000449530 COL3A1P02461 1466 aaPredicted RBP16.17■□□□□ 0.18
LSP1P3-201ENST00000449530 LY75O60449 1722 aa16.17■□□□□ 0.18
LSP1P3-201ENST00000449530 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
LSP1P3-201ENST00000449530 CYP27B1O15528 508 aa16.16■□□□□ 0.18
LSP1P3-201ENST00000449530 PRIM1P49642 420 aaKnown RBP16.16■□□□□ 0.18
LSP1P3-201ENST00000449530 AEBP1Q8IUX7 1158 aa16.16■□□□□ 0.18
LSP1P3-201ENST00000449530 SPG7Q9UQ90 795 aa16.16■□□□□ 0.18
LSP1P3-201ENST00000449530 PLEKHG2Q9H7P9 1386 aa16.15■□□□□ 0.18
LSP1P3-201ENST00000449530 IL13P35225 146 aa16.15■□□□□ 0.18
LSP1P3-201ENST00000449530 TXNRD1Q16881 649 aa16.15■□□□□ 0.18
LSP1P3-201ENST00000449530 PPP1R1BQ9UD71 204 aaPredicted RBP16.15■□□□□ 0.18
LSP1P3-201ENST00000449530 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
LSP1P3-201ENST00000449530 KDRP35968 1356 aa16.13■□□□□ 0.17
LSP1P3-201ENST00000449530 SULT6B1Q6IMI4 303 aa16.13■□□□□ 0.17
LSP1P3-201ENST00000449530 PROM2Q8N271 834 aa16.13■□□□□ 0.17
LSP1P3-201ENST00000449530 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
LSP1P3-201ENST00000449530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.17
LSP1P3-201ENST00000449530 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
LSP1P3-201ENST00000449530 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
LSP1P3-201ENST00000449530 PHKG2P15735 406 aa16.11■□□□□ 0.17
LSP1P3-201ENST00000449530 ZEB1P37275 1124 aaPredicted RBP16.11■□□□□ 0.17
LSP1P3-201ENST00000449530 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
LSP1P3-201ENST00000449530 IFNL2Q8IZJ0 200 aa16.1■□□□□ 0.17
LSP1P3-201ENST00000449530 C5P01031 1676 aa16.1■□□□□ 0.17
LSP1P3-201ENST00000449530 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
LSP1P3-201ENST00000449530 HMOX1P09601 288 aa16.09■□□□□ 0.17
LSP1P3-201ENST00000449530 PLEKHO1Q53GL0 409 aaPredicted RBP16.09■□□□□ 0.17
LSP1P3-201ENST00000449530 ZNF530Q6P9A1 599 aaPredicted RBP16.09■□□□□ 0.17
LSP1P3-201ENST00000449530 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
LSP1P3-201ENST00000449530 PPP2R1AP30153 589 aa16.08■□□□□ 0.16
LSP1P3-201ENST00000449530 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
LSP1P3-201ENST00000449530 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.16
LSP1P3-201ENST00000449530 STK32BQ9NY57 414 aa16.08■□□□□ 0.16
LSP1P3-201ENST00000449530 KDM6AO15550 1401 aaPredicted RBP16.08■□□□□ 0.16
LSP1P3-201ENST00000449530 SCN11AQ9UI33 1791 aa16.08■□□□□ 0.16
LSP1P3-201ENST00000449530 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.16
LSP1P3-201ENST00000449530 AMOTQ4VCS5 1084 aa16.07■□□□□ 0.16
LSP1P3-201ENST00000449530 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
LSP1P3-201ENST00000449530 LRRC4BQ9NT99 713 aa16.07■□□□□ 0.16
LSP1P3-201ENST00000449530 PALLDQ8WX93 1383 aa16.07■□□□□ 0.16
LSP1P3-201ENST00000449530 QSER1Q2KHR3 1735 aa16.07■□□□□ 0.16
LSP1P3-201ENST00000449530 U2SURPO15042 1029 aaKnown RBP16.06■□□□□ 0.16
LSP1P3-201ENST00000449530 KCNQ4P56696 695 aa16.06■□□□□ 0.16
LSP1P3-201ENST00000449530 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
LSP1P3-201ENST00000449530 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
LSP1P3-201ENST00000449530 C1orf141Q5JVX7 400 aa16.05■□□□□ 0.16
LSP1P3-201ENST00000449530 TMOD3Q9NYL9 352 aa16.05■□□□□ 0.16
LSP1P3-201ENST00000449530 CCNL1Q9UK58 526 aaPredicted RBP16.05■□□□□ 0.16
LSP1P3-201ENST00000449530 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
LSP1P3-201ENST00000449530 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
LSP1P3-201ENST00000449530 SLC15A2Q16348 729 aa16.04■□□□□ 0.16
LSP1P3-201ENST00000449530 ZNF827Q17R98 1081 aa16.04■□□□□ 0.16
LSP1P3-201ENST00000449530 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
LSP1P3-201ENST00000449530 PIGBQ92521 554 aa16.04■□□□□ 0.16
LSP1P3-201ENST00000449530 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.16
LSP1P3-201ENST00000449530 DCAF5Q96JK2 942 aa16.02■□□□□ 0.16
LSP1P3-201ENST00000449530 PDGFDQ9GZP0 370 aaPredicted RBP16.02■□□□□ 0.16
LSP1P3-201ENST00000449530 C4BP0C0L5 1744 aa16.02■□□□□ 0.15
LSP1P3-201ENST00000449530 ADAMTS7Q9UKP4 1686 aa16.02■□□□□ 0.15
LSP1P3-201ENST00000449530 UTRNP46939 3433 aa16.01■□□□□ 0.15
LSP1P3-201ENST00000449530 SMARCC1Q92922 1105 aaPredicted RBP16.01■□□□□ 0.15
LSP1P3-201ENST00000449530 MRC1P22897 1456 aa16■□□□□ 0.15
LSP1P3-201ENST00000449530 AKT1S1Q96B36 256 aa16■□□□□ 0.15
LSP1P3-201ENST00000449530 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
LSP1P3-201ENST00000449530 MTHFSDQ2M296 383 aaKnown RBP15.99■□□□□ 0.15
LSP1P3-201ENST00000449530 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
LSP1P3-201ENST00000449530 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
LSP1P3-201ENST00000449530 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
LSP1P3-201ENST00000449530 ZBTB7AO95365 584 aa15.98■□□□□ 0.15
LSP1P3-201ENST00000449530 CABP4P57796 275 aa15.98■□□□□ 0.15
LSP1P3-201ENST00000449530 ZNF831Q5JPB2 1677 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms