RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 CAVIN2O95810 425 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 PRIM1P49642 420 aaKnown RBP6.06□□□□□ -1.44
SCN11A-202ENST00000444237 KRT85P78386 507 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 ICE2Q659A1 982 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 OLFM4Q6UX06 510 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 RILPL2Q969X0 211 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 PSMD1Q99460 953 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 CD109Q6YHK3 1445 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 ZNF853P0CG23 659 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 NBPF11Q86T75 865 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 CEP57L1Q8IYX8 460 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 PDILTQ8N807 584 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 SMARCE1Q969G3 411 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 RSRC1Q96IZ7 334 aaKnown RBP6.06□□□□□ -1.44
SCN11A-202ENST00000444237 ARAP1Q96P48 1450 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 GOLGA6L10A0A0M3HER8 536 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 GOLGA6L9A6NEM1 432 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 EBAG9O00559 213 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 TTC12Q9H892 705 aaPredicted RBP6.06□□□□□ -1.44
SCN11A-202ENST00000444237 MKRN1Q9UHC7 482 aaKnown RBP6.06□□□□□ -1.44
SCN11A-202ENST00000444237 ZNF644Q9H582 1327 aaPredicted RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 RAPGEF3O95398 923 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 ANKRD18AQ8IVF6 992 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 YY1AP1Q9H869 796 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 ABCA5Q8WWZ7 1642 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 TARBP1Q13395 1621 aaKnown RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 ZSCAN26Q16670 478 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 NBPF8Q3BBV2 869 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 ZNF830Q96NB3 372 aaPredicted RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 SDF4Q9BRK5 362 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 RNF123Q5XPI4 1314 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 CCDC172P0C7W6 258 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 IRX5P78411 483 aaPredicted RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 PRDM4Q9UKN5 801 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 RIPK4P57078 832 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 RNF187Q5TA31 235 aaPredicted RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 CEP120Q8N960 986 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 TMX4Q9H1E5 349 aaPredicted RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 RBM27Q9P2N5 1060 aaKnown RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 KIF14Q15058 1648 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 EHBP1L1Q8N3D4 1523 aa6.05□□□□□ -1.44
SCN11A-202ENST00000444237 PCF11O94913 1555 aaKnown RBP6.05□□□□□ -1.44
SCN11A-202ENST00000444237 NCOA2Q15596 1464 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 CCDC196A0A1B0GTZ2 297 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 IBSPP21815 317 aaPredicted RBP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 TUBB4BP68371 445 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 SYCP1Q15431 976 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 CCDC27Q2M243 656 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 NUTM1Q86Y26 1132 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 API5Q9BZZ5 524 aaKnown RBP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 STK26Q9P289 416 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 NEBLO76041 1014 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 AFAP1Q8N556 730 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 RBM33Q96EV2 1170 aaKnown RBP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 JRKLQ9Y4A0 524 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 PIP4K2BP78356 416 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 GTF3C6Q969F1 213 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 GEMIN8Q9NWZ8 242 aaKnown RBP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 ADAMTS8Q9UP79 889 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 CEP83Q9Y592 693 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 NEXNQ0ZGT2 675 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 SAFB2Q14151 953 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 RBBP5Q15291 538 aaKnown RBP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 WDR63Q8IWG1 891 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 LRPPRCP42704 1394 aaKnown RBP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 CEP170Q5SW79 1584 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 POGZQ7Z3K3 1410 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 FAM177BA6PVY3 158 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 ERC2O15083 957 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 BCAR3O75815 825 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 HSPA4P34932 840 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 MVPQ14764 893 aaKnown RBP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 CEP112Q8N8E3 955 aa6.04□□□□□ -1.44
SCN11A-202ENST00000444237 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCN11A-202ENST00000444237 CLNS1AP54105 237 aaKnown RBP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 NAA25Q14CX7 972 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 ENOX2Q16206 610 aaKnown RBP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 DNAJC21Q5F1R6 531 aaKnown RBP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 CCDC50Q8IVM0 306 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 CCDC150Q8NCX0 1101 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 GOLGA5Q8TBA6 731 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 RUNDC1Q96C34 613 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 NCAPGQ9BPX3 1015 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 RBSNQ9H1K0 784 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 ARHGEF11O15085 1522 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 KCNA4P22459 653 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 EIF5P55010 431 aaKnown RBP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 CHD1LQ86WJ1 897 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 SPATS2LQ9NUQ6 558 aaKnown RBP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 CCDC144AA2RUR9 1427 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 TROQ12816 1431 aaPredicted RBP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 EPRSP07814 1512 aaKnown RBP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 C20orf194Q5TEA3 1177 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 ASXL2Q76L83 1435 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 SCAPERQ9BY12 1400 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 SERPINC1P01008 464 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 TUBBP07437 444 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 ARHGAP29Q52LW3 1261 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms