RNA–Protein interactions for RNA: ENST00000443722.5

PMPCB-203, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-203ENST00000443722 POLKQ9UBT6 870 aa18.26■□□□□ 0.51
PMPCB-203ENST00000443722 LRP5O75197 1615 aa18.26■□□□□ 0.51
PMPCB-203ENST00000443722 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
PMPCB-203ENST00000443722 TATP17735 454 aaPredicted RBP18.23■□□□□ 0.51
PMPCB-203ENST00000443722 KCNQ4P56696 695 aa18.23■□□□□ 0.51
PMPCB-203ENST00000443722 KIF24Q5T7B8 1368 aa18.23■□□□□ 0.51
PMPCB-203ENST00000443722 LRRC4BQ9NT99 713 aa18.23■□□□□ 0.51
PMPCB-203ENST00000443722 WASHC2AQ641Q2 1341 aa18.22■□□□□ 0.51
PMPCB-203ENST00000443722 STK32BQ9NY57 414 aa18.22■□□□□ 0.51
PMPCB-203ENST00000443722 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
PMPCB-203ENST00000443722 RGPD3A6NKT7 1758 aaPredicted RBP18.21■□□□□ 0.51
PMPCB-203ENST00000443722 RGPD4Q7Z3J3 1758 aa18.21■□□□□ 0.51
PMPCB-203ENST00000443722 KAT6BQ8WYB5 2073 aa18.21■□□□□ 0.51
PMPCB-203ENST00000443722 ZBTB7AO95365 584 aa18.21■□□□□ 0.51
PMPCB-203ENST00000443722 SLC15A2Q16348 729 aa18.21■□□□□ 0.51
PMPCB-203ENST00000443722 EYA1Q99502 592 aa18.21■□□□□ 0.51
PMPCB-203ENST00000443722 BTAF1O14981 1849 aa18.19■□□□□ 0.5
PMPCB-203ENST00000443722 CYP27B1O15528 508 aa18.19■□□□□ 0.5
PMPCB-203ENST00000443722 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
PMPCB-203ENST00000443722 ZNF827Q17R98 1081 aa18.19■□□□□ 0.5
PMPCB-203ENST00000443722 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
PMPCB-203ENST00000443722 SPON1Q9HCB6 807 aa18.19■□□□□ 0.5
PMPCB-203ENST00000443722 SHANK3Q9BYB0 1731 aa18.19■□□□□ 0.5
PMPCB-203ENST00000443722 NSD2O96028 1365 aa18.18■□□□□ 0.5
PMPCB-203ENST00000443722 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
PMPCB-203ENST00000443722 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
PMPCB-203ENST00000443722 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
PMPCB-203ENST00000443722 PCDH11XQ9BZA7 1347 aa18.16■□□□□ 0.5
PMPCB-203ENST00000443722 PCDH11YQ9BZA8 1340 aa18.16■□□□□ 0.5
PMPCB-203ENST00000443722 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
PMPCB-203ENST00000443722 DOT1LQ8TEK3 1739 aa18.15■□□□□ 0.5
PMPCB-203ENST00000443722 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
PMPCB-203ENST00000443722 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.5
PMPCB-203ENST00000443722 ANKRD26Q9UPS8 1709 aa18.14■□□□□ 0.5
PMPCB-203ENST00000443722 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
PMPCB-203ENST00000443722 NCAPD2Q15021 1401 aa18.13■□□□□ 0.49
PMPCB-203ENST00000443722 CASZ1Q86V15 1759 aa18.12■□□□□ 0.49
PMPCB-203ENST00000443722 PTGER2P43116 358 aa18.11■□□□□ 0.49
PMPCB-203ENST00000443722 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
PMPCB-203ENST00000443722 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
PMPCB-203ENST00000443722 AKT1S1Q96B36 256 aa18.11■□□□□ 0.49
PMPCB-203ENST00000443722 CCNL1Q9UK58 526 aaPredicted RBP18.11■□□□□ 0.49
PMPCB-203ENST00000443722 SPG7Q9UQ90 795 aa18.11■□□□□ 0.49
PMPCB-203ENST00000443722 PAPPAQ13219 1627 aa18.11■□□□□ 0.49
PMPCB-203ENST00000443722 AEBP1Q8IUX7 1158 aa18.1■□□□□ 0.49
PMPCB-203ENST00000443722 PER1O15534 1290 aaPredicted RBP18.09■□□□□ 0.49
PMPCB-203ENST00000443722 IGSF1Q8N6C5 1336 aa18.08■□□□□ 0.49
PMPCB-203ENST00000443722 PIGBQ92521 554 aa18.08■□□□□ 0.49
PMPCB-203ENST00000443722 TFCP2L1Q9NZI6 479 aa18.08■□□□□ 0.49
PMPCB-203ENST00000443722 PHKG2P15735 406 aa18.07■□□□□ 0.48
PMPCB-203ENST00000443722 MTFR1LQ9H019 292 aa18.07■□□□□ 0.48
PMPCB-203ENST00000443722 PNPLA7Q6ZV29 1317 aa18.07■□□□□ 0.48
PMPCB-203ENST00000443722 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
PMPCB-203ENST00000443722 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
PMPCB-203ENST00000443722 IFNL2Q8IZJ0 200 aa18.05■□□□□ 0.48
PMPCB-203ENST00000443722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.484e-7■■□□□ 12.3
PMPCB-203ENST00000443722 PKD1L3Q7Z443 1732 aa18.05■□□□□ 0.48
PMPCB-203ENST00000443722 TOGARAM1Q9Y4F4 1720 aa18.05■□□□□ 0.48
PMPCB-203ENST00000443722 MTHFSP49914 203 aa18.04■□□□□ 0.48
PMPCB-203ENST00000443722 SULT6B1Q6IMI4 303 aa18.04■□□□□ 0.48
PMPCB-203ENST00000443722 SGIP1Q9BQI5 828 aa18.04■□□□□ 0.48
PMPCB-203ENST00000443722 UTRNP46939 3433 aa18.04■□□□□ 0.48
PMPCB-203ENST00000443722 IL13P35225 146 aa18.03■□□□□ 0.48
PMPCB-203ENST00000443722 SMIM5Q71RC9 77 aa18.03■□□□□ 0.48
PMPCB-203ENST00000443722 ASAP1Q9ULH1 1129 aa18.03■□□□□ 0.48
PMPCB-203ENST00000443722 MSH5O43196 834 aa18.02■□□□□ 0.48
PMPCB-203ENST00000443722 FHDC1Q9C0D6 1143 aaPredicted RBP18.02■□□□□ 0.48
PMPCB-203ENST00000443722 TMOD3Q9NYL9 352 aa18.02■□□□□ 0.48
PMPCB-203ENST00000443722 LY75O60449 1722 aa18.02■□□□□ 0.48
PMPCB-203ENST00000443722 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
PMPCB-203ENST00000443722 PLEKHO1Q53GL0 409 aaPredicted RBP18■□□□□ 0.47
PMPCB-203ENST00000443722 COL23A1Q86Y22 540 aaPredicted RBP18■□□□□ 0.47
PMPCB-203ENST00000443722 ARXQ96QS3 562 aa18■□□□□ 0.47
PMPCB-203ENST00000443722 HMOX1P09601 288 aa17.99■□□□□ 0.47
PMPCB-203ENST00000443722 AMIGO3Q86WK7 504 aa17.99■□□□□ 0.47
PMPCB-203ENST00000443722 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
PMPCB-203ENST00000443722 MSL1Q68DK7 614 aa17.98■□□□□ 0.47
PMPCB-203ENST00000443722 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
PMPCB-203ENST00000443722 SYT17Q9BSW7 474 aa17.98■□□□□ 0.47
PMPCB-203ENST00000443722 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
PMPCB-203ENST00000443722 LOC102724428A0A0B4J2F2 783 aa17.98■□□□□ 0.47
PMPCB-203ENST00000443722 SIK1P57059 783 aa17.98■□□□□ 0.47
PMPCB-203ENST00000443722 ITGB4P16144 1822 aa17.97■□□□□ 0.47
PMPCB-203ENST00000443722 ITPK1Q13572 414 aa17.97■□□□□ 0.47
PMPCB-203ENST00000443722 AMOTQ4VCS5 1084 aa17.97■□□□□ 0.47
PMPCB-203ENST00000443722 LINC00116Q8NCU8 138 aa17.97■□□□□ 0.47
PMPCB-203ENST00000443722 KDM6AO15550 1401 aaPredicted RBP17.96■□□□□ 0.47
PMPCB-203ENST00000443722 TUBGCP6Q96RT7 1819 aa17.96■□□□□ 0.47
PMPCB-203ENST00000443722 PHF14O94880 888 aa17.96■□□□□ 0.46
PMPCB-203ENST00000443722 SLC16A10Q8TF71 515 aa17.96■□□□□ 0.46
PMPCB-203ENST00000443722 DCAF5Q96JK2 942 aa17.96■□□□□ 0.46
PMPCB-203ENST00000443722 KDRP35968 1356 aa17.95■□□□□ 0.46
PMPCB-203ENST00000443722 GOLGB1Q14789 3259 aaKnown RBP17.95■□□□□ 0.46
PMPCB-203ENST00000443722 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
PMPCB-203ENST00000443722 ATP6V1AP38606 617 aa17.95■□□□□ 0.46
PMPCB-203ENST00000443722 CABP4P57796 275 aa17.95■□□□□ 0.46
PMPCB-203ENST00000443722 C1orf141Q5JVX7 400 aa17.95■□□□□ 0.46
PMPCB-203ENST00000443722 AK7Q96M32 723 aa17.95■□□□□ 0.46
PMPCB-203ENST00000443722 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
PMPCB-203ENST00000443722 HSP90AB1P08238 724 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms