RNA–Protein interactions for RNA: ENST00000442667.2

CDCA4P1-201, Transcript of cell division cycle associated 4 pseudogene 1, humanhuman

BASIC

Gene CDCA4P1, Length 624 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P1-201ENST00000442667 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
CDCA4P1-201ENST00000442667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDCA4P1-201ENST00000442667 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
CDCA4P1-201ENST00000442667 OVOS2A0A0G2JMS6 1433 aa13.58□□□□□ -0.24
CDCA4P1-201ENST00000442667 PRKAR2BP31323 418 aa13.58□□□□□ -0.24
CDCA4P1-201ENST00000442667 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDCA4P1-201ENST00000442667 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
CDCA4P1-201ENST00000442667 ILDR2Q71H61 639 aa13.58□□□□□ -0.24
CDCA4P1-201ENST00000442667 KRT27Q7Z3Y8 459 aa13.58□□□□□ -0.24
CDCA4P1-201ENST00000442667 MARCH10Q8NA82 808 aaPredicted RBP13.57□□□□□ -0.24
CDCA4P1-201ENST00000442667 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
CDCA4P1-201ENST00000442667 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
CDCA4P1-201ENST00000442667 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
CDCA4P1-201ENST00000442667 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
CDCA4P1-201ENST00000442667 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
CDCA4P1-201ENST00000442667 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
CDCA4P1-201ENST00000442667 CYP27B1O15528 508 aa13.55□□□□□ -0.24
CDCA4P1-201ENST00000442667 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
CDCA4P1-201ENST00000442667 PLEKHG2Q9H7P9 1386 aa13.55□□□□□ -0.24
CDCA4P1-201ENST00000442667 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
CDCA4P1-201ENST00000442667 ZNF530Q6P9A1 599 aaPredicted RBP13.54□□□□□ -0.24
CDCA4P1-201ENST00000442667 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
CDCA4P1-201ENST00000442667 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
CDCA4P1-201ENST00000442667 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
CDCA4P1-201ENST00000442667 RGPD1P0DJD0 1748 aa13.53□□□□□ -0.24
CDCA4P1-201ENST00000442667 PHKG2P15735 406 aa13.53□□□□□ -0.24
CDCA4P1-201ENST00000442667 CCDC146Q8IYE0 955 aa13.53□□□□□ -0.24
CDCA4P1-201ENST00000442667 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
CDCA4P1-201ENST00000442667 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
CDCA4P1-201ENST00000442667 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
CDCA4P1-201ENST00000442667 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.25
CDCA4P1-201ENST00000442667 GAS2L2Q8NHY3 880 aa13.52□□□□□ -0.25
CDCA4P1-201ENST00000442667 RGPD2P0DJD1 1756 aa13.52□□□□□ -0.25
CDCA4P1-201ENST00000442667 NEFMP07197 916 aa13.51□□□□□ -0.25
CDCA4P1-201ENST00000442667 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
CDCA4P1-201ENST00000442667 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
CDCA4P1-201ENST00000442667 RUNDC1Q96C34 613 aa13.51□□□□□ -0.25
CDCA4P1-201ENST00000442667 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
CDCA4P1-201ENST00000442667 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
CDCA4P1-201ENST00000442667 C1orf141Q5JVX7 400 aa13.5□□□□□ -0.25
CDCA4P1-201ENST00000442667 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
CDCA4P1-201ENST00000442667 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
CDCA4P1-201ENST00000442667 TMPOP42166 694 aaKnown RBP13.48□□□□□ -0.25
CDCA4P1-201ENST00000442667 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
CDCA4P1-201ENST00000442667 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
CDCA4P1-201ENST00000442667 BCL9O00512 1426 aa13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 LRRC37A3O60309 1634 aa13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 APAF1O14727 1248 aa13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 KCNQ2O43526 872 aa13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 PRIM1P49642 420 aaKnown RBP13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 DCAF5Q96JK2 942 aa13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 RRP7AQ9Y3A4 280 aaKnown RBP13.47□□□□□ -0.25
CDCA4P1-201ENST00000442667 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
CDCA4P1-201ENST00000442667 TRIM37O94972 964 aa13.46□□□□□ -0.25
CDCA4P1-201ENST00000442667 RIPK4P57078 832 aa13.46□□□□□ -0.25
CDCA4P1-201ENST00000442667 IL17REQ8NFR9 667 aa13.46□□□□□ -0.25
CDCA4P1-201ENST00000442667 ERVV-2B6SEH9 535 aa13.45□□□□□ -0.26
CDCA4P1-201ENST00000442667 HTATSF1O43719 755 aaKnown RBP13.45□□□□□ -0.26
CDCA4P1-201ENST00000442667 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
CDCA4P1-201ENST00000442667 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
CDCA4P1-201ENST00000442667 DCTN1Q14203 1278 aa13.44□□□□□ -0.26
CDCA4P1-201ENST00000442667 NEUROD2Q15784 382 aa13.44□□□□□ -0.26
CDCA4P1-201ENST00000442667 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
CDCA4P1-201ENST00000442667 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
CDCA4P1-201ENST00000442667 SENP3-EIF4A1A0A087X0R7 540 aa13.43□□□□□ -0.26
CDCA4P1-201ENST00000442667 MCM10Q7L590 875 aa13.43□□□□□ -0.26
CDCA4P1-201ENST00000442667 RTF1Q92541 710 aaKnown RBP13.43□□□□□ -0.26
CDCA4P1-201ENST00000442667 UPF1Q92900 1129 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDCA4P1-201ENST00000442667 WNK3Q9BYP7 1800 aa13.42□□□□□ -0.26
CDCA4P1-201ENST00000442667 CABP4P57796 275 aa13.42□□□□□ -0.26
CDCA4P1-201ENST00000442667 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
CDCA4P1-201ENST00000442667 PIGBQ92521 554 aa13.42□□□□□ -0.26
CDCA4P1-201ENST00000442667 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
CDCA4P1-201ENST00000442667 PKD1L3Q7Z443 1732 aa13.42□□□□□ -0.26
CDCA4P1-201ENST00000442667 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
CDCA4P1-201ENST00000442667 SLC52A2Q9HAB3 445 aa13.41□□□□□ -0.26
CDCA4P1-201ENST00000442667 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
CDCA4P1-201ENST00000442667 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
CDCA4P1-201ENST00000442667 APBA3O96018 575 aa13.4□□□□□ -0.26
CDCA4P1-201ENST00000442667 LMOD3Q0VAK6 560 aa13.4□□□□□ -0.26
CDCA4P1-201ENST00000442667 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
CDCA4P1-201ENST00000442667 CCDC125Q86Z20 511 aa13.4□□□□□ -0.26
CDCA4P1-201ENST00000442667 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
CDCA4P1-201ENST00000442667 TEFQ10587 303 aa13.39□□□□□ -0.27
CDCA4P1-201ENST00000442667 SALL2Q9Y467 1007 aaPredicted RBP13.39□□□□□ -0.27
CDCA4P1-201ENST00000442667 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
CDCA4P1-201ENST00000442667 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
CDCA4P1-201ENST00000442667 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
CDCA4P1-201ENST00000442667 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
CDCA4P1-201ENST00000442667 EP400Q96L91 3159 aa13.38□□□□□ -0.27
CDCA4P1-201ENST00000442667 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
CDCA4P1-201ENST00000442667 DEFB132Q7Z7B7 95 aa13.37□□□□□ -0.27
CDCA4P1-201ENST00000442667 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
CDCA4P1-201ENST00000442667 PLSCR1O15162 318 aa13.36□□□□□ -0.27
CDCA4P1-201ENST00000442667 SLC39A6Q13433 755 aa13.36□□□□□ -0.27
CDCA4P1-201ENST00000442667 WWC1Q8IX03 1113 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms