RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 MMRN1Q13201 1228 aa8.58□□□□□ -1.04
PTPN3-205ENST00000447271 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
PTPN3-205ENST00000447271 CABLES1Q8TDN4 633 aa8.58□□□□□ -1.04
PTPN3-205ENST00000447271 MCOLN1Q9GZU1 580 aa8.58□□□□□ -1.04
PTPN3-205ENST00000447271 COL24A1Q17RW2 1714 aa8.57□□□□□ -1.04
PTPN3-205ENST00000447271 COL6A3P12111 3177 aa8.57□□□□□ -1.04
PTPN3-205ENST00000447271 SBF2Q86WG5 1849 aa8.57□□□□□ -1.04
PTPN3-205ENST00000447271 SZT2Q5T011 3432 aa8.57□□□□□ -1.04
PTPN3-205ENST00000447271 PLEKHH2Q8IVE3 1493 aa8.57□□□□□ -1.04
PTPN3-205ENST00000447271 ERBB3P21860 1342 aa8.56□□□□□ -1.04
PTPN3-205ENST00000447271 ADAMTS13Q76LX8 1427 aa8.56□□□□□ -1.04
PTPN3-205ENST00000447271 ZSWIM6Q9HCJ5 1215 aa8.56□□□□□ -1.04
PTPN3-205ENST00000447271 VIRMAQ69YN4 1812 aaKnown RBP8.56□□□□□ -1.04
PTPN3-205ENST00000447271 MYO5BQ9ULV0 1848 aa8.56□□□□□ -1.04
PTPN3-205ENST00000447271 RIMBP2O15034 1052 aa8.55□□□□□ -1.04
PTPN3-205ENST00000447271 FOXO3O43524 673 aa8.55□□□□□ -1.04
PTPN3-205ENST00000447271 TXNRD1Q16881 649 aa8.55□□□□□ -1.04
PTPN3-205ENST00000447271 NBPF15Q8N660 670 aa8.55□□□□□ -1.04
PTPN3-205ENST00000447271 CCER1Q8TC90 406 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-205ENST00000447271 ZFYVE9O95405 1425 aa8.54□□□□□ -1.04
PTPN3-205ENST00000447271 XRN1Q8IZH2 1706 aaKnown RBP8.54□□□□□ -1.04
PTPN3-205ENST00000447271 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
PTPN3-205ENST00000447271 MEGF6O75095 1541 aa8.54□□□□□ -1.04
PTPN3-205ENST00000447271 CEP162Q5TB80 1403 aa8.54□□□□□ -1.04
PTPN3-205ENST00000447271 PXDNLA1KZ92 1463 aa8.53□□□□□ -1.04
PTPN3-205ENST00000447271 COL9A1P20849 921 aa8.53□□□□□ -1.04
PTPN3-205ENST00000447271 HDGFP51858 240 aaKnown RBP8.53□□□□□ -1.04
PTPN3-205ENST00000447271 C10orf71Q711Q0 1435 aa8.53□□□□□ -1.04
PTPN3-205ENST00000447271 SPATA31A3Q5VYP0 1347 aa8.53□□□□□ -1.04
PTPN3-205ENST00000447271 CNTNAP1P78357 1384 aa8.52□□□□□ -1.05
PTPN3-205ENST00000447271 ESCO1Q5FWF5 840 aa8.52□□□□□ -1.05
PTPN3-205ENST00000447271 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-205ENST00000447271 PRDM6Q9NQX0 595 aa8.52□□□□□ -1.05
PTPN3-205ENST00000447271 RIMS2Q9UQ26 1411 aa8.52□□□□□ -1.05
PTPN3-205ENST00000447271 MTUS2Q5JR59 1369 aa8.51□□□□□ -1.05
PTPN3-205ENST00000447271 TNRC6CQ9HCJ0 1690 aaKnown RBP8.51□□□□□ -1.05
PTPN3-205ENST00000447271 NUDT7P0C024 238 aa8.51□□□□□ -1.05
PTPN3-205ENST00000447271 PLA2G5P39877 138 aa8.51□□□□□ -1.05
PTPN3-205ENST00000447271 PTF1AQ7RTS3 328 aa8.51□□□□□ -1.05
PTPN3-205ENST00000447271 TMC2Q8TDI7 906 aa8.51□□□□□ -1.05
PTPN3-205ENST00000447271 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
PTPN3-205ENST00000447271 SPATA31A1Q5TZJ5 1347 aa8.51□□□□□ -1.05
PTPN3-205ENST00000447271 KCPQ6ZWJ8 1503 aa8.5□□□□□ -1.05
PTPN3-205ENST00000447271 CASP8AP2Q9UKL3 1982 aa8.5□□□□□ -1.05
PTPN3-205ENST00000447271 VEGFBP49765 207 aa8.5□□□□□ -1.05
PTPN3-205ENST00000447271 FAM122AQ96E09 287 aa8.5□□□□□ -1.05
PTPN3-205ENST00000447271 COL14A1Q05707 1796 aaKnown RBP8.5□□□□□ -1.05
PTPN3-205ENST00000447271 KDM2BQ8NHM5 1336 aa8.5□□□□□ -1.05
PTPN3-205ENST00000447271 LMTK2Q8IWU2 1503 aa8.49□□□□□ -1.05
PTPN3-205ENST00000447271 LRRIQ1Q96JM4 1722 aa8.49□□□□□ -1.05
PTPN3-205ENST00000447271 ARHGAP31Q2M1Z3 1444 aa8.49□□□□□ -1.05
PTPN3-205ENST00000447271 RRBP1Q9P2E9 1410 aaKnown RBP8.49□□□□□ -1.05
PTPN3-205ENST00000447271 ZNF316A6NFI3 1004 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-205ENST00000447271 PCDHGA4Q9Y5G9 962 aa8.49□□□□□ -1.05
PTPN3-205ENST00000447271 LRPPRCP42704 1394 aaKnown RBP8.48□□□□□ -1.05
PTPN3-205ENST00000447271 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-205ENST00000447271 DGKZQ13574 1117 aa8.48□□□□□ -1.05
PTPN3-205ENST00000447271 DSG2Q14126 1118 aa8.48□□□□□ -1.05
PTPN3-205ENST00000447271 POTEEQ6S8J3 1075 aa8.48□□□□□ -1.05
PTPN3-205ENST00000447271 ZNF687Q8N1G0 1237 aa8.48□□□□□ -1.05
PTPN3-205ENST00000447271 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
PTPN3-205ENST00000447271 PRXQ9BXM0 1461 aa8.48□□□□□ -1.05
PTPN3-205ENST00000447271 TECPR2O15040 1411 aa8.47□□□□□ -1.05
PTPN3-205ENST00000447271 GTPBP6O43824 516 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-205ENST00000447271 CFDP1Q9UEE9 299 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-205ENST00000447271 MAP2K1Q02750 393 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-205ENST00000447271 GPHNQ9NQX3 736 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-205ENST00000447271 RAPGEFL1Q9UHV5 662 aa8.46□□□□□ -1.06
PTPN3-205ENST00000447271 LHX6Q9UPM6 363 aa8.46□□□□□ -1.06
PTPN3-205ENST00000447271 CD2APQ9Y5K6 639 aa8.46□□□□□ -1.06
PTPN3-205ENST00000447271 FOXK1P85037 733 aa8.45□□□□□ -1.06
PTPN3-205ENST00000447271 ZNF827Q17R98 1081 aa8.45□□□□□ -1.06
PTPN3-205ENST00000447271 PLPP6Q8IY26 295 aa8.45□□□□□ -1.06
PTPN3-205ENST00000447271 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPN3-205ENST00000447271 CLSPNQ9HAW4 1339 aa8.45□□□□□ -1.06
PTPN3-205ENST00000447271 PEAK1Q9H792 1746 aa8.45□□□□□ -1.06
PTPN3-205ENST00000447271 OVOS2A0A0G2JMS6 1433 aa8.45□□□□□ -1.06
PTPN3-205ENST00000447271 OVOS2A0A0J9YW53 1432 aa8.45□□□□□ -1.06
PTPN3-205ENST00000447271 OVOS2Q6IE36 1432 aa8.45□□□□□ -1.06
PTPN3-205ENST00000447271 DUOX2Q9NRD8 1548 aa8.44□□□□□ -1.06
PTPN3-205ENST00000447271 PKD1L3Q7Z443 1732 aa8.44□□□□□ -1.06
PTPN3-205ENST00000447271 LMOD2Q6P5Q4 547 aa8.44□□□□□ -1.06
PTPN3-205ENST00000447271 CRISPLD2Q9H0B8 497 aa8.44□□□□□ -1.06
PTPN3-205ENST00000447271 IGSF1Q8N6C5 1336 aa8.44□□□□□ -1.06
PTPN3-205ENST00000447271 ACIN1Q9UKV3 1341 aaKnown RBP8.44□□□□□ -1.06
PTPN3-205ENST00000447271 KIF15Q9NS87 1388 aa8.44□□□□□ -1.06
PTPN3-205ENST00000447271 PAPPAQ13219 1627 aa8.43□□□□□ -1.06
PTPN3-205ENST00000447271 GCC2Q8IWJ2 1684 aa8.43□□□□□ -1.06
PTPN3-205ENST00000447271 TRIOBPQ9H2D6 2365 aa8.43□□□□□ -1.06
PTPN3-205ENST00000447271 QSER1Q2KHR3 1735 aa8.43□□□□□ -1.06
PTPN3-205ENST00000447271 PLEKHG2Q9H7P9 1386 aa8.43□□□□□ -1.06
PTPN3-205ENST00000447271 UNC80Q8N2C7 3258 aa8.43□□□□□ -1.06
PTPN3-205ENST00000447271 MBD5Q9P267 1494 aa8.43□□□□□ -1.06
PTPN3-205ENST00000447271 BARGINQ6ZT62 677 aa8.42□□□□□ -1.06
PTPN3-205ENST00000447271 BEGAINQ9BUH8 593 aa8.42□□□□□ -1.06
PTPN3-205ENST00000447271 STRN4Q9NRL3 753 aa8.42□□□□□ -1.06
PTPN3-205ENST00000447271 TSKSQ9UJT2 592 aa8.42□□□□□ -1.06
PTPN3-205ENST00000447271 VPS8Q8N3P4 1428 aa8.42□□□□□ -1.06
PTPN3-205ENST00000447271 PHRF1Q9P1Y6 1649 aaKnown RBP8.41□□□□□ -1.06
PTPN3-205ENST00000447271 TNS3Q68CZ2 1445 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms