RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 LY75O60449 1722 aa29.42■■■□□ 2.3
POLR2J3-202ENST00000443430 DOT1LQ8TEK3 1739 aa29.41■■■□□ 2.3
POLR2J3-202ENST00000443430 NSD2O96028 1365 aa29.4■■■□□ 2.3
POLR2J3-202ENST00000443430 PELP1Q8IZL8 1130 aaKnown RBP29.4■■■□□ 2.3
POLR2J3-202ENST00000443430 NLGN2Q8NFZ4 835 aa29.4■■■□□ 2.3
POLR2J3-202ENST00000443430 SHANK3Q9BYB0 1731 aa29.39■■■□□ 2.3
POLR2J3-202ENST00000443430 MAP3K19Q56UN5 1328 aa29.39■■■□□ 2.3
POLR2J3-202ENST00000443430 RGPD2P0DJD1 1756 aa29.39■■■□□ 2.29
POLR2J3-202ENST00000443430 HOXC9P31274 260 aa29.38■■■□□ 2.29
POLR2J3-202ENST00000443430 FBLN1P23142 703 aa29.37■■■□□ 2.29
POLR2J3-202ENST00000443430 ZCRB1Q8TBF4 217 aaKnown RBP29.36■■■□□ 2.29
POLR2J3-202ENST00000443430 COG3Q96JB2 828 aa29.36■■■□□ 2.29
POLR2J3-202ENST00000443430 GIGYF1O75420 1035 aaPredicted RBP29.35■■■□□ 2.29
POLR2J3-202ENST00000443430 CCNL1Q9UK58 526 aaPredicted RBP29.35■■■□□ 2.29
POLR2J3-202ENST00000443430 AMPHP49418 695 aa29.34■■■□□ 2.29
POLR2J3-202ENST00000443430 MEGF6O75095 1541 aa29.34■■■□□ 2.29
POLR2J3-202ENST00000443430 YBX3P16989 372 aaKnown RBP eCLIP29.31■■■□□ 2.28
POLR2J3-202ENST00000443430 COL23A1Q86Y22 540 aaPredicted RBP29.31■■■□□ 2.28
POLR2J3-202ENST00000443430 TESK2Q96S53 571 aa29.3■■■□□ 2.28
POLR2J3-202ENST00000443430 USP47Q96K76 1375 aa29.28■■■□□ 2.28
POLR2J3-202ENST00000443430 MSH5O43196 834 aa29.28■■■□□ 2.28
POLR2J3-202ENST00000443430 GRIN3BO60391 1043 aa29.28■■■□□ 2.28
POLR2J3-202ENST00000443430 NBPF6Q5VWK0 638 aa29.28■■■□□ 2.28
POLR2J3-202ENST00000443430 NBPF4Q96M43 638 aa29.28■■■□□ 2.28
POLR2J3-202ENST00000443430 MSL1Q68DK7 614 aa29.24■■■□□ 2.27
POLR2J3-202ENST00000443430 RTL1A6NKG5 1358 aa29.24■■■□□ 2.27
POLR2J3-202ENST00000443430 CGNL1Q0VF96 1302 aa29.23■■■□□ 2.27
POLR2J3-202ENST00000443430 ST20-MTHFSA0A0A6YYL1 179 aa29.23■■■□□ 2.27
POLR2J3-202ENST00000443430 RRS1Q15050 365 aaKnown RBP29.23■■■□□ 2.27
POLR2J3-202ENST00000443430 USHBP1Q8N6Y0 703 aa29.23■■■□□ 2.27
POLR2J3-202ENST00000443430 TONSLQ96HA7 1378 aa29.21■■■□□ 2.27
POLR2J3-202ENST00000443430 CEP350Q5VT06 3117 aa29.2■■■□□ 2.27
POLR2J3-202ENST00000443430 RAPGEF4Q8WZA2 1011 aa29.2■■■□□ 2.26
POLR2J3-202ENST00000443430 C5P01031 1676 aa29.2■■■□□ 2.26
POLR2J3-202ENST00000443430 FYB1O15117 783 aa29.19■■■□□ 2.26
POLR2J3-202ENST00000443430 TAF1LQ8IZX4 1826 aa29.18■■■□□ 2.26
POLR2J3-202ENST00000443430 TATP17735 454 aaPredicted RBP29.17■■■□□ 2.26
POLR2J3-202ENST00000443430 GGNBP2Q9H3C7 697 aa29.17■■■□□ 2.26
POLR2J3-202ENST00000443430 CD2APQ9Y5K6 639 aa29.17■■■□□ 2.26
POLR2J3-202ENST00000443430 SLC24A1O60721 1099 aa29.16■■■□□ 2.26
POLR2J3-202ENST00000443430 SMG6Q86US8 1419 aaKnown RBP29.15■■■□□ 2.26
POLR2J3-202ENST00000443430 ATP10DQ9P241 1426 aa29.15■■■□□ 2.26
POLR2J3-202ENST00000443430 FLAD1Q8NFF5 587 aa29.15■■■□□ 2.26
POLR2J3-202ENST00000443430 PALLDQ8WX93 1383 aa29.14■■■□□ 2.26
POLR2J3-202ENST00000443430 HSP90AB2PQ58FF8 381 aa29.14■■■□□ 2.26
POLR2J3-202ENST00000443430 PCDH11XQ9BZA7 1347 aa29.14■■■□□ 2.25
POLR2J3-202ENST00000443430 PCDH11YQ9BZA8 1340 aa29.14■■■□□ 2.25
POLR2J3-202ENST00000443430 HMGB2P26583 209 aaKnown RBP29.12■■■□□ 2.25
POLR2J3-202ENST00000443430 MPRIPQ6WCQ1 1025 aa29.12■■■□□ 2.25
POLR2J3-202ENST00000443430 INSRP06213 1382 aa29.12■■■□□ 2.25
POLR2J3-202ENST00000443430 CYP27B1O15528 508 aa29.11■■■□□ 2.25
POLR2J3-202ENST00000443430 IFFO2Q5TF58 517 aa29.11■■■□□ 2.25
POLR2J3-202ENST00000443430 ITGB4P16144 1822 aa29.1■■■□□ 2.25
POLR2J3-202ENST00000443430 C4BP0C0L5 1744 aa29.08■■■□□ 2.25
POLR2J3-202ENST00000443430 AMIGO3Q86WK7 504 aa29.08■■■□□ 2.25
POLR2J3-202ENST00000443430 TOGARAM1Q9Y4F4 1720 aa29.08■■■□□ 2.25
POLR2J3-202ENST00000443430 FLT4P35916 1363 aa29.07■■■□□ 2.24
POLR2J3-202ENST00000443430 ADCY9O60503 1353 aa29.06■■■□□ 2.24
POLR2J3-202ENST00000443430 SMARCC1Q92922 1105 aaPredicted RBP29.06■■■□□ 2.24
POLR2J3-202ENST00000443430 GPBP1L1Q9HC44 474 aaPredicted RBP29.06■■■□□ 2.24
POLR2J3-202ENST00000443430 AK7Q96M32 723 aa29.05■■■□□ 2.24
POLR2J3-202ENST00000443430 UBR3Q6ZT12 1888 aa29.05■■■□□ 2.24
POLR2J3-202ENST00000443430 KIF24Q5T7B8 1368 aa29.04■■■□□ 2.24
POLR2J3-202ENST00000443430 TMF1P82094 1093 aa29.04■■■□□ 2.24
POLR2J3-202ENST00000443430 SMIM5Q71RC9 77 aa29.04■■■□□ 2.24
POLR2J3-202ENST00000443430 KIF20BQ96Q89 1820 aa29.04■■■□□ 2.24
POLR2J3-202ENST00000443430 PIGBQ92521 554 aa29.02■■■□□ 2.24
POLR2J3-202ENST00000443430 PKD1L3Q7Z443 1732 aa29.01■■■□□ 2.23
POLR2J3-202ENST00000443430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.01■■■□□ 2.23
POLR2J3-202ENST00000443430 IGSF1Q8N6C5 1336 aa29■■■□□ 2.23
POLR2J3-202ENST00000443430 MAP2P11137 1827 aaKnown RBP29■■■□□ 2.23
POLR2J3-202ENST00000443430 PHF14O94880 888 aa29■■■□□ 2.23
POLR2J3-202ENST00000443430 ZNF526Q8TF50 670 aaPredicted RBP29■■■□□ 2.23
POLR2J3-202ENST00000443430 NKX1-1Q15270 411 aaPredicted RBP28.99■■■□□ 2.23
POLR2J3-202ENST00000443430 WWC3Q9ULE0 1092 aa28.98■■■□□ 2.23
POLR2J3-202ENST00000443430 EMILIN1Q9Y6C2 1016 aa28.98■■■□□ 2.23
POLR2J3-202ENST00000443430 NCAPD2Q15021 1401 aa28.97■■■□□ 2.23
POLR2J3-202ENST00000443430 NSD3Q9BZ95 1437 aa28.97■■■□□ 2.23
POLR2J3-202ENST00000443430 LOC102724428A0A0B4J2F2 783 aa28.96■■■□□ 2.23
POLR2J3-202ENST00000443430 HSPA6P17066 643 aa28.96■■■□□ 2.23
POLR2J3-202ENST00000443430 SSFA2P28290 1259 aa28.96■■■□□ 2.23
POLR2J3-202ENST00000443430 SIK1P57059 783 aa28.96■■■□□ 2.23
POLR2J3-202ENST00000443430 LINC00116Q8NCU8 138 aa28.96■■■□□ 2.23
POLR2J3-202ENST00000443430 CARD14Q9BXL6 1004 aa28.95■■■□□ 2.22
POLR2J3-202ENST00000443430 SPG7Q9UQ90 795 aa28.93■■■□□ 2.22
POLR2J3-202ENST00000443430 CDCA8Q53HL2 280 aa28.91■■■□□ 2.22
POLR2J3-202ENST00000443430 ITPK1Q13572 414 aa28.9■■■□□ 2.22
POLR2J3-202ENST00000443430 ASAP1Q9ULH1 1129 aa28.9■■■□□ 2.22
POLR2J3-202ENST00000443430 PPM1GO15355 546 aaPredicted RBP28.89■■■□□ 2.22
POLR2J3-202ENST00000443430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.89■■■□□ 2.22
POLR2J3-202ENST00000443430 TMOD3Q9NYL9 352 aa28.89■■■□□ 2.22
POLR2J3-202ENST00000443430 GNPATO15228 680 aa28.88■■■□□ 2.21
POLR2J3-202ENST00000443430 EYA1Q99502 592 aa28.88■■■□□ 2.21
POLR2J3-202ENST00000443430 WASHC2AQ641Q2 1341 aa28.88■■■□□ 2.21
POLR2J3-202ENST00000443430 ANKRD26Q9UPS8 1709 aa28.87■■■□□ 2.21
POLR2J3-202ENST00000443430 KIF3CO14782 793 aa28.87■■■□□ 2.21
POLR2J3-202ENST00000443430 ATP6V1AP38606 617 aa28.87■■■□□ 2.21
POLR2J3-202ENST00000443430 CICQ96RK0 1608 aaPredicted RBP28.85■■■□□ 2.21
POLR2J3-202ENST00000443430 MMP10P09238 476 aa28.84■■■□□ 2.21
POLR2J3-202ENST00000443430 PHKG2P15735 406 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms