RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 DDX54Q8TDD1 881 aaKnown RBP9.59□□□□□ -0.87
PBRM1-216ENST00000449505 MEGF6O75095 1541 aa9.59□□□□□ -0.87
PBRM1-216ENST00000449505 INSRP06213 1382 aa9.59□□□□□ -0.87
PBRM1-216ENST00000449505 SHANK3Q9BYB0 1731 aa9.59□□□□□ -0.87
PBRM1-216ENST00000449505 PCDH11XQ9BZA7 1347 aa9.58□□□□□ -0.88
PBRM1-216ENST00000449505 PCDH11YQ9BZA8 1340 aa9.58□□□□□ -0.88
PBRM1-216ENST00000449505 ZCRB1Q8TBF4 217 aaKnown RBP9.58□□□□□ -0.88
PBRM1-216ENST00000449505 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
PBRM1-216ENST00000449505 SYTL4Q96C24 671 aaPredicted RBP9.58□□□□□ -0.88
PBRM1-216ENST00000449505 LY75O60449 1722 aa9.58□□□□□ -0.88
PBRM1-216ENST00000449505 MAP3K5Q99683 1374 aa9.58□□□□□ -0.88
PBRM1-216ENST00000449505 NSD3Q9BZ95 1437 aa9.57□□□□□ -0.88
PBRM1-216ENST00000449505 ANKRD26Q9UPS8 1709 aa9.57□□□□□ -0.88
PBRM1-216ENST00000449505 TATP17735 454 aaPredicted RBP9.57□□□□□ -0.88
PBRM1-216ENST00000449505 POLD1P28340 1107 aa9.57□□□□□ -0.88
PBRM1-216ENST00000449505 GGNBP2Q9H3C7 697 aa9.57□□□□□ -0.88
PBRM1-216ENST00000449505 RGPD2P0DJD1 1756 aa9.57□□□□□ -0.88
PBRM1-216ENST00000449505 PLEKHG2Q9H7P9 1386 aa9.56□□□□□ -0.88
PBRM1-216ENST00000449505 FYB1O15117 783 aa9.56□□□□□ -0.88
PBRM1-216ENST00000449505 RRS1Q15050 365 aaKnown RBP9.56□□□□□ -0.88
PBRM1-216ENST00000449505 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
PBRM1-216ENST00000449505 NSD2O96028 1365 aa9.55□□□□□ -0.88
PBRM1-216ENST00000449505 PTGER2P43116 358 aa9.55□□□□□ -0.88
PBRM1-216ENST00000449505 ARXQ96QS3 562 aa9.55□□□□□ -0.88
PBRM1-216ENST00000449505 TFCP2L1Q9NZI6 479 aa9.55□□□□□ -0.88
PBRM1-216ENST00000449505 PKD1L3Q7Z443 1732 aa9.55□□□□□ -0.88
PBRM1-216ENST00000449505 PRIM1P49642 420 aaKnown RBP9.54□□□□□ -0.88
PBRM1-216ENST00000449505 ZNF827Q17R98 1081 aa9.54□□□□□ -0.88
PBRM1-216ENST00000449505 FHDC1Q9C0D6 1143 aaPredicted RBP9.54□□□□□ -0.88
PBRM1-216ENST00000449505 PDGFDQ9GZP0 370 aaPredicted RBP9.54□□□□□ -0.88
PBRM1-216ENST00000449505 CCNL1Q9UK58 526 aaPredicted RBP9.54□□□□□ -0.88
PBRM1-216ENST00000449505 C5P01031 1676 aa9.54□□□□□ -0.88
PBRM1-216ENST00000449505 NBPF6Q5VWK0 638 aa9.53□□□□□ -0.88
PBRM1-216ENST00000449505 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
PBRM1-216ENST00000449505 NBPF4Q96M43 638 aa9.53□□□□□ -0.88
PBRM1-216ENST00000449505 SGIP1Q9BQI5 828 aa9.53□□□□□ -0.88
PBRM1-216ENST00000449505 SYT17Q9BSW7 474 aa9.53□□□□□ -0.88
PBRM1-216ENST00000449505 TUBGCP6Q96RT7 1819 aa9.53□□□□□ -0.88
PBRM1-216ENST00000449505 NCAPD2Q15021 1401 aa9.53□□□□□ -0.88
PBRM1-216ENST00000449505 COL24A1Q17RW2 1714 aa9.53□□□□□ -0.88
PBRM1-216ENST00000449505 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
PBRM1-216ENST00000449505 FLAD1Q8NFF5 587 aa9.52□□□□□ -0.89
PBRM1-216ENST00000449505 SMARCC1Q92922 1105 aaPredicted RBP9.52□□□□□ -0.89
PBRM1-216ENST00000449505 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.89
PBRM1-216ENST00000449505 SPG7Q9UQ90 795 aa9.52□□□□□ -0.89
PBRM1-216ENST00000449505 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
PBRM1-216ENST00000449505 PALLDQ8WX93 1383 aa9.51□□□□□ -0.89
PBRM1-216ENST00000449505 CHD4Q14839 1912 aa9.51□□□□□ -0.89
PBRM1-216ENST00000449505 USHBP1Q8N6Y0 703 aa9.51□□□□□ -0.89
PBRM1-216ENST00000449505 UTRNP46939 3433 aa9.5□□□□□ -0.89
PBRM1-216ENST00000449505 PPM1GO15355 546 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-216ENST00000449505 FBLN1P23142 703 aa9.5□□□□□ -0.89
PBRM1-216ENST00000449505 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
PBRM1-216ENST00000449505 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
PBRM1-216ENST00000449505 PCGF6Q9BYE7 350 aa9.5□□□□□ -0.89
PBRM1-216ENST00000449505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.5□□□□□ -0.899e-7■■■□□ 19
PBRM1-216ENST00000449505 TOGARAM1Q9Y4F4 1720 aa9.5□□□□□ -0.89
PBRM1-216ENST00000449505 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
PBRM1-216ENST00000449505 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
PBRM1-216ENST00000449505 EMILIN1Q9Y6C2 1016 aa9.49□□□□□ -0.89
PBRM1-216ENST00000449505 MAP2P11137 1827 aaKnown RBP9.49□□□□□ -0.89
PBRM1-216ENST00000449505 TAF1LQ8IZX4 1826 aa9.49□□□□□ -0.89
PBRM1-216ENST00000449505 C4BP0C0L5 1744 aa9.48□□□□□ -0.89
PBRM1-216ENST00000449505 ITGB4P16144 1822 aa9.48□□□□□ -0.89
PBRM1-216ENST00000449505 GPR162Q16538 588 aa9.48□□□□□ -0.89
PBRM1-216ENST00000449505 MPRIPQ6WCQ1 1025 aa9.48□□□□□ -0.89
PBRM1-216ENST00000449505 AK7Q96M32 723 aa9.48□□□□□ -0.89
PBRM1-216ENST00000449505 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
PBRM1-216ENST00000449505 CYP27B1O15528 508 aa9.47□□□□□ -0.89
PBRM1-216ENST00000449505 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
PBRM1-216ENST00000449505 TMOD3Q9NYL9 352 aa9.47□□□□□ -0.89
PBRM1-216ENST00000449505 HSP90AB1P08238 724 aaKnown RBP9.46□□□□□ -0.9
PBRM1-216ENST00000449505 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.9
PBRM1-216ENST00000449505 IFNL2Q8IZJ0 200 aa9.46□□□□□ -0.9
PBRM1-216ENST00000449505 CCER1Q8TC90 406 aaPredicted RBP9.46□□□□□ -0.9
PBRM1-216ENST00000449505 GRIN3BO60391 1043 aa9.45□□□□□ -0.9
PBRM1-216ENST00000449505 SSFA2P28290 1259 aa9.45□□□□□ -0.9
PBRM1-216ENST00000449505 KCNQ4P56696 695 aa9.45□□□□□ -0.9
PBRM1-216ENST00000449505 PELP1Q8IZL8 1130 aaKnown RBP9.45□□□□□ -0.9
PBRM1-216ENST00000449505 POLKQ9UBT6 870 aa9.45□□□□□ -0.9
PBRM1-216ENST00000449505 GOLGB1Q14789 3259 aaKnown RBP9.45□□□□□ -0.9
PBRM1-216ENST00000449505 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
PBRM1-216ENST00000449505 UBR3Q6ZT12 1888 aa9.45□□□□□ -0.9
PBRM1-216ENST00000449505 PHKG2P15735 406 aa9.44□□□□□ -0.9
PBRM1-216ENST00000449505 COL23A1Q86Y22 540 aaPredicted RBP9.44□□□□□ -0.9
PBRM1-216ENST00000449505 ZNF784Q8NCA9 323 aaPredicted RBP9.44□□□□□ -0.9
PBRM1-216ENST00000449505 EYA1Q99502 592 aa9.44□□□□□ -0.9
PBRM1-216ENST00000449505 RNF39Q9H2S5 420 aa9.44□□□□□ -0.9
PBRM1-216ENST00000449505 IGSF1Q8N6C5 1336 aa9.44□□□□□ -0.9
PBRM1-216ENST00000449505 LOC102724428A0A0B4J2F2 783 aa9.43□□□□□ -0.9
PBRM1-216ENST00000449505 HSPA5P11021 654 aaKnown RBP9.43□□□□□ -0.9
PBRM1-216ENST00000449505 TNNT2P45379 298 aaPredicted RBP9.43□□□□□ -0.9
PBRM1-216ENST00000449505 SIK1P57059 783 aa9.43□□□□□ -0.9
PBRM1-216ENST00000449505 EIF4A2Q14240 407 aaKnown RBP9.43□□□□□ -0.9
PBRM1-216ENST00000449505 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
PBRM1-216ENST00000449505 PIGBQ92521 554 aa9.43□□□□□ -0.9
PBRM1-216ENST00000449505 CD2APQ9Y5K6 639 aa9.43□□□□□ -0.9
PBRM1-216ENST00000449505 PLEKHO1Q53GL0 409 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-216ENST00000449505 C1orf141Q5JVX7 400 aa9.42□□□□□ -0.9
PBRM1-216ENST00000449505 MSL1Q68DK7 614 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms