RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
HLA-DRB9-201ENST00000449413 ERBB3P21860 1342 aa16.79■□□□□ 0.28
HLA-DRB9-201ENST00000449413 LRRC37A3O60309 1634 aa16.79■□□□□ 0.28
HLA-DRB9-201ENST00000449413 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
HLA-DRB9-201ENST00000449413 VIRMAQ69YN4 1812 aaKnown RBP16.79■□□□□ 0.28
HLA-DRB9-201ENST00000449413 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
HLA-DRB9-201ENST00000449413 SPATA31A5Q5VU36 1347 aa16.78■□□□□ 0.28
HLA-DRB9-201ENST00000449413 SPATA31A7Q8IWB4 1347 aa16.78■□□□□ 0.28
HLA-DRB9-201ENST00000449413 APAF1O14727 1248 aa16.78■□□□□ 0.28
HLA-DRB9-201ENST00000449413 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
HLA-DRB9-201ENST00000449413 LTV1Q96GA3 475 aaPredicted RBP16.78■□□□□ 0.28
HLA-DRB9-201ENST00000449413 PRDM11Q9NQV5 511 aa16.78■□□□□ 0.28
HLA-DRB9-201ENST00000449413 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
HLA-DRB9-201ENST00000449413 ANKRD24Q8TF21 1146 aa16.77■□□□□ 0.28
HLA-DRB9-201ENST00000449413 EYA1Q99502 592 aa16.77■□□□□ 0.28
HLA-DRB9-201ENST00000449413 TNS1Q9HBL0 1735 aaKnown RBP16.76■□□□□ 0.27
HLA-DRB9-201ENST00000449413 CHRNA2Q15822 529 aa16.76■□□□□ 0.27
HLA-DRB9-201ENST00000449413 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
HLA-DRB9-201ENST00000449413 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
HLA-DRB9-201ENST00000449413 TCP11L2Q8N4U5 519 aa16.76■□□□□ 0.27
HLA-DRB9-201ENST00000449413 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
HLA-DRB9-201ENST00000449413 AXIN2Q9Y2T1 843 aa16.76■□□□□ 0.27
HLA-DRB9-201ENST00000449413 ZNF521Q96K83 1311 aa16.75■□□□□ 0.27
HLA-DRB9-201ENST00000449413 NEFMP07197 916 aa16.75■□□□□ 0.27
HLA-DRB9-201ENST00000449413 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
HLA-DRB9-201ENST00000449413 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
HLA-DRB9-201ENST00000449413 TRIM37O94972 964 aa16.74■□□□□ 0.27
HLA-DRB9-201ENST00000449413 APBA3O96018 575 aa16.73■□□□□ 0.27
HLA-DRB9-201ENST00000449413 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
HLA-DRB9-201ENST00000449413 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
HLA-DRB9-201ENST00000449413 SHANK3Q9BYB0 1731 aa16.73■□□□□ 0.27
HLA-DRB9-201ENST00000449413 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
HLA-DRB9-201ENST00000449413 NBPF14Q5TI25 921 aa16.72■□□□□ 0.27
HLA-DRB9-201ENST00000449413 NBPF6Q5VWK0 638 aa16.72■□□□□ 0.27
HLA-DRB9-201ENST00000449413 USHBP1Q8N6Y0 703 aa16.72■□□□□ 0.27
HLA-DRB9-201ENST00000449413 NBPF4Q96M43 638 aa16.72■□□□□ 0.27
HLA-DRB9-201ENST00000449413 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
HLA-DRB9-201ENST00000449413 PPP1R1BQ9UD71 204 aaPredicted RBP16.72■□□□□ 0.27
HLA-DRB9-201ENST00000449413 PLEKHG2Q9H7P9 1386 aa16.72■□□□□ 0.27
HLA-DRB9-201ENST00000449413 NFE2L2Q16236 605 aa16.71■□□□□ 0.27
HLA-DRB9-201ENST00000449413 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
HLA-DRB9-201ENST00000449413 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
HLA-DRB9-201ENST00000449413 MEGF6O75095 1541 aa16.7■□□□□ 0.26
HLA-DRB9-201ENST00000449413 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
HLA-DRB9-201ENST00000449413 PHACTR3Q96KR7 559 aa16.7■□□□□ 0.26
HLA-DRB9-201ENST00000449413 UTRNP46939 3433 aa16.7■□□□□ 0.26
HLA-DRB9-201ENST00000449413 ADAMTS7Q9UKP4 1686 aa16.69■□□□□ 0.26
HLA-DRB9-201ENST00000449413 KCNQ2O43526 872 aa16.69■□□□□ 0.26
HLA-DRB9-201ENST00000449413 NEUROD2Q15784 382 aa16.69■□□□□ 0.26
HLA-DRB9-201ENST00000449413 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
HLA-DRB9-201ENST00000449413 CSB-PGBD3P0DP91 1061 aa16.68■□□□□ 0.26
HLA-DRB9-201ENST00000449413 WWC1Q8IX03 1113 aa16.68■□□□□ 0.26
HLA-DRB9-201ENST00000449413 CRB1P82279 1406 aa16.68■□□□□ 0.26
HLA-DRB9-201ENST00000449413 RREB1Q92766 1687 aa16.66■□□□□ 0.26
HLA-DRB9-201ENST00000449413 OVOS2A0A0G2JMS6 1433 aa16.66■□□□□ 0.26
HLA-DRB9-201ENST00000449413 RIPK4P57078 832 aa16.66■□□□□ 0.26
HLA-DRB9-201ENST00000449413 GOLGA2Q08379 1002 aa16.66■□□□□ 0.26
HLA-DRB9-201ENST00000449413 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
HLA-DRB9-201ENST00000449413 NLRP2Q9NX02 1062 aa16.66■□□□□ 0.26
HLA-DRB9-201ENST00000449413 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
HLA-DRB9-201ENST00000449413 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
HLA-DRB9-201ENST00000449413 ZNF784Q8NCA9 323 aaPredicted RBP16.65■□□□□ 0.26
HLA-DRB9-201ENST00000449413 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
HLA-DRB9-201ENST00000449413 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
HLA-DRB9-201ENST00000449413 MAP3K5Q99683 1374 aa16.64■□□□□ 0.26
HLA-DRB9-201ENST00000449413 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
HLA-DRB9-201ENST00000449413 NUP188Q5SRE5 1749 aa16.63■□□□□ 0.25
HLA-DRB9-201ENST00000449413 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
HLA-DRB9-201ENST00000449413 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
HLA-DRB9-201ENST00000449413 WDR63Q8IWG1 891 aa16.63■□□□□ 0.25
HLA-DRB9-201ENST00000449413 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
HLA-DRB9-201ENST00000449413 E9PSI1 815 aa16.62■□□□□ 0.25
HLA-DRB9-201ENST00000449413 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
HLA-DRB9-201ENST00000449413 TOM1L2Q6ZVM7 507 aa16.62■□□□□ 0.25
HLA-DRB9-201ENST00000449413 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
HLA-DRB9-201ENST00000449413 SLFN5Q08AF3 891 aa16.61■□□□□ 0.25
HLA-DRB9-201ENST00000449413 IL16Q14005 1332 aa16.61■□□□□ 0.25
HLA-DRB9-201ENST00000449413 LARP1Q6PKG0 1096 aaKnown RBP16.6■□□□□ 0.25
HLA-DRB9-201ENST00000449413 RAPGEF4Q8WZA2 1011 aa16.6■□□□□ 0.25
HLA-DRB9-201ENST00000449413 CARD10Q9BWT7 1032 aa16.6■□□□□ 0.25
HLA-DRB9-201ENST00000449413 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
HLA-DRB9-201ENST00000449413 TATP17735 454 aaPredicted RBP16.59■□□□□ 0.25
HLA-DRB9-201ENST00000449413 EVA1CP58658 441 aa16.59■□□□□ 0.25
HLA-DRB9-201ENST00000449413 CALD1Q05682 793 aaKnown RBP16.59■□□□□ 0.25
HLA-DRB9-201ENST00000449413 AMOTQ4VCS5 1084 aa16.59■□□□□ 0.25
HLA-DRB9-201ENST00000449413 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
HLA-DRB9-201ENST00000449413 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
HLA-DRB9-201ENST00000449413 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
HLA-DRB9-201ENST00000449413 TRMT2AQ8IZ69 625 aaKnown RBP16.58■□□□□ 0.24
HLA-DRB9-201ENST00000449413 MRC1P22897 1456 aa16.58■□□□□ 0.24
HLA-DRB9-201ENST00000449413 CEP350Q5VT06 3117 aa16.58■□□□□ 0.24
HLA-DRB9-201ENST00000449413 FANCIQ9NVI1 1328 aa16.57■□□□□ 0.24
HLA-DRB9-201ENST00000449413 C1QTNF8P60827 252 aa16.57■□□□□ 0.24
HLA-DRB9-201ENST00000449413 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
HLA-DRB9-201ENST00000449413 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
HLA-DRB9-201ENST00000449413 MYH16Q9H6N6 1097 aa16.57■□□□□ 0.24
HLA-DRB9-201ENST00000449413 TNS2Q63HR2 1409 aa16.56■□□□□ 0.24
HLA-DRB9-201ENST00000449413 GNAT3A8MTJ3 354 aa16.56■□□□□ 0.24
HLA-DRB9-201ENST00000449413 HTATSF1O43719 755 aaKnown RBP16.56■□□□□ 0.24
HLA-DRB9-201ENST00000449413 USP35Q9P2H5 1018 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms