RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 PRIM1P49642 420 aaKnown RBP28.67■■■□□ 2.18
APTR-205ENST00000447009 USHBP1Q8N6Y0 703 aa28.67■■■□□ 2.18
APTR-205ENST00000447009 SYT17Q9BSW7 474 aa28.67■■■□□ 2.18
APTR-205ENST00000447009 LY75O60449 1722 aa28.66■■■□□ 2.18
APTR-205ENST00000447009 ZCRB1Q8TBF4 217 aaKnown RBP28.66■■■□□ 2.18
APTR-205ENST00000447009 KCNQ4P56696 695 aa28.65■■■□□ 2.18
APTR-205ENST00000447009 TRIM26Q12899 539 aaPredicted RBP28.65■■■□□ 2.18
APTR-205ENST00000447009 SLC27A3Q5K4L6 730 aa28.65■■■□□ 2.18
APTR-205ENST00000447009 AKT1S1Q96B36 256 aa28.65■■■□□ 2.18
APTR-205ENST00000447009 SMG6Q86US8 1419 aaKnown RBP28.65■■■□□ 2.18
APTR-205ENST00000447009 NSD2O96028 1365 aa28.64■■■□□ 2.18
APTR-205ENST00000447009 ARXQ96QS3 562 aa28.64■■■□□ 2.18
APTR-205ENST00000447009 NBPF6Q5VWK0 638 aa28.63■■■□□ 2.17
APTR-205ENST00000447009 NBPF4Q96M43 638 aa28.63■■■□□ 2.17
APTR-205ENST00000447009 PNPLA7Q6ZV29 1317 aa28.6■■■□□ 2.17
APTR-205ENST00000447009 RAPGEF4Q8WZA2 1011 aa28.58■■■□□ 2.17
APTR-205ENST00000447009 CDCA8Q53HL2 280 aa28.57■■■□□ 2.16
APTR-205ENST00000447009 HSP90AB2PQ58FF8 381 aa28.57■■■□□ 2.16
APTR-205ENST00000447009 TFCP2L1Q9NZI6 479 aa28.57■■■□□ 2.16
APTR-205ENST00000447009 INSRP06213 1382 aa28.56■■■□□ 2.16
APTR-205ENST00000447009 FLT4P35916 1363 aa28.56■■■□□ 2.16
APTR-205ENST00000447009 COL24A1Q17RW2 1714 aa28.56■■■□□ 2.16
APTR-205ENST00000447009 KLHL34Q8N239 644 aa28.56■■■□□ 2.16
APTR-205ENST00000447009 NSD3Q9BZ95 1437 aa28.56■■■□□ 2.16
APTR-205ENST00000447009 CHD4Q14839 1912 aa28.55■■■□□ 2.16
APTR-205ENST00000447009 MAP3K5Q99683 1374 aa28.55■■■□□ 2.16
APTR-205ENST00000447009 CGNL1Q0VF96 1302 aa28.55■■■□□ 2.16
APTR-205ENST00000447009 TATP17735 454 aaPredicted RBP28.55■■■□□ 2.16
APTR-205ENST00000447009 CCNL1Q9UK58 526 aaPredicted RBP28.55■■■□□ 2.16
APTR-205ENST00000447009 SLC16A10Q8TF71 515 aa28.53■■■□□ 2.16
APTR-205ENST00000447009 POLD1P28340 1107 aa28.52■■■□□ 2.16
APTR-205ENST00000447009 CARD14Q9BXL6 1004 aa28.52■■■□□ 2.16
APTR-205ENST00000447009 EMILIN1Q9Y6C2 1016 aa28.51■■■□□ 2.15
APTR-205ENST00000447009 C5P01031 1676 aa28.51■■■□□ 2.15
APTR-205ENST00000447009 PCDH11XQ9BZA7 1347 aa28.5■■■□□ 2.15
APTR-205ENST00000447009 PCDH11YQ9BZA8 1340 aa28.5■■■□□ 2.15
APTR-205ENST00000447009 KIF24Q5T7B8 1368 aa28.5■■■□□ 2.15
APTR-205ENST00000447009 TOGARAM1Q9Y4F4 1720 aa28.49■■■□□ 2.15
APTR-205ENST00000447009 PKD1L3Q7Z443 1732 aa28.48■■■□□ 2.15
APTR-205ENST00000447009 ANKRD26Q9UPS8 1709 aa28.48■■■□□ 2.15
APTR-205ENST00000447009 MSH5O43196 834 aa28.47■■■□□ 2.15
APTR-205ENST00000447009 ZNF784Q8NCA9 323 aaPredicted RBP28.47■■■□□ 2.15
APTR-205ENST00000447009 ITGB4P16144 1822 aa28.47■■■□□ 2.15
APTR-205ENST00000447009 TAF1LQ8IZX4 1826 aa28.46■■■□□ 2.15
APTR-205ENST00000447009 PPM1GO15355 546 aaPredicted RBP28.45■■■□□ 2.14
APTR-205ENST00000447009 GPR162Q16538 588 aa28.45■■■□□ 2.14
APTR-205ENST00000447009 MAP2P11137 1827 aaKnown RBP28.44■■■□□ 2.14
APTR-205ENST00000447009 PALLDQ8WX93 1383 aa28.43■■■□□ 2.14
APTR-205ENST00000447009 CYP27B1O15528 508 aa28.43■■■□□ 2.14
APTR-205ENST00000447009 PELP1Q8IZL8 1130 aaKnown RBP28.43■■■□□ 2.14
APTR-205ENST00000447009 MPRIPQ6WCQ1 1025 aa28.42■■■□□ 2.14
APTR-205ENST00000447009 COL23A1Q86Y22 540 aaPredicted RBP28.42■■■□□ 2.14
APTR-205ENST00000447009 MSL1Q68DK7 614 aa28.41■■■□□ 2.14
APTR-205ENST00000447009 NLGN2Q8NFZ4 835 aa28.41■■■□□ 2.14
APTR-205ENST00000447009 POLR3GLQ9BT43 218 aa28.41■■■□□ 2.14
APTR-205ENST00000447009 NCAPD2Q15021 1401 aa28.39■■■□□ 2.14
APTR-205ENST00000447009 PCGF6Q9BYE7 350 aa28.37■■■□□ 2.13
APTR-205ENST00000447009 C4BP0C0L5 1744 aa28.37■■■□□ 2.13
APTR-205ENST00000447009 UTRNP46939 3433 aa28.37■■■□□ 2.13
APTR-205ENST00000447009 TIMELESSQ9UNS1 1208 aa28.36■■■□□ 2.13
APTR-205ENST00000447009 WASHC2AQ641Q2 1341 aa28.34■■■□□ 2.13
APTR-205ENST00000447009 EYA1Q99502 592 aa28.33■■■□□ 2.13
APTR-205ENST00000447009 SPG7Q9UQ90 795 aa28.33■■■□□ 2.13
APTR-205ENST00000447009 SMARCC1Q92922 1105 aaPredicted RBP28.32■■■□□ 2.12
APTR-205ENST00000447009 TNNT2P45379 298 aaPredicted RBP28.31■■■□□ 2.12
APTR-205ENST00000447009 PIGBQ92521 554 aa28.31■■■□□ 2.12
APTR-205ENST00000447009 POLKQ9UBT6 870 aa28.31■■■□□ 2.12
APTR-205ENST00000447009 UBR3Q6ZT12 1888 aa28.31■■■□□ 2.12
APTR-205ENST00000447009 AK7Q96M32 723 aa28.3■■■□□ 2.12
APTR-205ENST00000447009 CLSPNQ9HAW4 1339 aa28.29■■■□□ 2.12
APTR-205ENST00000447009 NKX1-1Q15270 411 aaPredicted RBP28.28■■■□□ 2.12
APTR-205ENST00000447009 FLAD1Q8NFF5 587 aa28.28■■■□□ 2.12
APTR-205ENST00000447009 PHF14O94880 888 aa28.27■■■□□ 2.12
APTR-205ENST00000447009 YBX3P16989 372 aaKnown RBP eCLIP28.27■■■□□ 2.12
APTR-205ENST00000447009 AMIGO3Q86WK7 504 aa28.27■■■□□ 2.12
APTR-205ENST00000447009 HMGB2P26583 209 aaKnown RBP28.26■■■□□ 2.11
APTR-205ENST00000447009 SMIM5Q71RC9 77 aa28.26■■■□□ 2.11
APTR-205ENST00000447009 EIF4A2Q14240 407 aaKnown RBP28.25■■■□□ 2.11
APTR-205ENST00000447009 TMOD3Q9NYL9 352 aa28.25■■■□□ 2.11
APTR-205ENST00000447009 PHKG2P15735 406 aa28.23■■■□□ 2.11
APTR-205ENST00000447009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.23■■■□□ 2.116e-6■□□□□ 8.9
APTR-205ENST00000447009 LOC102724428A0A0B4J2F2 783 aa28.22■■■□□ 2.11
APTR-205ENST00000447009 SIK1P57059 783 aa28.22■■■□□ 2.11
APTR-205ENST00000447009 IFNL2Q8IZJ0 200 aa28.22■■■□□ 2.11
APTR-205ENST00000447009 LINC00116Q8NCU8 138 aa28.22■■■□□ 2.11
APTR-205ENST00000447009 HSPA5P11021 654 aaKnown RBP28.21■■■□□ 2.11
APTR-205ENST00000447009 ASAP1Q9ULH1 1129 aa28.21■■■□□ 2.11
APTR-205ENST00000447009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.2■■■□□ 2.1
APTR-205ENST00000447009 EIF4G2P78344 907 aaKnown RBP eCLIP28.2■■■□□ 2.1
APTR-205ENST00000447009 GRIN3BO60391 1043 aa28.19■■■□□ 2.1
APTR-205ENST00000447009 CD2APQ9Y5K6 639 aa28.19■■■□□ 2.1
APTR-205ENST00000447009 C1QTNF8P60827 252 aa28.18■■■□□ 2.1
APTR-205ENST00000447009 ITPK1Q13572 414 aa28.18■■■□□ 2.1
APTR-205ENST00000447009 PANK3Q9H999 370 aa28.18■■■□□ 2.1
APTR-205ENST00000447009 IGSF1Q8N6C5 1336 aa28.17■■■□□ 2.1
APTR-205ENST00000447009 SENP3-EIF4A1A0A087X0R7 540 aa28.16■■■□□ 2.1
APTR-205ENST00000447009 SSFA2P28290 1259 aa28.16■■■□□ 2.1
APTR-205ENST00000447009 ATP6V1AP38606 617 aa28.16■■■□□ 2.1
APTR-205ENST00000447009 GNPATO15228 680 aa28.15■■■□□ 2.1
APTR-205ENST00000447009 ATG3Q9NT62 314 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms