RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 MEGF6O75095 1541 aa22.87■■□□□ 1.25
TSPAN9-204ENST00000444315 RGPD3A6NKT7 1758 aaPredicted RBP22.86■■□□□ 1.25
TSPAN9-204ENST00000444315 RGPD4Q7Z3J3 1758 aa22.86■■□□□ 1.25
TSPAN9-204ENST00000444315 BCL9O00512 1426 aa22.86■■□□□ 1.25
TSPAN9-204ENST00000444315 KCNQ2O43526 872 aa22.85■■□□□ 1.25
TSPAN9-204ENST00000444315 PTF1AQ7RTS3 328 aa22.85■■□□□ 1.25
TSPAN9-204ENST00000444315 POLKQ9UBT6 870 aa22.85■■□□□ 1.25
TSPAN9-204ENST00000444315 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.25
TSPAN9-204ENST00000444315 DOT1LQ8TEK3 1739 aa22.83■■□□□ 1.25
TSPAN9-204ENST00000444315 BTAF1O14981 1849 aa22.83■■□□□ 1.25
TSPAN9-204ENST00000444315 PLSCR1O15162 318 aa22.83■■□□□ 1.25
TSPAN9-204ENST00000444315 PCDH11XQ9BZA7 1347 aa22.81■■□□□ 1.24
TSPAN9-204ENST00000444315 PCDH11YQ9BZA8 1340 aa22.81■■□□□ 1.24
TSPAN9-204ENST00000444315 SHANK3Q9BYB0 1731 aa22.8■■□□□ 1.24
TSPAN9-204ENST00000444315 CC2D1BQ5T0F9 858 aaKnown RBP22.8■■□□□ 1.24
TSPAN9-204ENST00000444315 TXNRD1Q16881 649 aa22.78■■□□□ 1.24
TSPAN9-204ENST00000444315 SPG7Q9UQ90 795 aa22.78■■□□□ 1.24
TSPAN9-204ENST00000444315 EIF4A2Q14240 407 aaKnown RBP22.77■■□□□ 1.24
TSPAN9-204ENST00000444315 STK32BQ9NY57 414 aa22.77■■□□□ 1.24
TSPAN9-204ENST00000444315 PRIM1P49642 420 aaKnown RBP22.76■■□□□ 1.23
TSPAN9-204ENST00000444315 EYA1Q99502 592 aa22.76■■□□□ 1.23
TSPAN9-204ENST00000444315 LRP5O75197 1615 aa22.73■■□□□ 1.23
TSPAN9-204ENST00000444315 AMER1Q5JTC6 1135 aaPredicted RBP22.73■■□□□ 1.23
TSPAN9-204ENST00000444315 PKD1L3Q7Z443 1732 aa22.73■■□□□ 1.23
TSPAN9-204ENST00000444315 ANO8Q9HCE9 1232 aaPredicted RBP22.7■■□□□ 1.22
TSPAN9-204ENST00000444315 PPP1R1BQ9UD71 204 aaPredicted RBP22.7■■□□□ 1.22
TSPAN9-204ENST00000444315 MPRIPQ6WCQ1 1025 aa22.68■■□□□ 1.22
TSPAN9-204ENST00000444315 PROM2Q8N271 834 aa22.67■■□□□ 1.22
TSPAN9-204ENST00000444315 NCAPD2Q15021 1401 aa22.66■■□□□ 1.22
TSPAN9-204ENST00000444315 IGSF1Q8N6C5 1336 aa22.66■■□□□ 1.22
TSPAN9-204ENST00000444315 CYP27B1O15528 508 aa22.66■■□□□ 1.22
TSPAN9-204ENST00000444315 MTHFSP49914 203 aa22.66■■□□□ 1.22
TSPAN9-204ENST00000444315 SLC15A2Q16348 729 aa22.65■■□□□ 1.22
TSPAN9-204ENST00000444315 PLEKHO1Q53GL0 409 aaPredicted RBP22.65■■□□□ 1.22
TSPAN9-204ENST00000444315 SLC27A3Q5K4L6 730 aa22.65■■□□□ 1.22
TSPAN9-204ENST00000444315 IFNL2Q8IZJ0 200 aa22.65■■□□□ 1.22
TSPAN9-204ENST00000444315 ITGB4P16144 1822 aa22.64■■□□□ 1.22
TSPAN9-204ENST00000444315 SULT6B1Q6IMI4 303 aa22.64■■□□□ 1.21
TSPAN9-204ENST00000444315 SPON1Q9HCB6 807 aa22.64■■□□□ 1.21
TSPAN9-204ENST00000444315 CCNL1Q9UK58 526 aaPredicted RBP22.64■■□□□ 1.21
TSPAN9-204ENST00000444315 PER1O15534 1290 aaPredicted RBP22.63■■□□□ 1.21
TSPAN9-204ENST00000444315 C1orf141Q5JVX7 400 aa22.63■■□□□ 1.21
TSPAN9-204ENST00000444315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.63■■□□□ 1.21
TSPAN9-204ENST00000444315 ZNF530Q6P9A1 599 aaPredicted RBP22.62■■□□□ 1.21
TSPAN9-204ENST00000444315 TMOD3Q9NYL9 352 aa22.62■■□□□ 1.21
TSPAN9-204ENST00000444315 TOGARAM1Q9Y4F4 1720 aa22.62■■□□□ 1.21
TSPAN9-204ENST00000444315 LY75O60449 1722 aa22.61■■□□□ 1.21
TSPAN9-204ENST00000444315 ZBTB7AO95365 584 aa22.61■■□□□ 1.21
TSPAN9-204ENST00000444315 PHKG2P15735 406 aa22.61■■□□□ 1.21
TSPAN9-204ENST00000444315 KCNQ4P56696 695 aa22.61■■□□□ 1.21
TSPAN9-204ENST00000444315 SRCAPQ6ZRS2 3230 aa22.61■■□□□ 1.21
TSPAN9-204ENST00000444315 DIAPH1O60610 1272 aaKnown RBP22.6■■□□□ 1.21
TSPAN9-204ENST00000444315 HSP90AB1P08238 724 aaKnown RBP22.6■■□□□ 1.21
TSPAN9-204ENST00000444315 AMOTQ4VCS5 1084 aa22.6■■□□□ 1.21
TSPAN9-204ENST00000444315 AEBP1Q8IUX7 1158 aa22.6■■□□□ 1.21
TSPAN9-204ENST00000444315 CFAP53Q96M91 514 aa22.6■■□□□ 1.21
TSPAN9-204ENST00000444315 NPC1L1Q9UHC9 1359 aa22.6■■□□□ 1.21
TSPAN9-204ENST00000444315 MSH5O43196 834 aa22.59■■□□□ 1.21
TSPAN9-204ENST00000444315 SMARCC1Q92922 1105 aaPredicted RBP22.59■■□□□ 1.21
TSPAN9-204ENST00000444315 TFCP2L1Q9NZI6 479 aa22.59■■□□□ 1.21
TSPAN9-204ENST00000444315 PALLDQ8WX93 1383 aa22.59■■□□□ 1.21
TSPAN9-204ENST00000444315 U2SURPO15042 1029 aaKnown RBP22.58■■□□□ 1.21
TSPAN9-204ENST00000444315 HMOX1P09601 288 aa22.58■■□□□ 1.21
TSPAN9-204ENST00000444315 IL13P35225 146 aa22.58■■□□□ 1.21
TSPAN9-204ENST00000444315 LRRC4BQ9NT99 713 aa22.58■■□□□ 1.21
TSPAN9-204ENST00000444315 CASZ1Q86V15 1759 aa22.58■■□□□ 1.2
TSPAN9-204ENST00000444315 PAPPAQ13219 1627 aa22.57■■□□□ 1.2
TSPAN9-204ENST00000444315 HMGB2P26583 209 aaKnown RBP22.57■■□□□ 1.2
TSPAN9-204ENST00000444315 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
TSPAN9-204ENST00000444315 ZNF827Q17R98 1081 aa22.56■■□□□ 1.2
TSPAN9-204ENST00000444315 ATF5Q9Y2D1 282 aaPredicted RBP22.56■■□□□ 1.2
TSPAN9-204ENST00000444315 NKX1-1Q15270 411 aaPredicted RBP22.55■■□□□ 1.2
TSPAN9-204ENST00000444315 C5P01031 1676 aa22.55■■□□□ 1.2
TSPAN9-204ENST00000444315 PIGBQ92521 554 aa22.54■■□□□ 1.2
TSPAN9-204ENST00000444315 PDGFDQ9GZP0 370 aaPredicted RBP22.54■■□□□ 1.2
TSPAN9-204ENST00000444315 CABP4P57796 275 aa22.53■■□□□ 1.2
TSPAN9-204ENST00000444315 DCAF5Q96JK2 942 aa22.53■■□□□ 1.2
TSPAN9-204ENST00000444315 MTFR1LQ9H019 292 aa22.52■■□□□ 1.2
TSPAN9-204ENST00000444315 AK7Q96M32 723 aa22.51■■□□□ 1.19
TSPAN9-204ENST00000444315 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
TSPAN9-204ENST00000444315 DCAF8L1A6NGE4 600 aa22.5■■□□□ 1.19
TSPAN9-204ENST00000444315 NUDCQ9Y266 331 aa22.5■■□□□ 1.19
TSPAN9-204ENST00000444315 KDRP35968 1356 aa22.5■■□□□ 1.19
TSPAN9-204ENST00000444315 QSER1Q2KHR3 1735 aa22.49■■□□□ 1.19
TSPAN9-204ENST00000444315 ERVV-2B6SEH9 535 aa22.49■■□□□ 1.19
TSPAN9-204ENST00000444315 AKT1S1Q96B36 256 aa22.49■■□□□ 1.19
TSPAN9-204ENST00000444315 TAF1LQ8IZX4 1826 aa22.48■■□□□ 1.19
TSPAN9-204ENST00000444315 RBM42Q9BTD8 480 aaKnown RBP22.48■■□□□ 1.19
TSPAN9-204ENST00000444315 KLHL34Q8N239 644 aa22.47■■□□□ 1.19
TSPAN9-204ENST00000444315 ASAP1Q9ULH1 1129 aa22.47■■□□□ 1.19
TSPAN9-204ENST00000444315 LOC102724428A0A0B4J2F2 783 aa22.46■■□□□ 1.19
TSPAN9-204ENST00000444315 POLD1P28340 1107 aa22.46■■□□□ 1.19
TSPAN9-204ENST00000444315 ATP6V1AP38606 617 aa22.46■■□□□ 1.19
TSPAN9-204ENST00000444315 SIK1P57059 783 aa22.46■■□□□ 1.19
TSPAN9-204ENST00000444315 AKAP4Q5JQC9 854 aa22.46■■□□□ 1.19
TSPAN9-204ENST00000444315 PPP2R1AP30153 589 aa22.45■■□□□ 1.18
TSPAN9-204ENST00000444315 PNPLA7Q6ZV29 1317 aa22.45■■□□□ 1.18
TSPAN9-204ENST00000444315 C4BP0C0L5 1744 aa22.45■■□□□ 1.18
TSPAN9-204ENST00000444315 KDM6AO15550 1401 aaPredicted RBP22.44■■□□□ 1.18
TSPAN9-204ENST00000444315 PHF14O94880 888 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms