RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.08
LINC00408-201ENST00000447784 EZH2Q15910 746 aaKnown RBP15.52■□□□□ 0.08
LINC00408-201ENST00000447784 NBPF6Q5VWK0 638 aa15.52■□□□□ 0.08
LINC00408-201ENST00000447784 NBPF4Q96M43 638 aa15.52■□□□□ 0.08
LINC00408-201ENST00000447784 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
LINC00408-201ENST00000447784 PLSCR1O15162 318 aa15.51■□□□□ 0.07
LINC00408-201ENST00000447784 WNK3Q9BYP7 1800 aa15.51■□□□□ 0.07
LINC00408-201ENST00000447784 TNS1Q9HBL0 1735 aaKnown RBP15.51■□□□□ 0.07
LINC00408-201ENST00000447784 FAM208AQ9UK61 1670 aaKnown RBP15.51■□□□□ 0.07
LINC00408-201ENST00000447784 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
LINC00408-201ENST00000447784 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
LINC00408-201ENST00000447784 ZCRB1Q8TBF4 217 aaKnown RBP15.48■□□□□ 0.07
LINC00408-201ENST00000447784 RAPGEF4Q8WZA2 1011 aa15.48■□□□□ 0.07
LINC00408-201ENST00000447784 IL13P35225 146 aa15.47■□□□□ 0.07
LINC00408-201ENST00000447784 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
LINC00408-201ENST00000447784 WDR43Q15061 677 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00408-201ENST00000447784 PTF1AQ7RTS3 328 aa15.46■□□□□ 0.07
LINC00408-201ENST00000447784 DDX54Q8TDD1 881 aaKnown RBP15.46■□□□□ 0.07
LINC00408-201ENST00000447784 MEGF6O75095 1541 aa15.46■□□□□ 0.07
LINC00408-201ENST00000447784 NCAPD2Q15021 1401 aa15.45■□□□□ 0.06
LINC00408-201ENST00000447784 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
LINC00408-201ENST00000447784 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
LINC00408-201ENST00000447784 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00408-201ENST00000447784 USHBP1Q8N6Y0 703 aa15.45■□□□□ 0.06
LINC00408-201ENST00000447784 EYA1Q99502 592 aa15.45■□□□□ 0.06
LINC00408-201ENST00000447784 ANKRD26Q9UPS8 1709 aa15.44■□□□□ 0.06
LINC00408-201ENST00000447784 KCNQ2O43526 872 aa15.44■□□□□ 0.06
LINC00408-201ENST00000447784 NBPF14Q5TI25 921 aa15.44■□□□□ 0.06
LINC00408-201ENST00000447784 MIER1Q8N108 512 aa15.44■□□□□ 0.06
LINC00408-201ENST00000447784 SULT6B1Q6IMI4 303 aa15.43■□□□□ 0.06
LINC00408-201ENST00000447784 ACSBG1Q96GR2 724 aa15.43■□□□□ 0.06
LINC00408-201ENST00000447784 CCER2I3L3R5 266 aa15.42■□□□□ 0.06
LINC00408-201ENST00000447784 R3HDM1Q15032 1099 aaKnown RBP15.42■□□□□ 0.06
LINC00408-201ENST00000447784 PNNQ9H307 717 aaKnown RBP15.42■□□□□ 0.06
LINC00408-201ENST00000447784 PSDA5PKW4 1024 aaPredicted RBP15.41■□□□□ 0.06
LINC00408-201ENST00000447784 NEFMP07197 916 aa15.41■□□□□ 0.06
LINC00408-201ENST00000447784 HMOX1P09601 288 aa15.41■□□□□ 0.06
LINC00408-201ENST00000447784 PROM2Q8N271 834 aa15.41■□□□□ 0.06
LINC00408-201ENST00000447784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC00408-201ENST00000447784 IGSF1Q8N6C5 1336 aa15.41■□□□□ 0.06
LINC00408-201ENST00000447784 PCDH11XQ9BZA7 1347 aa15.41■□□□□ 0.06
LINC00408-201ENST00000447784 PCDH11YQ9BZA8 1340 aa15.41■□□□□ 0.06
LINC00408-201ENST00000447784 PLEKHG2Q9H7P9 1386 aa15.4■□□□□ 0.06
LINC00408-201ENST00000447784 TXNRD1Q16881 649 aa15.4■□□□□ 0.06
LINC00408-201ENST00000447784 SBF2Q86WG5 1849 aa15.4■□□□□ 0.06
LINC00408-201ENST00000447784 RGPD3A6NKT7 1758 aaPredicted RBP15.39■□□□□ 0.05
LINC00408-201ENST00000447784 RGPD4Q7Z3J3 1758 aa15.39■□□□□ 0.05
LINC00408-201ENST00000447784 RREB1Q92766 1687 aa15.39■□□□□ 0.05
LINC00408-201ENST00000447784 NHSQ6T4R5 1651 aa15.38■□□□□ 0.05
LINC00408-201ENST00000447784 FCHSD2O94868 740 aa15.38■□□□□ 0.05
LINC00408-201ENST00000447784 PRIM1P49642 420 aaKnown RBP15.38■□□□□ 0.05
LINC00408-201ENST00000447784 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
LINC00408-201ENST00000447784 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
LINC00408-201ENST00000447784 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
LINC00408-201ENST00000447784 CYP27B1O15528 508 aa15.37■□□□□ 0.05
LINC00408-201ENST00000447784 COL3A1P02461 1466 aaPredicted RBP15.37■□□□□ 0.05
LINC00408-201ENST00000447784 RGPD2P0DJD1 1756 aa15.36■□□□□ 0.05
LINC00408-201ENST00000447784 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
LINC00408-201ENST00000447784 NKX1-1Q15270 411 aaPredicted RBP15.36■□□□□ 0.05
LINC00408-201ENST00000447784 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
LINC00408-201ENST00000447784 PNISRQ8TF01 805 aaKnown RBP15.36■□□□□ 0.05
LINC00408-201ENST00000447784 MAP2P11137 1827 aaKnown RBP15.36■□□□□ 0.05
LINC00408-201ENST00000447784 AMOTQ4VCS5 1084 aa15.35■□□□□ 0.05
LINC00408-201ENST00000447784 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
LINC00408-201ENST00000447784 SYTL4Q96C24 671 aaPredicted RBP15.35■□□□□ 0.05
LINC00408-201ENST00000447784 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
LINC00408-201ENST00000447784 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
LINC00408-201ENST00000447784 MAPK8IP3Q9UPT6 1336 aa15.35■□□□□ 0.05
LINC00408-201ENST00000447784 NUP188Q5SRE5 1749 aa15.34■□□□□ 0.05
LINC00408-201ENST00000447784 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
LINC00408-201ENST00000447784 RSPH6AQ9H0K4 717 aa15.34■□□□□ 0.05
LINC00408-201ENST00000447784 KDRP35968 1356 aa15.33■□□□□ 0.04
LINC00408-201ENST00000447784 SRCAPQ6ZRS2 3230 aa15.32■□□□□ 0.04
LINC00408-201ENST00000447784 SHANK3Q9BYB0 1731 aa15.32■□□□□ 0.04
LINC00408-201ENST00000447784 SLC15A2Q16348 729 aa15.32■□□□□ 0.04
LINC00408-201ENST00000447784 IFNL2Q8IZJ0 200 aa15.32■□□□□ 0.04
LINC00408-201ENST00000447784 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
LINC00408-201ENST00000447784 PHKG2P15735 406 aa15.31■□□□□ 0.04
LINC00408-201ENST00000447784 C1orf141Q5JVX7 400 aa15.31■□□□□ 0.04
LINC00408-201ENST00000447784 LRRC4BQ9NT99 713 aa15.31■□□□□ 0.04
LINC00408-201ENST00000447784 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
LINC00408-201ENST00000447784 PKD1L3Q7Z443 1732 aa15.3■□□□□ 0.04
LINC00408-201ENST00000447784 CCDC146Q8IYE0 955 aa15.3■□□□□ 0.04
LINC00408-201ENST00000447784 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
LINC00408-201ENST00000447784 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
LINC00408-201ENST00000447784 LRP5O75197 1615 aa15.29■□□□□ 0.04
LINC00408-201ENST00000447784 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
LINC00408-201ENST00000447784 BTAF1O14981 1849 aa15.29■□□□□ 0.04
LINC00408-201ENST00000447784 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
LINC00408-201ENST00000447784 MTHFSDQ2M296 383 aaKnown RBP15.28■□□□□ 0.04
LINC00408-201ENST00000447784 MPRIPQ6WCQ1 1025 aa15.28■□□□□ 0.04
LINC00408-201ENST00000447784 PHACTR3Q96KR7 559 aa15.28■□□□□ 0.04
LINC00408-201ENST00000447784 DOT1LQ8TEK3 1739 aa15.27■□□□□ 0.04
LINC00408-201ENST00000447784 SMARCC1Q92922 1105 aaPredicted RBP15.27■□□□□ 0.04
LINC00408-201ENST00000447784 PLEKHF1Q96S99 279 aa15.27■□□□□ 0.04
LINC00408-201ENST00000447784 SPON1Q9HCB6 807 aa15.27■□□□□ 0.04
LINC00408-201ENST00000447784 AKAP4Q5JQC9 854 aa15.26■□□□□ 0.03
LINC00408-201ENST00000447784 PIGBQ92521 554 aa15.26■□□□□ 0.03
LINC00408-201ENST00000447784 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
LINC00408-201ENST00000447784 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms