RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, human

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM2-208	ENST00000448732	MYOM1	P52179	1685 aa		32.32	■■■□□ 2.76
R3HDM2-208	ENST00000448732	PRIM1	P49642	420 aa	Known RBP	32.32	■■■□□ 2.76
R3HDM2-208	ENST00000448732	HSP90AB2P	Q58FF8	381 aa		32.32	■■■□□ 2.76
R3HDM2-208	ENST00000448732	SLC27A3	Q5K4L6	730 aa		32.31	■■■□□ 2.76
R3HDM2-208	ENST00000448732	MTFR1L	Q9H019	292 aa		32.31	■■■□□ 2.76
R3HDM2-208	ENST00000448732	SMG6	Q86US8	1419 aa	Known RBP	32.31	■■■□□ 2.76
R3HDM2-208	ENST00000448732	SHANK3	Q9BYB0	1731 aa		32.3	■■■□□ 2.76
R3HDM2-208	ENST00000448732	FLT4	P35916	1363 aa		32.3	■■■□□ 2.76
R3HDM2-208	ENST00000448732	NSD3	Q9BZ95	1437 aa		32.29	■■■□□ 2.76
R3HDM2-208	ENST00000448732	USHBP1	Q8N6Y0	703 aa		32.29	■■■□□ 2.76
R3HDM2-208	ENST00000448732	RAPGEF4	Q8WZA2	1011 aa		32.28	■■■□□ 2.76
R3HDM2-208	ENST00000448732	SYTL4	Q96C24	671 aa	Predicted RBP	32.28	■■■□□ 2.76
R3HDM2-208	ENST00000448732	ZNF827	Q17R98	1081 aa		32.27	■■■□□ 2.76
R3HDM2-208	ENST00000448732	SGIP1	Q9BQI5	828 aa		32.27	■■■□□ 2.76
R3HDM2-208	ENST00000448732	DCAF8L1	A6NGE4	600 aa		32.26	■■■□□ 2.75
R3HDM2-208	ENST00000448732	AKT1S1	Q96B36	256 aa		32.26	■■■□□ 2.75
R3HDM2-208	ENST00000448732	NSD2	O96028	1365 aa		32.25	■■■□□ 2.75
R3HDM2-208	ENST00000448732	TAT	P17735	454 aa	Predicted RBP	32.25	■■■□□ 2.75
R3HDM2-208	ENST00000448732	DOT1L	Q8TEK3	1739 aa		32.25	■■■□□ 2.75
R3HDM2-208	ENST00000448732	EMILIN1	Q9Y6C2	1016 aa		32.22	■■■□□ 2.75
R3HDM2-208	ENST00000448732	LY75	O60449	1722 aa		32.18	■■■□□ 2.74
R3HDM2-208	ENST00000448732	KCNQ4	P56696	695 aa		32.18	■■■□□ 2.74
R3HDM2-208	ENST00000448732	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.18	■■■□□ 2.74
R3HDM2-208	ENST00000448732	YY1	P25490	414 aa		32.17	■■■□□ 2.74
R3HDM2-208	ENST00000448732	SLC16A10	Q8TF71	515 aa		32.17	■■■□□ 2.74
R3HDM2-208	ENST00000448732	SYT17	Q9BSW7	474 aa		32.17	■■■□□ 2.74
R3HDM2-208	ENST00000448732	PCDH11X	Q9BZA7	1347 aa		32.17	■■■□□ 2.74
R3HDM2-208	ENST00000448732	PCDH11Y	Q9BZA8	1340 aa		32.17	■■■□□ 2.74
R3HDM2-208	ENST00000448732	WASHC2A	Q641Q2	1341 aa		32.16	■■■□□ 2.74
R3HDM2-208	ENST00000448732	QSER1	Q2KHR3	1735 aa		32.15	■■■□□ 2.74
R3HDM2-208	ENST00000448732	ARX	Q96QS3	562 aa		32.15	■■■□□ 2.74
R3HDM2-208	ENST00000448732	PPM1G	O15355	546 aa	Predicted RBP	32.14	■■■□□ 2.74
R3HDM2-208	ENST00000448732	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.14	■■■□□ 2.74	3e-8	■■■■□ 20.2
R3HDM2-208	ENST00000448732	PNPLA7	Q6ZV29	1317 aa		32.13	■■■□□ 2.73
R3HDM2-208	ENST00000448732	TFCP2L1	Q9NZI6	479 aa		32.13	■■■□□ 2.73
R3HDM2-208	ENST00000448732	CCNL1	Q9UK58	526 aa	Predicted RBP	32.13	■■■□□ 2.73
R3HDM2-208	ENST00000448732	MAP2	P11137	1827 aa	Known RBP	32.12	■■■□□ 2.73
R3HDM2-208	ENST00000448732	ANKRD26	Q9UPS8	1709 aa		32.12	■■■□□ 2.73
R3HDM2-208	ENST00000448732	NCAPD2	Q15021	1401 aa		32.12	■■■□□ 2.73
R3HDM2-208	ENST00000448732	CYP27B1	O15528	508 aa		32.12	■■■□□ 2.73
R3HDM2-208	ENST00000448732	POLR3GL	Q9BT43	218 aa		32.12	■■■□□ 2.73
R3HDM2-208	ENST00000448732	POLK	Q9UBT6	870 aa		32.11	■■■□□ 2.73
R3HDM2-208	ENST00000448732	HSPA5	P11021	654 aa	Known RBP	32.1	■■■□□ 2.73
R3HDM2-208	ENST00000448732	EYA1	Q99502	592 aa		32.08	■■■□□ 2.73
R3HDM2-208	ENST00000448732	MAP3K5	Q99683	1374 aa		32.07	■■■□□ 2.73
R3HDM2-208	ENST00000448732	CCER1	Q8TC90	406 aa	Predicted RBP	32.07	■■■□□ 2.72
R3HDM2-208	ENST00000448732	TUBGCP6	Q96RT7	1819 aa		32.06	■■■□□ 2.72
R3HDM2-208	ENST00000448732	NKX1-1	Q15270	411 aa	Predicted RBP	32.05	■■■□□ 2.72
R3HDM2-208	ENST00000448732	COL24A1	Q17RW2	1714 aa		32.05	■■■□□ 2.72
R3HDM2-208	ENST00000448732	PKD1L3	Q7Z443	1732 aa		32.05	■■■□□ 2.72
R3HDM2-208	ENST00000448732	MPRIP	Q6WCQ1	1025 aa		32.04	■■■□□ 2.72
R3HDM2-208	ENST00000448732	SPG7	Q9UQ90	795 aa		32.04	■■■□□ 2.72
R3HDM2-208	ENST00000448732	HMGB2	P26583	209 aa	Known RBP	32.03	■■■□□ 2.72
R3HDM2-208	ENST00000448732	PANK3	Q9H999	370 aa		32.03	■■■□□ 2.72
R3HDM2-208	ENST00000448732	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.03	■■■□□ 2.72
R3HDM2-208	ENST00000448732	POLD1	P28340	1107 aa		32.02	■■■□□ 2.72
R3HDM2-208	ENST00000448732	PALLD	Q8WX93	1383 aa		32	■■■□□ 2.71
R3HDM2-208	ENST00000448732	TNNT2	P45379	298 aa	Predicted RBP	32	■■■□□ 2.71
R3HDM2-208	ENST00000448732	ITGB4	P16144	1822 aa		31.99	■■■□□ 2.71
R3HDM2-208	ENST00000448732	COL23A1	Q86Y22	540 aa	Predicted RBP	31.99	■■■□□ 2.71
R3HDM2-208	ENST00000448732	SMARCC1	Q92922	1105 aa	Predicted RBP	31.99	■■■□□ 2.71
R3HDM2-208	ENST00000448732	TOGARAM1	Q9Y4F4	1720 aa		31.98	■■■□□ 2.71
R3HDM2-208	ENST00000448732	EIF4A2	Q14240	407 aa	Known RBP	31.98	■■■□□ 2.71
R3HDM2-208	ENST00000448732	PIGB	Q92521	554 aa		31.97	■■■□□ 2.71
R3HDM2-208	ENST00000448732	C5	P01031	1676 aa		31.95	■■■□□ 2.7
R3HDM2-208	ENST00000448732	MSH5	O43196	834 aa		31.94	■■■□□ 2.7
R3HDM2-208	ENST00000448732	IFNL2	Q8IZJ0	200 aa		31.93	■■■□□ 2.7
R3HDM2-208	ENST00000448732	TAF1L	Q8IZX4	1826 aa		31.93	■■■□□ 2.7
R3HDM2-208	ENST00000448732	FLAD1	Q8NFF5	587 aa		31.92	■■■□□ 2.7
R3HDM2-208	ENST00000448732	PHKG2	P15735	406 aa		31.91	■■■□□ 2.7
R3HDM2-208	ENST00000448732	PLEKHG2	Q9H7P9	1386 aa		31.91	■■■□□ 2.7
R3HDM2-208	ENST00000448732	KLHL34	Q8N239	644 aa		31.89	■■■□□ 2.7
R3HDM2-208	ENST00000448732	IGSF1	Q8N6C5	1336 aa		31.89	■■■□□ 2.7
R3HDM2-208	ENST00000448732	TMOD3	Q9NYL9	352 aa		31.87	■■■□□ 2.69
R3HDM2-208	ENST00000448732	GPR162	Q16538	588 aa		31.86	■■■□□ 2.69
R3HDM2-208	ENST00000448732	MORC1	Q86VD1	984 aa		31.86	■■■□□ 2.69
R3HDM2-208	ENST00000448732	LOC102724428	A0A0B4J2F2	783 aa		31.85	■■■□□ 2.69
R3HDM2-208	ENST00000448732	SIK1	P57059	783 aa		31.85	■■■□□ 2.69
R3HDM2-208	ENST00000448732	C4B	P0C0L5	1744 aa		31.85	■■■□□ 2.69
R3HDM2-208	ENST00000448732	CHD4	Q14839	1912 aa		31.85	■■■□□ 2.69
R3HDM2-208	ENST00000448732	AK7	Q96M32	723 aa		31.84	■■■□□ 2.69
R3HDM2-208	ENST00000448732	ASAP1	Q9ULH1	1129 aa		31.84	■■■□□ 2.69
R3HDM2-208	ENST00000448732	UTRN	P46939	3433 aa		31.83	■■■□□ 2.69
R3HDM2-208	ENST00000448732	MSL1	Q68DK7	614 aa		31.83	■■■□□ 2.69
R3HDM2-208	ENST00000448732	NLGN2	Q8NFZ4	835 aa		31.83	■■■□□ 2.69
R3HDM2-208	ENST00000448732	KNSTRN	Q9Y448	316 aa		31.83	■■■□□ 2.69
R3HDM2-208	ENST00000448732	PLEKHO1	Q53GL0	409 aa	Predicted RBP	31.8	■■■□□ 2.68
R3HDM2-208	ENST00000448732	AMIGO3	Q86WK7	504 aa		31.8	■■■□□ 2.68
R3HDM2-208	ENST00000448732	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.8	■■■□□ 2.68
R3HDM2-208	ENST00000448732	ATG3	Q9NT62	314 aa		31.8	■■■□□ 2.68
R3HDM2-208	ENST00000448732	LINC00116	Q8NCU8	138 aa		31.79	■■■□□ 2.68
R3HDM2-208	ENST00000448732	ERVV-2	B6SEH9	535 aa		31.78	■■■□□ 2.68
R3HDM2-208	ENST00000448732	HSP90AB1	P08238	724 aa	Known RBP	31.78	■■■□□ 2.68
R3HDM2-208	ENST00000448732	AMOT	Q4VCS5	1084 aa		31.77	■■■□□ 2.68
R3HDM2-208	ENST00000448732	DCAF5	Q96JK2	942 aa		31.77	■■■□□ 2.68
R3HDM2-208	ENST00000448732	UBR3	Q6ZT12	1888 aa		31.77	■■■□□ 2.68
R3HDM2-208	ENST00000448732	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	31.76	■■■□□ 2.67
R3HDM2-208	ENST00000448732	ATP6V1A	P38606	617 aa		31.76	■■■□□ 2.67
R3HDM2-208	ENST00000448732	ITPK1	Q13572	414 aa		31.76	■■■□□ 2.67
R3HDM2-208	ENST00000448732	SSFA2	P28290	1259 aa		31.75	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms