RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 MEGF6O75095 1541 aa18.86■□□□□ 0.61
GTF3C3-206ENST00000448539 PARD3Q8TEW0 1356 aa18.86■□□□□ 0.61
GTF3C3-206ENST00000448539 IGSF1Q8N6C5 1336 aa18.86■□□□□ 0.61
GTF3C3-206ENST00000448539 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
GTF3C3-206ENST00000448539 NCAPD2Q15021 1401 aa18.84■□□□□ 0.61
GTF3C3-206ENST00000448539 TRIM37O94972 964 aa18.84■□□□□ 0.61
GTF3C3-206ENST00000448539 EN1Q05925 392 aaPredicted RBP18.83■□□□□ 0.6
GTF3C3-206ENST00000448539 SULT6B1Q6IMI4 303 aa18.83■□□□□ 0.6
GTF3C3-206ENST00000448539 SPG7Q9UQ90 795 aa18.83■□□□□ 0.6
GTF3C3-206ENST00000448539 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
GTF3C3-206ENST00000448539 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
GTF3C3-206ENST00000448539 PCDH11XQ9BZA7 1347 aa18.81■□□□□ 0.6
GTF3C3-206ENST00000448539 PCDH11YQ9BZA8 1340 aa18.81■□□□□ 0.6
GTF3C3-206ENST00000448539 BCL9O00512 1426 aa18.8■□□□□ 0.6
GTF3C3-206ENST00000448539 PLEKHO1Q53GL0 409 aaPredicted RBP18.79■□□□□ 0.6
GTF3C3-206ENST00000448539 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
GTF3C3-206ENST00000448539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.79■□□□□ 0.62e-11■■■■□ 20.7
GTF3C3-206ENST00000448539 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
GTF3C3-206ENST00000448539 APBA3O96018 575 aa18.78■□□□□ 0.6
GTF3C3-206ENST00000448539 HMOX1P09601 288 aa18.78■□□□□ 0.6
GTF3C3-206ENST00000448539 AMOTQ4VCS5 1084 aa18.78■□□□□ 0.6
GTF3C3-206ENST00000448539 PLEKHG2Q9H7P9 1386 aa18.78■□□□□ 0.6
GTF3C3-206ENST00000448539 COL3A1P02461 1466 aaPredicted RBP18.77■□□□□ 0.6
GTF3C3-206ENST00000448539 PSDA5PKW4 1024 aaPredicted RBP18.77■□□□□ 0.6
GTF3C3-206ENST00000448539 ACSBG1Q96GR2 724 aa18.77■□□□□ 0.6
GTF3C3-206ENST00000448539 BCL11BQ9C0K0 894 aaPredicted RBP18.77■□□□□ 0.6
GTF3C3-206ENST00000448539 EZH2Q15910 746 aaKnown RBP18.76■□□□□ 0.59
GTF3C3-206ENST00000448539 PRKRIP1Q9H875 184 aaPredicted RBP18.76■□□□□ 0.59
GTF3C3-206ENST00000448539 KDRP35968 1356 aa18.76■□□□□ 0.59
GTF3C3-206ENST00000448539 U2AF1L5P0DN76 240 aaPredicted RBP18.75■□□□□ 0.59
GTF3C3-206ENST00000448539 U2AF1Q01081 240 aaKnown RBP eCLIP18.75■□□□□ 0.59
GTF3C3-206ENST00000448539 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
GTF3C3-206ENST00000448539 CYP27B1O15528 508 aa18.74■□□□□ 0.59
GTF3C3-206ENST00000448539 SYTL4Q96C24 671 aaPredicted RBP18.74■□□□□ 0.59
GTF3C3-206ENST00000448539 CAMKK2Q96RR4 588 aa18.74■□□□□ 0.59
GTF3C3-206ENST00000448539 KCNQ2O43526 872 aa18.73■□□□□ 0.59
GTF3C3-206ENST00000448539 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
GTF3C3-206ENST00000448539 ZNF530Q6P9A1 599 aaPredicted RBP18.73■□□□□ 0.59
GTF3C3-206ENST00000448539 LRP5O75197 1615 aa18.72■□□□□ 0.59
GTF3C3-206ENST00000448539 ANP32CO43423 234 aa18.72■□□□□ 0.59
GTF3C3-206ENST00000448539 PHKG2P15735 406 aa18.72■□□□□ 0.59
GTF3C3-206ENST00000448539 PKD1L3Q7Z443 1732 aa18.71■□□□□ 0.59
GTF3C3-206ENST00000448539 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.59
GTF3C3-206ENST00000448539 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
GTF3C3-206ENST00000448539 R3HDM1Q15032 1099 aaKnown RBP18.71■□□□□ 0.59
GTF3C3-206ENST00000448539 SHANK3Q9BYB0 1731 aa18.71■□□□□ 0.59
GTF3C3-206ENST00000448539 RREB1Q92766 1687 aa18.7■□□□□ 0.58
GTF3C3-206ENST00000448539 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
GTF3C3-206ENST00000448539 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
GTF3C3-206ENST00000448539 SBF2Q86WG5 1849 aa18.68■□□□□ 0.58
GTF3C3-206ENST00000448539 PLSCR1O15162 318 aa18.68■□□□□ 0.58
GTF3C3-206ENST00000448539 FCHSD2O94868 740 aa18.68■□□□□ 0.58
GTF3C3-206ENST00000448539 NEFMP07197 916 aa18.68■□□□□ 0.58
GTF3C3-206ENST00000448539 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
GTF3C3-206ENST00000448539 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
GTF3C3-206ENST00000448539 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
GTF3C3-206ENST00000448539 NUP188Q5SRE5 1749 aa18.67■□□□□ 0.58
GTF3C3-206ENST00000448539 RSPH6AQ9H0K4 717 aa18.67■□□□□ 0.58
GTF3C3-206ENST00000448539 MTHFSDQ2M296 383 aaKnown RBP18.66■□□□□ 0.58
GTF3C3-206ENST00000448539 AKAP4Q5JQC9 854 aa18.66■□□□□ 0.58
GTF3C3-206ENST00000448539 GAS2L2Q8NHY3 880 aa18.66■□□□□ 0.58
GTF3C3-206ENST00000448539 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
GTF3C3-206ENST00000448539 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
GTF3C3-206ENST00000448539 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
GTF3C3-206ENST00000448539 MPRIPQ6WCQ1 1025 aa18.65■□□□□ 0.58
GTF3C3-206ENST00000448539 DOT1LQ8TEK3 1739 aa18.64■□□□□ 0.57
GTF3C3-206ENST00000448539 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
GTF3C3-206ENST00000448539 ERVV-2B6SEH9 535 aa18.62■□□□□ 0.57
GTF3C3-206ENST00000448539 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
GTF3C3-206ENST00000448539 CABP4P57796 275 aa18.61■□□□□ 0.57
GTF3C3-206ENST00000448539 TXNRD1Q16881 649 aa18.61■□□□□ 0.57
GTF3C3-206ENST00000448539 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
GTF3C3-206ENST00000448539 NBPF14Q5TI25 921 aa18.6■□□□□ 0.57
GTF3C3-206ENST00000448539 PIGBQ92521 554 aa18.6■□□□□ 0.57
GTF3C3-206ENST00000448539 RGPD3A6NKT7 1758 aaPredicted RBP18.6■□□□□ 0.57
GTF3C3-206ENST00000448539 RGPD4Q7Z3J3 1758 aa18.6■□□□□ 0.57
GTF3C3-206ENST00000448539 BTAF1O14981 1849 aa18.59■□□□□ 0.57
GTF3C3-206ENST00000448539 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
GTF3C3-206ENST00000448539 ADRA2BP18089 450 aa18.59■□□□□ 0.57
GTF3C3-206ENST00000448539 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
GTF3C3-206ENST00000448539 KDM6AO15550 1401 aaPredicted RBP18.58■□□□□ 0.57
GTF3C3-206ENST00000448539 MAP3K5Q99683 1374 aa18.58■□□□□ 0.57
GTF3C3-206ENST00000448539 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.56
GTF3C3-206ENST00000448539 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
GTF3C3-206ENST00000448539 RTF1Q92541 710 aaKnown RBP18.57■□□□□ 0.56
GTF3C3-206ENST00000448539 TOGARAM1Q9Y4F4 1720 aa18.57■□□□□ 0.56
GTF3C3-206ENST00000448539 PROM2Q8N271 834 aa18.56■□□□□ 0.56
GTF3C3-206ENST00000448539 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
GTF3C3-206ENST00000448539 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
GTF3C3-206ENST00000448539 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
GTF3C3-206ENST00000448539 HMGB2P26583 209 aaKnown RBP18.55■□□□□ 0.56
GTF3C3-206ENST00000448539 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
GTF3C3-206ENST00000448539 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
GTF3C3-206ENST00000448539 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
GTF3C3-206ENST00000448539 CCNL1Q9UK58 526 aaPredicted RBP18.55■□□□□ 0.56
GTF3C3-206ENST00000448539 ASAP1Q9ULH1 1129 aa18.54■□□□□ 0.56
GTF3C3-206ENST00000448539 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
GTF3C3-206ENST00000448539 ITGB4P16144 1822 aa18.53■□□□□ 0.56
GTF3C3-206ENST00000448539 TEFQ10587 303 aa18.53■□□□□ 0.56
GTF3C3-206ENST00000448539 HTATSF1O43719 755 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms