RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 MAP2P11137 1827 aaKnown RBP15.57■□□□□ 0.08
CDCA3-203ENST00000446553 DDX54Q8TDD1 881 aaKnown RBP15.56■□□□□ 0.08
CDCA3-203ENST00000446553 RAPGEF4Q8WZA2 1011 aa15.56■□□□□ 0.08
CDCA3-203ENST00000446553 ACSBG1Q96GR2 724 aa15.56■□□□□ 0.08
CDCA3-203ENST00000446553 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
CDCA3-203ENST00000446553 PLEKHG2Q9H7P9 1386 aa15.55■□□□□ 0.08
CDCA3-203ENST00000446553 TATP17735 454 aaPredicted RBP15.55■□□□□ 0.08
CDCA3-203ENST00000446553 SPON1Q9HCB6 807 aa15.55■□□□□ 0.08
CDCA3-203ENST00000446553 EMILIN1Q9Y6C2 1016 aa15.55■□□□□ 0.08
CDCA3-203ENST00000446553 SLC15A2Q16348 729 aa15.54■□□□□ 0.08
CDCA3-203ENST00000446553 SLC27A3Q5K4L6 730 aa15.54■□□□□ 0.08
CDCA3-203ENST00000446553 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
CDCA3-203ENST00000446553 PAPPAQ13219 1627 aa15.54■□□□□ 0.08
CDCA3-203ENST00000446553 PANK3Q9H999 370 aa15.53■□□□□ 0.08
CDCA3-203ENST00000446553 POLKQ9UBT6 870 aa15.53■□□□□ 0.08
CDCA3-203ENST00000446553 PCDH11XQ9BZA7 1347 aa15.52■□□□□ 0.08
CDCA3-203ENST00000446553 PCDH11YQ9BZA8 1340 aa15.52■□□□□ 0.08
CDCA3-203ENST00000446553 DOT1LQ8TEK3 1739 aa15.51■□□□□ 0.07
CDCA3-203ENST00000446553 USHBP1Q8N6Y0 703 aa15.51■□□□□ 0.07
CDCA3-203ENST00000446553 POLR3GLQ9BT43 218 aa15.51■□□□□ 0.07
CDCA3-203ENST00000446553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDCA3-203ENST00000446553 PKD1L3Q7Z443 1732 aa15.51■□□□□ 0.07
CDCA3-203ENST00000446553 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
CDCA3-203ENST00000446553 PRIM1P49642 420 aaKnown RBP15.5■□□□□ 0.07
CDCA3-203ENST00000446553 LY75O60449 1722 aa15.49■□□□□ 0.07
CDCA3-203ENST00000446553 QSER1Q2KHR3 1735 aa15.48■□□□□ 0.07
CDCA3-203ENST00000446553 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
CDCA3-203ENST00000446553 LRRC4BQ9NT99 713 aa15.48■□□□□ 0.07
CDCA3-203ENST00000446553 CYP27B1O15528 508 aa15.47■□□□□ 0.07
CDCA3-203ENST00000446553 NKX1-1Q15270 411 aaPredicted RBP15.47■□□□□ 0.07
CDCA3-203ENST00000446553 EYA1Q99502 592 aa15.47■□□□□ 0.07
CDCA3-203ENST00000446553 MTFR1LQ9H019 292 aa15.47■□□□□ 0.07
CDCA3-203ENST00000446553 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
CDCA3-203ENST00000446553 SYTL4Q96C24 671 aaPredicted RBP15.46■□□□□ 0.07
CDCA3-203ENST00000446553 SPG7Q9UQ90 795 aa15.46■□□□□ 0.07
CDCA3-203ENST00000446553 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
CDCA3-203ENST00000446553 KIF7Q2M1P5 1343 aa15.45■□□□□ 0.06
CDCA3-203ENST00000446553 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
CDCA3-203ENST00000446553 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
CDCA3-203ENST00000446553 PDGFDQ9GZP0 370 aaPredicted RBP15.45■□□□□ 0.06
CDCA3-203ENST00000446553 PPP1R1BQ9UD71 204 aaPredicted RBP15.45■□□□□ 0.06
CDCA3-203ENST00000446553 IGSF1Q8N6C5 1336 aa15.44■□□□□ 0.06
CDCA3-203ENST00000446553 PTGER2P43116 358 aa15.44■□□□□ 0.06
CDCA3-203ENST00000446553 MORC1Q86VD1 984 aa15.44■□□□□ 0.06
CDCA3-203ENST00000446553 ZNF827Q17R98 1081 aa15.43■□□□□ 0.06
CDCA3-203ENST00000446553 AMER1Q5JTC6 1135 aaPredicted RBP15.43■□□□□ 0.06
CDCA3-203ENST00000446553 SGIP1Q9BQI5 828 aa15.43■□□□□ 0.06
CDCA3-203ENST00000446553 ZBTB7AO95365 584 aa15.42■□□□□ 0.06
CDCA3-203ENST00000446553 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
CDCA3-203ENST00000446553 SMARCC1Q92922 1105 aaPredicted RBP15.42■□□□□ 0.06
CDCA3-203ENST00000446553 ITGB4P16144 1822 aa15.42■□□□□ 0.06
CDCA3-203ENST00000446553 COL24A1Q17RW2 1714 aa15.41■□□□□ 0.06
CDCA3-203ENST00000446553 TOGARAM1Q9Y4F4 1720 aa15.41■□□□□ 0.06
CDCA3-203ENST00000446553 IFNL2Q8IZJ0 200 aa15.41■□□□□ 0.06
CDCA3-203ENST00000446553 CCNL1Q9UK58 526 aaPredicted RBP15.41■□□□□ 0.06
CDCA3-203ENST00000446553 PER1O15534 1290 aaPredicted RBP15.4■□□□□ 0.06
CDCA3-203ENST00000446553 MAP3K5Q99683 1374 aa15.39■□□□□ 0.05
CDCA3-203ENST00000446553 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
CDCA3-203ENST00000446553 PHKG2P15735 406 aa15.39■□□□□ 0.05
CDCA3-203ENST00000446553 ATF5Q9Y2D1 282 aaPredicted RBP15.39■□□□□ 0.05
CDCA3-203ENST00000446553 PNPLA7Q6ZV29 1317 aa15.39■□□□□ 0.05
CDCA3-203ENST00000446553 TUBGCP6Q96RT7 1819 aa15.38■□□□□ 0.05
CDCA3-203ENST00000446553 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
CDCA3-203ENST00000446553 MPRIPQ6WCQ1 1025 aa15.38■□□□□ 0.05
CDCA3-203ENST00000446553 TFCP2L1Q9NZI6 479 aa15.38■□□□□ 0.05
CDCA3-203ENST00000446553 TAF1LQ8IZX4 1826 aa15.38■□□□□ 0.05
CDCA3-203ENST00000446553 KDRP35968 1356 aa15.37■□□□□ 0.05
CDCA3-203ENST00000446553 HSP90AB1P08238 724 aaKnown RBP15.37■□□□□ 0.05
CDCA3-203ENST00000446553 AMOTQ4VCS5 1084 aa15.37■□□□□ 0.05
CDCA3-203ENST00000446553 PIGBQ92521 554 aa15.37■□□□□ 0.05
CDCA3-203ENST00000446553 C5P01031 1676 aa15.37■□□□□ 0.05
CDCA3-203ENST00000446553 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
CDCA3-203ENST00000446553 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
CDCA3-203ENST00000446553 FLAD1Q8NFF5 587 aa15.36■□□□□ 0.05
CDCA3-203ENST00000446553 ERVV-2B6SEH9 535 aa15.35■□□□□ 0.05
CDCA3-203ENST00000446553 IL13P35225 146 aa15.35■□□□□ 0.05
CDCA3-203ENST00000446553 KCNQ4P56696 695 aa15.35■□□□□ 0.05
CDCA3-203ENST00000446553 DCAF5Q96JK2 942 aa15.35■□□□□ 0.05
CDCA3-203ENST00000446553 ARXQ96QS3 562 aa15.35■□□□□ 0.05
CDCA3-203ENST00000446553 TMOD3Q9NYL9 352 aa15.35■□□□□ 0.05
CDCA3-203ENST00000446553 SYT17Q9BSW7 474 aa15.34■□□□□ 0.05
CDCA3-203ENST00000446553 FHDC1Q9C0D6 1143 aaPredicted RBP15.33■□□□□ 0.04
CDCA3-203ENST00000446553 ZNF831Q5JPB2 1677 aa15.32■□□□□ 0.04
CDCA3-203ENST00000446553 LOC102724428A0A0B4J2F2 783 aa15.32■□□□□ 0.04
CDCA3-203ENST00000446553 POLD1P28340 1107 aa15.32■□□□□ 0.04
CDCA3-203ENST00000446553 SIK1P57059 783 aa15.32■□□□□ 0.04
CDCA3-203ENST00000446553 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
CDCA3-203ENST00000446553 MTHFSP49914 203 aa15.31■□□□□ 0.04
CDCA3-203ENST00000446553 SULT6B1Q6IMI4 303 aa15.31■□□□□ 0.04
CDCA3-203ENST00000446553 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
CDCA3-203ENST00000446553 COL23A1Q86Y22 540 aaPredicted RBP15.3■□□□□ 0.04
CDCA3-203ENST00000446553 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
CDCA3-203ENST00000446553 UBR3Q6ZT12 1888 aa15.29■□□□□ 0.04
CDCA3-203ENST00000446553 KDM6AO15550 1401 aaPredicted RBP15.29■□□□□ 0.04
CDCA3-203ENST00000446553 C1orf141Q5JVX7 400 aa15.29■□□□□ 0.04
CDCA3-203ENST00000446553 ATG3Q9NT62 314 aa15.29■□□□□ 0.04
CDCA3-203ENST00000446553 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
CDCA3-203ENST00000446553 SSFA2P28290 1259 aa15.28■□□□□ 0.04
CDCA3-203ENST00000446553 AK7Q96M32 723 aa15.28■□□□□ 0.04
CDCA3-203ENST00000446553 UTRNP46939 3433 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms