RNA–Protein interactions for RNA: ENST00000442929.1

FAM3A-214, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-214ENST00000442929 SHANK3Q9BYB0 1731 aa25.56■■□□□ 1.68
FAM3A-214ENST00000442929 ANP32CO43423 234 aa25.55■■□□□ 1.68
FAM3A-214ENST00000442929 KDRP35968 1356 aa25.52■■□□□ 1.68
FAM3A-214ENST00000442929 SBF2Q86WG5 1849 aa25.51■■□□□ 1.67
FAM3A-214ENST00000442929 U2SURPO15042 1029 aaKnown RBP25.5■■□□□ 1.67
FAM3A-214ENST00000442929 FAM196AQ6ZSG2 479 aa25.5■■□□□ 1.67
FAM3A-214ENST00000442929 ZCRB1Q8TBF4 217 aaKnown RBP25.5■■□□□ 1.67
FAM3A-214ENST00000442929 PCDH11XQ9BZA7 1347 aa25.49■■□□□ 1.67
FAM3A-214ENST00000442929 PCDH11YQ9BZA8 1340 aa25.49■■□□□ 1.67
FAM3A-214ENST00000442929 SPG7Q9UQ90 795 aa25.49■■□□□ 1.67
FAM3A-214ENST00000442929 SULT6B1Q6IMI4 303 aa25.48■■□□□ 1.67
FAM3A-214ENST00000442929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.48■■□□□ 1.67
FAM3A-214ENST00000442929 BCL9O00512 1426 aa25.46■■□□□ 1.67
FAM3A-214ENST00000442929 NHSQ6T4R5 1651 aa25.45■■□□□ 1.66
FAM3A-214ENST00000442929 EP400Q96L91 3159 aa25.44■■□□□ 1.66
FAM3A-214ENST00000442929 DOT1LQ8TEK3 1739 aa25.44■■□□□ 1.66
FAM3A-214ENST00000442929 AMOTQ4VCS5 1084 aa25.44■■□□□ 1.66
FAM3A-214ENST00000442929 CCDC125Q86Z20 511 aa25.44■■□□□ 1.66
FAM3A-214ENST00000442929 TNS1Q9HBL0 1735 aaKnown RBP25.43■■□□□ 1.66
FAM3A-214ENST00000442929 PLEKHO1Q53GL0 409 aaPredicted RBP25.43■■□□□ 1.66
FAM3A-214ENST00000442929 SF3B2Q13435 895 aaKnown RBP25.42■■□□□ 1.66
FAM3A-214ENST00000442929 AEBP1Q8IUX7 1158 aa25.42■■□□□ 1.66
FAM3A-214ENST00000442929 MARCH10Q8NA82 808 aaPredicted RBP25.42■■□□□ 1.66
FAM3A-214ENST00000442929 DDX54Q8TDD1 881 aaKnown RBP25.42■■□□□ 1.66
FAM3A-214ENST00000442929 KAT6BQ8WYB5 2073 aa25.41■■□□□ 1.66
FAM3A-214ENST00000442929 HMOX1P09601 288 aa25.41■■□□□ 1.66
FAM3A-214ENST00000442929 U2AF1L5P0DN76 240 aaPredicted RBP25.41■■□□□ 1.66
FAM3A-214ENST00000442929 U2AF1Q01081 240 aaKnown RBP eCLIP25.41■■□□□ 1.66
FAM3A-214ENST00000442929 PNNQ9H307 717 aaKnown RBP25.41■■□□□ 1.66
FAM3A-214ENST00000442929 NEFMP07197 916 aa25.4■■□□□ 1.66
FAM3A-214ENST00000442929 VIRMAQ69YN4 1812 aaKnown RBP25.4■■□□□ 1.66
FAM3A-214ENST00000442929 FAM182BQ5T319 152 aa25.39■■□□□ 1.66
FAM3A-214ENST00000442929 RGPD3A6NKT7 1758 aaPredicted RBP25.37■■□□□ 1.65
FAM3A-214ENST00000442929 RGPD4Q7Z3J3 1758 aa25.37■■□□□ 1.65
FAM3A-214ENST00000442929 FCHSD2O94868 740 aa25.37■■□□□ 1.65
FAM3A-214ENST00000442929 WDR43Q15061 677 aaKnown RBP eCLIP25.37■■□□□ 1.65
FAM3A-214ENST00000442929 IFNL2Q8IZJ0 200 aa25.37■■□□□ 1.65
FAM3A-214ENST00000442929 HSP90AB1P08238 724 aaKnown RBP25.36■■□□□ 1.65
FAM3A-214ENST00000442929 C1orf141Q5JVX7 400 aa25.36■■□□□ 1.65
FAM3A-214ENST00000442929 ITGB4P16144 1822 aa25.35■■□□□ 1.65
FAM3A-214ENST00000442929 ZNF530Q6P9A1 599 aaPredicted RBP25.34■■□□□ 1.65
FAM3A-214ENST00000442929 RSPH6AQ9H0K4 717 aa25.34■■□□□ 1.65
FAM3A-214ENST00000442929 SCN11AQ9UI33 1791 aa25.33■■□□□ 1.65
FAM3A-214ENST00000442929 BTAF1O14981 1849 aa25.33■■□□□ 1.65
FAM3A-214ENST00000442929 TOGARAM1Q9Y4F4 1720 aa25.33■■□□□ 1.65
FAM3A-214ENST00000442929 CYP27B1O15528 508 aa25.32■■□□□ 1.64
FAM3A-214ENST00000442929 PRKAR2BP31323 418 aa25.32■■□□□ 1.64
FAM3A-214ENST00000442929 GAS2L2Q8NHY3 880 aa25.32■■□□□ 1.64
FAM3A-214ENST00000442929 TRIM37O94972 964 aa25.31■■□□□ 1.64
FAM3A-214ENST00000442929 PHKG2P15735 406 aa25.31■■□□□ 1.64
FAM3A-214ENST00000442929 BAG6P46379 1132 aa25.3■■□□□ 1.64
FAM3A-214ENST00000442929 NKX1-1Q15270 411 aaPredicted RBP25.3■■□□□ 1.64
FAM3A-214ENST00000442929 BCL11BQ9C0K0 894 aaPredicted RBP25.3■■□□□ 1.64
FAM3A-214ENST00000442929 MAPK8IP3Q9UPT6 1336 aa25.3■■□□□ 1.64
FAM3A-214ENST00000442929 AKAP4Q5JQC9 854 aa25.28■■□□□ 1.64
FAM3A-214ENST00000442929 DIEXFQ68CQ4 756 aaKnown RBP25.28■■□□□ 1.64
FAM3A-214ENST00000442929 DCAF5Q96JK2 942 aa25.28■■□□□ 1.64
FAM3A-214ENST00000442929 DLG5Q8TDM6 1919 aa25.27■■□□□ 1.64
FAM3A-214ENST00000442929 MRS2Q9HD23 443 aa25.27■■□□□ 1.64
FAM3A-214ENST00000442929 ACSBG1Q96GR2 724 aa25.26■■□□□ 1.63
FAM3A-214ENST00000442929 ADAMTS7Q9UKP4 1686 aa25.26■■□□□ 1.63
FAM3A-214ENST00000442929 SYTL4Q96C24 671 aaPredicted RBP25.25■■□□□ 1.63
FAM3A-214ENST00000442929 MAP3K5Q99683 1374 aa25.24■■□□□ 1.63
FAM3A-214ENST00000442929 APBA3O96018 575 aa25.24■■□□□ 1.63
FAM3A-214ENST00000442929 MTHFSDQ2M296 383 aaKnown RBP25.24■■□□□ 1.63
FAM3A-214ENST00000442929 RREB1Q92766 1687 aa25.23■■□□□ 1.63
FAM3A-214ENST00000442929 GNAT3A8MTJ3 354 aa25.21■■□□□ 1.63
FAM3A-214ENST00000442929 ERVV-2B6SEH9 535 aa25.21■■□□□ 1.63
FAM3A-214ENST00000442929 PRIM1P49642 420 aaKnown RBP25.21■■□□□ 1.63
FAM3A-214ENST00000442929 KDM6AO15550 1401 aaPredicted RBP25.2■■□□□ 1.63
FAM3A-214ENST00000442929 TMOD3Q9NYL9 352 aa25.2■■□□□ 1.62
FAM3A-214ENST00000442929 LY75O60449 1722 aa25.2■■□□□ 1.62
FAM3A-214ENST00000442929 KCNQ2O43526 872 aa25.19■■□□□ 1.62
FAM3A-214ENST00000442929 PHACTR3Q96KR7 559 aa25.19■■□□□ 1.62
FAM3A-214ENST00000442929 MRC1P22897 1456 aa25.19■■□□□ 1.62
FAM3A-214ENST00000442929 PLSCR1O15162 318 aa25.18■■□□□ 1.62
FAM3A-214ENST00000442929 RTF1Q92541 710 aaKnown RBP25.18■■□□□ 1.62
FAM3A-214ENST00000442929 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
FAM3A-214ENST00000442929 PLEKHF1Q96S99 279 aa25.18■■□□□ 1.62
FAM3A-214ENST00000442929 MPRIPQ6WCQ1 1025 aa25.17■■□□□ 1.62
FAM3A-214ENST00000442929 ADAMTS8Q9UP79 889 aa25.17■■□□□ 1.62
FAM3A-214ENST00000442929 SIPA1L3O60292 1781 aaPredicted RBP25.17■■□□□ 1.62
FAM3A-214ENST00000442929 CABP4P57796 275 aa25.16■■□□□ 1.62
FAM3A-214ENST00000442929 NUP188Q5SRE5 1749 aa25.15■■□□□ 1.62
FAM3A-214ENST00000442929 CCER2I3L3R5 266 aa25.15■■□□□ 1.62
FAM3A-214ENST00000442929 HTATSF1O43719 755 aaKnown RBP25.15■■□□□ 1.62
FAM3A-214ENST00000442929 HMGB2P26583 209 aaKnown RBP25.15■■□□□ 1.62
FAM3A-214ENST00000442929 NFE2L2Q16236 605 aa25.15■■□□□ 1.62
FAM3A-214ENST00000442929 SMARCC1Q92922 1105 aaPredicted RBP25.15■■□□□ 1.62
FAM3A-214ENST00000442929 LMOD3Q0VAK6 560 aa25.14■■□□□ 1.62
FAM3A-214ENST00000442929 PAPPAQ13219 1627 aa25.13■■□□□ 1.61
FAM3A-214ENST00000442929 RNMTO43148 476 aaKnown RBP25.13■■□□□ 1.61
FAM3A-214ENST00000442929 DEFB132Q7Z7B7 95 aa25.13■■□□□ 1.61
FAM3A-214ENST00000442929 PNISRQ8TF01 805 aaKnown RBP25.13■■□□□ 1.61
FAM3A-214ENST00000442929 EN1Q05925 392 aaPredicted RBP25.12■■□□□ 1.61
FAM3A-214ENST00000442929 TEFQ10587 303 aa25.12■■□□□ 1.61
FAM3A-214ENST00000442929 CCDC184Q52MB2 194 aa25.12■■□□□ 1.61
FAM3A-214ENST00000442929 ZNF831Q5JPB2 1677 aa25.11■■□□□ 1.61
FAM3A-214ENST00000442929 CCDC146Q8IYE0 955 aa25.11■■□□□ 1.61
FAM3A-214ENST00000442929 PTF1AQ7RTS3 328 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms