RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 ATRNO75882 1429 aa22.98■■□□□ 1.27
SGCE-206ENST00000445866 NCAPD2Q15021 1401 aa22.98■■□□□ 1.27
SGCE-206ENST00000445866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.97■■□□□ 1.272e-6■□□□□ 8.1
SGCE-206ENST00000445866 RRP7AQ9Y3A4 280 aaKnown RBP22.97■■□□□ 1.27
SGCE-206ENST00000445866 SALL2Q9Y467 1007 aaPredicted RBP22.97■■□□□ 1.27
SGCE-206ENST00000445866 RBM6P78332 1123 aaKnown RBP22.97■■□□□ 1.27
SGCE-206ENST00000445866 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
SGCE-206ENST00000445866 RXRBP28702 533 aa22.96■■□□□ 1.27
SGCE-206ENST00000445866 TMPOP42166 694 aaKnown RBP22.96■■□□□ 1.27
SGCE-206ENST00000445866 NFE2L2Q16236 605 aa22.96■■□□□ 1.27
SGCE-206ENST00000445866 POTEAQ6S8J7 498 aa22.96■■□□□ 1.27
SGCE-206ENST00000445866 DDX54Q8TDD1 881 aaKnown RBP22.96■■□□□ 1.27
SGCE-206ENST00000445866 RIPK4P57078 832 aa22.95■■□□□ 1.26
SGCE-206ENST00000445866 ZNF530Q6P9A1 599 aaPredicted RBP22.95■■□□□ 1.26
SGCE-206ENST00000445866 ONECUT3O60422 494 aaPredicted RBP22.94■■□□□ 1.26
SGCE-206ENST00000445866 DDB1Q16531 1140 aa22.94■■□□□ 1.26
SGCE-206ENST00000445866 HNRNPUQ00839 825 aaKnown RBP eCLIP22.93■■□□□ 1.26
SGCE-206ENST00000445866 YTHDC1Q96MU7 727 aaKnown RBP22.93■■□□□ 1.26
SGCE-206ENST00000445866 PLCH1Q4KWH8 1693 aa22.92■■□□□ 1.26
SGCE-206ENST00000445866 C1orf141Q5JVX7 400 aa22.92■■□□□ 1.26
SGCE-206ENST00000445866 SEPT12Q8IYM1 358 aa22.92■■□□□ 1.26
SGCE-206ENST00000445866 MEGF6O75095 1541 aa22.92■■□□□ 1.26
SGCE-206ENST00000445866 RGPD5Q99666 1765 aa22.92■■□□□ 1.26
SGCE-206ENST00000445866 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
SGCE-206ENST00000445866 NWD2Q9ULI1 1742 aa22.9■■□□□ 1.26
SGCE-206ENST00000445866 OVOS2A0A0G2JMS6 1433 aa22.9■■□□□ 1.26
SGCE-206ENST00000445866 CYP27B1O15528 508 aa22.9■■□□□ 1.26
SGCE-206ENST00000445866 PDE3BQ13370 1112 aa22.9■■□□□ 1.26
SGCE-206ENST00000445866 AKAP4Q5JQC9 854 aa22.9■■□□□ 1.26
SGCE-206ENST00000445866 DISP2A7MBM2 1401 aa22.89■■□□□ 1.25
SGCE-206ENST00000445866 GNAT3A8MTJ3 354 aa22.89■■□□□ 1.25
SGCE-206ENST00000445866 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
SGCE-206ENST00000445866 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
SGCE-206ENST00000445866 PHKG2P15735 406 aa22.88■■□□□ 1.25
SGCE-206ENST00000445866 PCDH11XQ9BZA7 1347 aa22.88■■□□□ 1.25
SGCE-206ENST00000445866 PCDH11YQ9BZA8 1340 aa22.88■■□□□ 1.25
SGCE-206ENST00000445866 NGEFQ8N5V2 710 aa22.87■■□□□ 1.25
SGCE-206ENST00000445866 NRAPQ86VF7 1730 aa22.86■■□□□ 1.25
SGCE-206ENST00000445866 PLEKHG2Q9H7P9 1386 aa22.86■■□□□ 1.25
SGCE-206ENST00000445866 MPRIPQ6WCQ1 1025 aa22.86■■□□□ 1.25
SGCE-206ENST00000445866 TRIM35Q9UPQ4 493 aa22.86■■□□□ 1.25
SGCE-206ENST00000445866 HTATSF1O43719 755 aaKnown RBP22.85■■□□□ 1.25
SGCE-206ENST00000445866 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
SGCE-206ENST00000445866 NCBP3Q53F19 620 aaKnown RBP22.85■■□□□ 1.25
SGCE-206ENST00000445866 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
SGCE-206ENST00000445866 DCTN1Q14203 1278 aa22.84■■□□□ 1.25
SGCE-206ENST00000445866 MARCH10Q8NA82 808 aaPredicted RBP22.84■■□□□ 1.25
SGCE-206ENST00000445866 MCM10Q7L590 875 aa22.84■■□□□ 1.25
SGCE-206ENST00000445866 WWC1Q8IX03 1113 aa22.84■■□□□ 1.25
SGCE-206ENST00000445866 LGR6Q9HBX8 967 aa22.84■■□□□ 1.25
SGCE-206ENST00000445866 CCDC27Q2M243 656 aa22.83■■□□□ 1.24
SGCE-206ENST00000445866 IL17REQ8NFR9 667 aa22.83■■□□□ 1.24
SGCE-206ENST00000445866 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
SGCE-206ENST00000445866 MAP3K5Q99683 1374 aa22.82■■□□□ 1.24
SGCE-206ENST00000445866 FAM208AQ9UK61 1670 aaKnown RBP22.82■■□□□ 1.24
SGCE-206ENST00000445866 NKX1-1Q15270 411 aaPredicted RBP22.81■■□□□ 1.24
SGCE-206ENST00000445866 THUMPD2Q9BTF0 503 aaKnown RBP22.81■■□□□ 1.24
SGCE-206ENST00000445866 RNMTO43148 476 aaKnown RBP22.81■■□□□ 1.24
SGCE-206ENST00000445866 RGPD2P0DJD1 1756 aa22.8■■□□□ 1.24
SGCE-206ENST00000445866 GLI3P10071 1580 aa22.79■■□□□ 1.24
SGCE-206ENST00000445866 KRT27Q7Z3Y8 459 aa22.79■■□□□ 1.24
SGCE-206ENST00000445866 FAM182BQ5T319 152 aa22.78■■□□□ 1.24
SGCE-206ENST00000445866 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.78■■□□□ 1.24
SGCE-206ENST00000445866 TNS2Q63HR2 1409 aa22.77■■□□□ 1.24
SGCE-206ENST00000445866 WDR63Q8IWG1 891 aa22.77■■□□□ 1.24
SGCE-206ENST00000445866 CALD1Q05682 793 aaKnown RBP22.76■■□□□ 1.23
SGCE-206ENST00000445866 TEFQ10587 303 aa22.76■■□□□ 1.23
SGCE-206ENST00000445866 CABP4P57796 275 aa22.75■■□□□ 1.23
SGCE-206ENST00000445866 ERVV-2B6SEH9 535 aa22.74■■□□□ 1.23
SGCE-206ENST00000445866 LAS1LQ9Y4W2 734 aaKnown RBP22.74■■□□□ 1.23
SGCE-206ENST00000445866 GOLGA2Q08379 1002 aa22.74■■□□□ 1.23
SGCE-206ENST00000445866 NFATC2IPQ8NCF5 419 aa22.74■■□□□ 1.23
SGCE-206ENST00000445866 ZBED9Q6R2W3 1325 aa22.74■■□□□ 1.23
SGCE-206ENST00000445866 PRIM1P49642 420 aaKnown RBP22.73■■□□□ 1.23
SGCE-206ENST00000445866 TAF7Q15545 349 aaPredicted RBP22.73■■□□□ 1.23
SGCE-206ENST00000445866 SYTL4Q96C24 671 aaPredicted RBP22.73■■□□□ 1.23
SGCE-206ENST00000445866 ACSBG1Q96GR2 724 aa22.73■■□□□ 1.23
SGCE-206ENST00000445866 ZNF521Q96K83 1311 aa22.73■■□□□ 1.23
SGCE-206ENST00000445866 SLC52A2Q9HAB3 445 aa22.71■■□□□ 1.23
SGCE-206ENST00000445866 CEMIPQ8WUJ3 1361 aa22.71■■□□□ 1.23
SGCE-206ENST00000445866 FAM196AQ6ZSG2 479 aa22.71■■□□□ 1.23
SGCE-206ENST00000445866 MIS18AQ9NYP9 233 aa22.71■■□□□ 1.23
SGCE-206ENST00000445866 CDCA7LQ96GN5 454 aa22.7■■□□□ 1.22
SGCE-206ENST00000445866 IL16Q14005 1332 aa22.69■■□□□ 1.22
SGCE-206ENST00000445866 TMOD3Q9NYL9 352 aa22.69■■□□□ 1.22
SGCE-206ENST00000445866 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
SGCE-206ENST00000445866 GNAI1P63096 354 aa22.68■■□□□ 1.22
SGCE-206ENST00000445866 CFAP44Q96MT7 982 aa22.68■■□□□ 1.22
SGCE-206ENST00000445866 SPINK5Q9NQ38 1064 aaPredicted RBP22.68■■□□□ 1.22
SGCE-206ENST00000445866 RGS12O14924 1447 aa22.68■■□□□ 1.22
SGCE-206ENST00000445866 BTBD11A6QL63 1104 aa22.68■■□□□ 1.22
SGCE-206ENST00000445866 KCNQ2O43526 872 aa22.68■■□□□ 1.22
SGCE-206ENST00000445866 IFT57Q9NWB7 429 aa22.68■■□□□ 1.22
SGCE-206ENST00000445866 E9PSI1 815 aa22.67■■□□□ 1.22
SGCE-206ENST00000445866 PIGBQ92521 554 aa22.67■■□□□ 1.22
SGCE-206ENST00000445866 CHL1O00533 1208 aa22.66■■□□□ 1.22
SGCE-206ENST00000445866 SLFN5Q08AF3 891 aa22.66■■□□□ 1.22
SGCE-206ENST00000445866 TSPYL4Q9UJ04 414 aa22.66■■□□□ 1.22
SGCE-206ENST00000445866 ZNF853P0CG23 659 aa22.65■■□□□ 1.22
SGCE-206ENST00000445866 MYH16Q9H6N6 1097 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms