RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
SMARCAL1-210ENST00000445153 ARXQ96QS3 562 aa19.9■□□□□ 0.78
SMARCAL1-210ENST00000445153 NSD2O96028 1365 aa19.9■□□□□ 0.78
SMARCAL1-210ENST00000445153 SLC27A3Q5K4L6 730 aa19.89■□□□□ 0.77
SMARCAL1-210ENST00000445153 USP47Q96K76 1375 aa19.89■□□□□ 0.77
SMARCAL1-210ENST00000445153 SHANK3Q9BYB0 1731 aa19.89■□□□□ 0.77
SMARCAL1-210ENST00000445153 PNPLA7Q6ZV29 1317 aa19.88■□□□□ 0.77
SMARCAL1-210ENST00000445153 TMF1P82094 1093 aa19.88■□□□□ 0.77
SMARCAL1-210ENST00000445153 DOT1LQ8TEK3 1739 aa19.86■□□□□ 0.77
SMARCAL1-210ENST00000445153 HSP90AB2PQ58FF8 381 aa19.86■□□□□ 0.77
SMARCAL1-210ENST00000445153 CARD14Q9BXL6 1004 aa19.86■□□□□ 0.77
SMARCAL1-210ENST00000445153 RTL1A6NKG5 1358 aa19.85■□□□□ 0.77
SMARCAL1-210ENST00000445153 SLC16A10Q8TF71 515 aa19.83■□□□□ 0.77
SMARCAL1-210ENST00000445153 TFCP2L1Q9NZI6 479 aa19.83■□□□□ 0.77
SMARCAL1-210ENST00000445153 MAP3K5Q99683 1374 aa19.83■□□□□ 0.76
SMARCAL1-210ENST00000445153 LY75O60449 1722 aa19.82■□□□□ 0.76
SMARCAL1-210ENST00000445153 ZNF784Q8NCA9 323 aaPredicted RBP19.82■□□□□ 0.76
SMARCAL1-210ENST00000445153 INSRP06213 1382 aa19.82■□□□□ 0.76
SMARCAL1-210ENST00000445153 TUBGCP6Q96RT7 1819 aa19.81■□□□□ 0.76
SMARCAL1-210ENST00000445153 UTRNP46939 3433 aa19.81■□□□□ 0.76
SMARCAL1-210ENST00000445153 CCNL1Q9UK58 526 aaPredicted RBP19.81■□□□□ 0.76
SMARCAL1-210ENST00000445153 QSER1Q2KHR3 1735 aa19.81■□□□□ 0.76
SMARCAL1-210ENST00000445153 RAPGEF4Q8WZA2 1011 aa19.8■□□□□ 0.76
SMARCAL1-210ENST00000445153 COL24A1Q17RW2 1714 aa19.79■□□□□ 0.76
SMARCAL1-210ENST00000445153 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
SMARCAL1-210ENST00000445153 EMILIN1Q9Y6C2 1016 aa19.79■□□□□ 0.76
SMARCAL1-210ENST00000445153 CGNL1Q0VF96 1302 aa19.78■□□□□ 0.76
SMARCAL1-210ENST00000445153 CYP27B1O15528 508 aa19.78■□□□□ 0.76
SMARCAL1-210ENST00000445153 COL23A1Q86Y22 540 aaPredicted RBP19.78■□□□□ 0.76
SMARCAL1-210ENST00000445153 KLHL34Q8N239 644 aa19.78■□□□□ 0.76
SMARCAL1-210ENST00000445153 FLT4P35916 1363 aa19.78■□□□□ 0.76
SMARCAL1-210ENST00000445153 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
SMARCAL1-210ENST00000445153 KIF20BQ96Q89 1820 aa19.76■□□□□ 0.75
SMARCAL1-210ENST00000445153 CDCA8Q53HL2 280 aa19.76■□□□□ 0.75
SMARCAL1-210ENST00000445153 NLGN2Q8NFZ4 835 aa19.76■□□□□ 0.75
SMARCAL1-210ENST00000445153 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
SMARCAL1-210ENST00000445153 POLD1P28340 1107 aa19.75■□□□□ 0.75
SMARCAL1-210ENST00000445153 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
SMARCAL1-210ENST00000445153 GPR162Q16538 588 aa19.74■□□□□ 0.75
SMARCAL1-210ENST00000445153 MPRIPQ6WCQ1 1025 aa19.74■□□□□ 0.75
SMARCAL1-210ENST00000445153 PCDH11XQ9BZA7 1347 aa19.74■□□□□ 0.75
SMARCAL1-210ENST00000445153 PCDH11YQ9BZA8 1340 aa19.74■□□□□ 0.75
SMARCAL1-210ENST00000445153 MSH5O43196 834 aa19.72■□□□□ 0.75
SMARCAL1-210ENST00000445153 MSL1Q68DK7 614 aa19.72■□□□□ 0.75
SMARCAL1-210ENST00000445153 CHD4Q14839 1912 aa19.71■□□□□ 0.75
SMARCAL1-210ENST00000445153 PPM1GO15355 546 aaPredicted RBP19.71■□□□□ 0.75
SMARCAL1-210ENST00000445153 TOGARAM1Q9Y4F4 1720 aa19.71■□□□□ 0.75
SMARCAL1-210ENST00000445153 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
SMARCAL1-210ENST00000445153 NCAPD2Q15021 1401 aa19.7■□□□□ 0.74
SMARCAL1-210ENST00000445153 SMIM5Q71RC9 77 aa19.7■□□□□ 0.74
SMARCAL1-210ENST00000445153 AMIGO3Q86WK7 504 aa19.7■□□□□ 0.74
SMARCAL1-210ENST00000445153 PELP1Q8IZL8 1130 aaKnown RBP19.7■□□□□ 0.74
SMARCAL1-210ENST00000445153 EYA1Q99502 592 aa19.7■□□□□ 0.74
SMARCAL1-210ENST00000445153 PIGBQ92521 554 aa19.69■□□□□ 0.74
SMARCAL1-210ENST00000445153 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
SMARCAL1-210ENST00000445153 POLKQ9UBT6 870 aa19.69■□□□□ 0.74
SMARCAL1-210ENST00000445153 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
SMARCAL1-210ENST00000445153 YBX3P16989 372 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMARCAL1-210ENST00000445153 NKX1-1Q15270 411 aaPredicted RBP19.68■□□□□ 0.74
SMARCAL1-210ENST00000445153 C5P01031 1676 aa19.68■□□□□ 0.74
SMARCAL1-210ENST00000445153 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
SMARCAL1-210ENST00000445153 PKD1L3Q7Z443 1732 aa19.67■□□□□ 0.74
SMARCAL1-210ENST00000445153 ITGB4P16144 1822 aa19.67■□□□□ 0.74
SMARCAL1-210ENST00000445153 TAF1LQ8IZX4 1826 aa19.66■□□□□ 0.74
SMARCAL1-210ENST00000445153 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
SMARCAL1-210ENST00000445153 MAP2P11137 1827 aaKnown RBP19.65■□□□□ 0.74
SMARCAL1-210ENST00000445153 SPG7Q9UQ90 795 aa19.64■□□□□ 0.73
SMARCAL1-210ENST00000445153 TNNT2P45379 298 aaPredicted RBP19.63■□□□□ 0.73
SMARCAL1-210ENST00000445153 SMARCC1Q92922 1105 aaPredicted RBP19.63■□□□□ 0.73
SMARCAL1-210ENST00000445153 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
SMARCAL1-210ENST00000445153 C4BP0C0L5 1744 aa19.62■□□□□ 0.73
SMARCAL1-210ENST00000445153 EIF4A2Q14240 407 aaKnown RBP19.62■□□□□ 0.73
SMARCAL1-210ENST00000445153 FLAD1Q8NFF5 587 aa19.62■□□□□ 0.73
SMARCAL1-210ENST00000445153 ASAP1Q9ULH1 1129 aa19.62■□□□□ 0.73
SMARCAL1-210ENST00000445153 PHKG2P15735 406 aa19.61■□□□□ 0.73
SMARCAL1-210ENST00000445153 C1QTNF8P60827 252 aa19.61■□□□□ 0.73
SMARCAL1-210ENST00000445153 LINC00116Q8NCU8 138 aa19.61■□□□□ 0.73
SMARCAL1-210ENST00000445153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMARCAL1-210ENST00000445153 GOLGB1Q14789 3259 aaKnown RBP19.61■□□□□ 0.73
SMARCAL1-210ENST00000445153 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
SMARCAL1-210ENST00000445153 LOC102724428A0A0B4J2F2 783 aa19.6■□□□□ 0.73
SMARCAL1-210ENST00000445153 PHF14O94880 888 aa19.6■□□□□ 0.73
SMARCAL1-210ENST00000445153 SIK1P57059 783 aa19.6■□□□□ 0.73
SMARCAL1-210ENST00000445153 ITPK1Q13572 414 aa19.6■□□□□ 0.73
SMARCAL1-210ENST00000445153 AK7Q96M32 723 aa19.6■□□□□ 0.73
SMARCAL1-210ENST00000445153 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.59■□□□□ 0.73
SMARCAL1-210ENST00000445153 CD2APQ9Y5K6 639 aa19.59■□□□□ 0.73
SMARCAL1-210ENST00000445153 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.72
SMARCAL1-210ENST00000445153 ATG3Q9NT62 314 aa19.58■□□□□ 0.72
SMARCAL1-210ENST00000445153 TMOD3Q9NYL9 352 aa19.58■□□□□ 0.72
SMARCAL1-210ENST00000445153 UBR3Q6ZT12 1888 aa19.58■□□□□ 0.72
SMARCAL1-210ENST00000445153 GRIN3BO60391 1043 aa19.57■□□□□ 0.72
SMARCAL1-210ENST00000445153 HSPA5P11021 654 aaKnown RBP19.57■□□□□ 0.72
SMARCAL1-210ENST00000445153 PANK3Q9H999 370 aa19.56■□□□□ 0.72
SMARCAL1-210ENST00000445153 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
SMARCAL1-210ENST00000445153 HMGB2P26583 209 aaKnown RBP19.55■□□□□ 0.72
SMARCAL1-210ENST00000445153 ATP6V1AP38606 617 aa19.55■□□□□ 0.72
SMARCAL1-210ENST00000445153 SLC4A9Q96Q91 983 aa19.55■□□□□ 0.72
SMARCAL1-210ENST00000445153 IGSF1Q8N6C5 1336 aa19.54■□□□□ 0.72
SMARCAL1-210ENST00000445153 SSFA2P28290 1259 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms