RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 KIAA2012Q0VF49 1180 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 NEXNQ0ZGT2 675 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 DCTN1Q14203 1278 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 ELOAQ14241 798 aaKnown RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 PPP2R5AQ15172 486 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 ENOX2Q16206 610 aaKnown RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 MSL1Q68DK7 614 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 KLHL10Q6JEL2 608 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 ZNF467Q7Z7K2 595 aaPredicted RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 LCA5Q86VQ0 697 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 TEX19Q8NA77 164 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 ATL2Q8NHH9 583 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 PMFBP1Q8TBY8 1022 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 ENOX1Q8TC92 643 aaKnown RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 TSC1Q92574 1164 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 AKT1S1Q96B36 256 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 CFAP53Q96M91 514 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 PIF1Q9H611 641 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 AVENQ9NQS1 362 aaPredicted RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 ZNF69Q9UC07 566 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 ACAD8Q9UKU7 415 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 IQSEC3Q9UPP2 1182 aaPredicted RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 MRVI1Q9Y6F6 885 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 IGF1RP08069 1367 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 PALM3A6NDB9 673 aaPredicted RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 PABPN1LA6NDY0 278 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 LDHAP00338 332 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 KRT18P05783 430 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 LDHCP07864 332 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 HNRNPCP07910 306 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 NEFHP12036 1026 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 LMOD1P29536 600 aaPredicted RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 FLT3P36888 993 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 TRAPPC10P48553 1259 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 HIC1Q14526 733 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 BMS1Q14692 1282 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 DIXDC1Q155Q3 683 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 UVSSAQ2YD98 709 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 CDCA8Q53HL2 280 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 NOM1Q5C9Z4 860 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 CCDC73Q6ZRK6 1079 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 ANKRD13DQ6ZTN6 518 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 JAZF1Q86VZ6 243 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 RPUSD2Q8IZ73 545 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 CCDC89Q8N998 374 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 MTMR14Q8NCE2 650 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 VPS37AQ8NEZ2 397 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 GMLQ99445 158 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 APBA2Q99767 749 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 LARP6Q9BRS8 491 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 ZNF700Q9H0M5 742 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 METTL5Q9NRN9 209 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 PUF60Q9UHX1 559 aaKnown RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 CLEC11AQ9Y240 323 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 LZTS1Q9Y250 596 aa3.44□□□□□ -1.86
UBBP3-201ENST00000445497 CENPJQ9HC77 1338 aaPredicted RBP3.44□□□□□ -1.86
UBBP3-201ENST00000445497 HIP1RO75146 1068 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 C7P10643 843 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 NOS2P35228 1153 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 CLK2P49760 499 aaKnown RBP3.43□□□□□ -1.86
UBBP3-201ENST00000445497 MAP2K1Q02750 393 aaPredicted RBP3.43□□□□□ -1.86
UBBP3-201ENST00000445497 SEMA3FQ13275 785 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 FAM133BQ5BKY9 247 aaKnown RBP3.43□□□□□ -1.86
UBBP3-201ENST00000445497 CC2D1AQ6P1N0 951 aaPredicted RBP3.43□□□□□ -1.86
UBBP3-201ENST00000445497 CATIPQ7Z7H3 387 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 ZSCAN29Q8IWY8 852 aaPredicted RBP3.43□□□□□ -1.86
UBBP3-201ENST00000445497 LMNTD2Q8IXW0 634 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 GOLGA1Q92805 767 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 FAM210AQ96ND0 272 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 BACH2Q9BYV9 841 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 YY1AP1Q9H869 796 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 CAPN10Q9HC96 672 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 CREBZFQ9NS37 354 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 DDX41Q9UJV9 622 aaKnown RBP3.43□□□□□ -1.86
UBBP3-201ENST00000445497 FBXO2Q9UK22 296 aaPredicted RBP3.43□□□□□ -1.86
UBBP3-201ENST00000445497 ASAP1Q9ULH1 1129 aa3.43□□□□□ -1.86
UBBP3-201ENST00000445497 CTDP1Q9Y5B0 961 aaPredicted RBP3.43□□□□□ -1.86
UBBP3-201ENST00000445497 FAM170AA1A519 330 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 TRIM6-TRIM34B2RNG4 842 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 GOLGA6L22H0YM25 854 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 VAMP4O75379 141 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 FCHSD2O94868 740 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 MYL1P05976 194 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 FOSL1P15407 271 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 CASQ1P31415 396 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 CTHP32929 405 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 SOX11P35716 441 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 GNALP38405 381 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 USP5P45974 858 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 ARID5AQ03989 594 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 RAD51AP2Q09MP3 1159 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 PSMD2Q13200 908 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 MRPL58Q14197 206 aaKnown RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 MAP9Q49MG5 647 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 EAPPQ56P03 285 aaPredicted RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 TTC39BQ5VTQ0 682 aaPredicted RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 CCDC70Q6NSX1 233 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 UBE2Q1Q7Z7E8 422 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 FERMT3Q86UX7 667 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms