RNA–Protein interactions for RNA: ENST00000445279.5

LINC01939-201, Transcript of long intergenic non-protein coding RNA 1939, humanhuman

TSL 5 BASIC

Gene LINC01939, Length 694 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01939-201ENST00000445279 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
LINC01939-201ENST00000445279 FLT4P35916 1363 aa21.06■□□□□ 0.96
LINC01939-201ENST00000445279 SMG6Q86US8 1419 aaKnown RBP21.05■□□□□ 0.96
LINC01939-201ENST00000445279 MEGF6O75095 1541 aa21.05■□□□□ 0.96
LINC01939-201ENST00000445279 TATP17735 454 aaPredicted RBP21.05■□□□□ 0.96
LINC01939-201ENST00000445279 YY1P25490 414 aa21.04■□□□□ 0.96
LINC01939-201ENST00000445279 SLC16A10Q8TF71 515 aa21.04■□□□□ 0.96
LINC01939-201ENST00000445279 SYT17Q9BSW7 474 aa21.04■□□□□ 0.96
LINC01939-201ENST00000445279 NHSQ6T4R5 1651 aa21.03■□□□□ 0.96
LINC01939-201ENST00000445279 NSD2O96028 1365 aa21.03■□□□□ 0.96
LINC01939-201ENST00000445279 FHDC1Q9C0D6 1143 aaPredicted RBP21.03■□□□□ 0.96
LINC01939-201ENST00000445279 NSD3Q9BZ95 1437 aa21.03■□□□□ 0.96
LINC01939-201ENST00000445279 ARXQ96QS3 562 aa21.02■□□□□ 0.96
LINC01939-201ENST00000445279 EMILIN1Q9Y6C2 1016 aa21.02■□□□□ 0.96
LINC01939-201ENST00000445279 LTN1O94822 1766 aa21.02■□□□□ 0.96
LINC01939-201ENST00000445279 CASZ1Q86V15 1759 aa21■□□□□ 0.95
LINC01939-201ENST00000445279 KCNQ4P56696 695 aa21■□□□□ 0.95
LINC01939-201ENST00000445279 TFCP2L1Q9NZI6 479 aa21■□□□□ 0.95
LINC01939-201ENST00000445279 WASHC2AQ641Q2 1341 aa21■□□□□ 0.95
LINC01939-201ENST00000445279 CCNL1Q9UK58 526 aaPredicted RBP20.99■□□□□ 0.95
LINC01939-201ENST00000445279 PNPLA7Q6ZV29 1317 aa20.99■□□□□ 0.95
LINC01939-201ENST00000445279 PCDH11XQ9BZA7 1347 aa20.99■□□□□ 0.95
LINC01939-201ENST00000445279 PCDH11YQ9BZA8 1340 aa20.99■□□□□ 0.95
LINC01939-201ENST00000445279 CYP27B1O15528 508 aa20.98■□□□□ 0.95
LINC01939-201ENST00000445279 PPM1GO15355 546 aaPredicted RBP20.97■□□□□ 0.95
LINC01939-201ENST00000445279 HMGB2P26583 209 aaKnown RBP20.97■□□□□ 0.95
LINC01939-201ENST00000445279 EIF4G2P78344 907 aaKnown RBP eCLIP20.97■□□□□ 0.95
LINC01939-201ENST00000445279 POLKQ9UBT6 870 aa20.97■□□□□ 0.95
LINC01939-201ENST00000445279 MAP3K5Q99683 1374 aa20.96■□□□□ 0.95
LINC01939-201ENST00000445279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.95■□□□□ 0.94
LINC01939-201ENST00000445279 PAPPAQ13219 1627 aa20.95■□□□□ 0.94
LINC01939-201ENST00000445279 FAM208AQ9UK61 1670 aaKnown RBP20.95■□□□□ 0.94
LINC01939-201ENST00000445279 NKX1-1Q15270 411 aaPredicted RBP20.94■□□□□ 0.94
LINC01939-201ENST00000445279 EYA1Q99502 592 aa20.94■□□□□ 0.94
LINC01939-201ENST00000445279 HSPA5P11021 654 aaKnown RBP20.93■□□□□ 0.94
LINC01939-201ENST00000445279 POLD1P28340 1107 aa20.93■□□□□ 0.94
LINC01939-201ENST00000445279 SPG7Q9UQ90 795 aa20.93■□□□□ 0.94
LINC01939-201ENST00000445279 MPRIPQ6WCQ1 1025 aa20.92■□□□□ 0.94
LINC01939-201ENST00000445279 POLR3GLQ9BT43 218 aa20.92■□□□□ 0.94
LINC01939-201ENST00000445279 NCAPD2Q15021 1401 aa20.92■□□□□ 0.94
LINC01939-201ENST00000445279 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
LINC01939-201ENST00000445279 SMARCC1Q92922 1105 aaPredicted RBP20.9■□□□□ 0.94
LINC01939-201ENST00000445279 PANK3Q9H999 370 aa20.9■□□□□ 0.94
LINC01939-201ENST00000445279 BTAF1O14981 1849 aa20.9■□□□□ 0.94
LINC01939-201ENST00000445279 COL23A1Q86Y22 540 aaPredicted RBP20.89■□□□□ 0.93
LINC01939-201ENST00000445279 PIGBQ92521 554 aa20.89■□□□□ 0.93
LINC01939-201ENST00000445279 PALLDQ8WX93 1383 aa20.88■□□□□ 0.93
LINC01939-201ENST00000445279 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
LINC01939-201ENST00000445279 EIF4A2Q14240 407 aaKnown RBP20.87■□□□□ 0.93
LINC01939-201ENST00000445279 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
LINC01939-201ENST00000445279 MYOM1P52179 1685 aa20.86■□□□□ 0.93
LINC01939-201ENST00000445279 UTRNP46939 3433 aa20.85■□□□□ 0.93
LINC01939-201ENST00000445279 MSH5O43196 834 aa20.85■□□□□ 0.93
LINC01939-201ENST00000445279 IFNL2Q8IZJ0 200 aa20.85■□□□□ 0.93
LINC01939-201ENST00000445279 PHKG2P15735 406 aa20.84■□□□□ 0.93
LINC01939-201ENST00000445279 PLEKHG2Q9H7P9 1386 aa20.84■□□□□ 0.93
LINC01939-201ENST00000445279 GPR162Q16538 588 aa20.82■□□□□ 0.92
LINC01939-201ENST00000445279 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
LINC01939-201ENST00000445279 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
LINC01939-201ENST00000445279 LOC102724428A0A0B4J2F2 783 aa20.81■□□□□ 0.92
LINC01939-201ENST00000445279 SIK1P57059 783 aa20.81■□□□□ 0.92
LINC01939-201ENST00000445279 ZNF784Q8NCA9 323 aaPredicted RBP20.81■□□□□ 0.92
LINC01939-201ENST00000445279 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
LINC01939-201ENST00000445279 MORC1Q86VD1 984 aa20.79■□□□□ 0.92
LINC01939-201ENST00000445279 NLGN2Q8NFZ4 835 aa20.79■□□□□ 0.92
LINC01939-201ENST00000445279 AK7Q96M32 723 aa20.79■□□□□ 0.92
LINC01939-201ENST00000445279 ASAP1Q9ULH1 1129 aa20.79■□□□□ 0.92
LINC01939-201ENST00000445279 SHANK3Q9BYB0 1731 aa20.78■□□□□ 0.92
LINC01939-201ENST00000445279 MSL1Q68DK7 614 aa20.78■□□□□ 0.92
LINC01939-201ENST00000445279 KNSTRNQ9Y448 316 aa20.78■□□□□ 0.92
LINC01939-201ENST00000445279 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
LINC01939-201ENST00000445279 AMIGO3Q86WK7 504 aa20.77■□□□□ 0.92
LINC01939-201ENST00000445279 ATG3Q9NT62 314 aa20.77■□□□□ 0.92
LINC01939-201ENST00000445279 ERVV-2B6SEH9 535 aa20.76■□□□□ 0.91
LINC01939-201ENST00000445279 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
LINC01939-201ENST00000445279 AMOTQ4VCS5 1084 aa20.76■□□□□ 0.91
LINC01939-201ENST00000445279 PLEKHO1Q53GL0 409 aaPredicted RBP20.76■□□□□ 0.91
LINC01939-201ENST00000445279 DCAF5Q96JK2 942 aa20.76■□□□□ 0.91
LINC01939-201ENST00000445279 CD2APQ9Y5K6 639 aa20.76■□□□□ 0.91
LINC01939-201ENST00000445279 RGPD2P0DJD1 1756 aa20.76■□□□□ 0.91
LINC01939-201ENST00000445279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
LINC01939-201ENST00000445279 SSFA2P28290 1259 aa20.75■□□□□ 0.91
LINC01939-201ENST00000445279 LINC00116Q8NCU8 138 aa20.75■□□□□ 0.91
LINC01939-201ENST00000445279 KIF20BQ96Q89 1820 aa20.75■□□□□ 0.91
LINC01939-201ENST00000445279 LY75O60449 1722 aa20.74■□□□□ 0.91
LINC01939-201ENST00000445279 ATP6V1AP38606 617 aa20.74■□□□□ 0.91
LINC01939-201ENST00000445279 ITPK1Q13572 414 aa20.74■□□□□ 0.91
LINC01939-201ENST00000445279 GRIN3BO60391 1043 aa20.73■□□□□ 0.91
LINC01939-201ENST00000445279 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
LINC01939-201ENST00000445279 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
LINC01939-201ENST00000445279 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
LINC01939-201ENST00000445279 PHF14O94880 888 aa20.71■□□□□ 0.91
LINC01939-201ENST00000445279 KAT6BQ8WYB5 2073 aa20.7■□□□□ 0.9
LINC01939-201ENST00000445279 YBX3P16989 372 aaKnown RBP eCLIP20.7■□□□□ 0.9
LINC01939-201ENST00000445279 IL13P35225 146 aa20.7■□□□□ 0.9
LINC01939-201ENST00000445279 ZNF530Q6P9A1 599 aaPredicted RBP20.7■□□□□ 0.9
LINC01939-201ENST00000445279 AEBP1Q8IUX7 1158 aa20.7■□□□□ 0.9
LINC01939-201ENST00000445279 ANKRD26Q9UPS8 1709 aa20.7■□□□□ 0.9
LINC01939-201ENST00000445279 GNPATO15228 680 aa20.69■□□□□ 0.9
LINC01939-201ENST00000445279 SLC4A9Q96Q91 983 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms