RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 DOT1LQ8TEK3 1739 aa11.75□□□□□ -0.53
TOP3B-209ENST00000442653 KCNQ4P56696 695 aa11.75□□□□□ -0.53
TOP3B-209ENST00000442653 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
TOP3B-209ENST00000442653 ARXQ96QS3 562 aa11.75□□□□□ -0.53
TOP3B-209ENST00000442653 NSD2O96028 1365 aa11.75□□□□□ -0.53
TOP3B-209ENST00000442653 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
TOP3B-209ENST00000442653 AMPHP49418 695 aa11.74□□□□□ -0.53
TOP3B-209ENST00000442653 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
TOP3B-209ENST00000442653 RRS1Q15050 365 aaKnown RBP11.74□□□□□ -0.53
TOP3B-209ENST00000442653 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-209ENST00000442653 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
TOP3B-209ENST00000442653 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
TOP3B-209ENST00000442653 PNPLA7Q6ZV29 1317 aa11.73□□□□□ -0.53
TOP3B-209ENST00000442653 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
TOP3B-209ENST00000442653 TUBGCP6Q96RT7 1819 aa11.73□□□□□ -0.53
TOP3B-209ENST00000442653 MAP3K5Q99683 1374 aa11.73□□□□□ -0.53
TOP3B-209ENST00000442653 GGNBP2Q9H3C7 697 aa11.73□□□□□ -0.53
TOP3B-209ENST00000442653 QSER1Q2KHR3 1735 aa11.72□□□□□ -0.53
TOP3B-209ENST00000442653 RTL1A6NKG5 1358 aa11.72□□□□□ -0.53
TOP3B-209ENST00000442653 USP47Q96K76 1375 aa11.72□□□□□ -0.53
TOP3B-209ENST00000442653 FYB1O15117 783 aa11.72□□□□□ -0.53
TOP3B-209ENST00000442653 USHBP1Q8N6Y0 703 aa11.72□□□□□ -0.53
TOP3B-209ENST00000442653 ZNF784Q8NCA9 323 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-209ENST00000442653 ZCRB1Q8TBF4 217 aaKnown RBP11.72□□□□□ -0.53
TOP3B-209ENST00000442653 LY75O60449 1722 aa11.72□□□□□ -0.53
TOP3B-209ENST00000442653 COL24A1Q17RW2 1714 aa11.71□□□□□ -0.54
TOP3B-209ENST00000442653 CEP350Q5VT06 3117 aa11.7□□□□□ -0.54
TOP3B-209ENST00000442653 TFCP2L1Q9NZI6 479 aa11.7□□□□□ -0.54
TOP3B-209ENST00000442653 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
TOP3B-209ENST00000442653 TMF1P82094 1093 aa11.69□□□□□ -0.54
TOP3B-209ENST00000442653 HSP90AB2PQ58FF8 381 aa11.69□□□□□ -0.54
TOP3B-209ENST00000442653 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
TOP3B-209ENST00000442653 CCNL1Q9UK58 526 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-209ENST00000442653 CHD4Q14839 1912 aa11.68□□□□□ -0.54
TOP3B-209ENST00000442653 KIF20BQ96Q89 1820 aa11.68□□□□□ -0.54
TOP3B-209ENST00000442653 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
TOP3B-209ENST00000442653 INSRP06213 1382 aa11.67□□□□□ -0.54
TOP3B-209ENST00000442653 CGNL1Q0VF96 1302 aa11.67□□□□□ -0.54
TOP3B-209ENST00000442653 POLD1P28340 1107 aa11.67□□□□□ -0.54
TOP3B-209ENST00000442653 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
TOP3B-209ENST00000442653 RAPGEF4Q8WZA2 1011 aa11.67□□□□□ -0.54
TOP3B-209ENST00000442653 CARD14Q9BXL6 1004 aa11.67□□□□□ -0.54
TOP3B-209ENST00000442653 SMG6Q86US8 1419 aaKnown RBP11.67□□□□□ -0.54
TOP3B-209ENST00000442653 FLT4P35916 1363 aa11.67□□□□□ -0.54
TOP3B-209ENST00000442653 GPR162Q16538 588 aa11.66□□□□□ -0.54
TOP3B-209ENST00000442653 NLGN2Q8NFZ4 835 aa11.66□□□□□ -0.54
TOP3B-209ENST00000442653 CYP27B1O15528 508 aa11.65□□□□□ -0.54
TOP3B-209ENST00000442653 COL23A1Q86Y22 540 aaPredicted RBP11.65□□□□□ -0.54
TOP3B-209ENST00000442653 EMILIN1Q9Y6C2 1016 aa11.65□□□□□ -0.54
TOP3B-209ENST00000442653 TOGARAM1Q9Y4F4 1720 aa11.65□□□□□ -0.54
TOP3B-209ENST00000442653 KIF24Q5T7B8 1368 aa11.65□□□□□ -0.55
TOP3B-209ENST00000442653 C5P01031 1676 aa11.65□□□□□ -0.55
TOP3B-209ENST00000442653 PCDH11XQ9BZA7 1347 aa11.64□□□□□ -0.55
TOP3B-209ENST00000442653 PCDH11YQ9BZA8 1340 aa11.64□□□□□ -0.55
TOP3B-209ENST00000442653 NSD3Q9BZ95 1437 aa11.64□□□□□ -0.55
TOP3B-209ENST00000442653 TATP17735 454 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-209ENST00000442653 PALLDQ8WX93 1383 aa11.64□□□□□ -0.55
TOP3B-209ENST00000442653 NCAPD2Q15021 1401 aa11.63□□□□□ -0.55
TOP3B-209ENST00000442653 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
TOP3B-209ENST00000442653 MSL1Q68DK7 614 aa11.63□□□□□ -0.55
TOP3B-209ENST00000442653 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
TOP3B-209ENST00000442653 PELP1Q8IZL8 1130 aaKnown RBP11.63□□□□□ -0.55
TOP3B-209ENST00000442653 PKD1L3Q7Z443 1732 aa11.63□□□□□ -0.55
TOP3B-209ENST00000442653 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
TOP3B-209ENST00000442653 YBX3P16989 372 aaKnown RBP eCLIP11.62□□□□□ -0.55
TOP3B-209ENST00000442653 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
TOP3B-209ENST00000442653 AMIGO3Q86WK7 504 aa11.62□□□□□ -0.55
TOP3B-209ENST00000442653 TAF1LQ8IZX4 1826 aa11.62□□□□□ -0.55
TOP3B-209ENST00000442653 ITGB4P16144 1822 aa11.61□□□□□ -0.55
TOP3B-209ENST00000442653 PPM1GO15355 546 aaPredicted RBP11.6□□□□□ -0.55
TOP3B-209ENST00000442653 PIGBQ92521 554 aa11.6□□□□□ -0.55
TOP3B-209ENST00000442653 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
TOP3B-209ENST00000442653 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
TOP3B-209ENST00000442653 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
TOP3B-209ENST00000442653 WASHC2AQ641Q2 1341 aa11.59□□□□□ -0.55
TOP3B-209ENST00000442653 MAP2P11137 1827 aaKnown RBP11.58□□□□□ -0.56
TOP3B-209ENST00000442653 UBR3Q6ZT12 1888 aa11.58□□□□□ -0.56
TOP3B-209ENST00000442653 NKX1-1Q15270 411 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-209ENST00000442653 EYA1Q99502 592 aa11.58□□□□□ -0.56
TOP3B-209ENST00000442653 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
TOP3B-209ENST00000442653 SMARCC1Q92922 1105 aaPredicted RBP11.57□□□□□ -0.56
TOP3B-209ENST00000442653 POLKQ9UBT6 870 aa11.57□□□□□ -0.56
TOP3B-209ENST00000442653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.56□□□□□ -0.56
TOP3B-209ENST00000442653 LOC102724428A0A0B4J2F2 783 aa11.56□□□□□ -0.56
TOP3B-209ENST00000442653 PHF14O94880 888 aa11.56□□□□□ -0.56
TOP3B-209ENST00000442653 SIK1P57059 783 aa11.56□□□□□ -0.56
TOP3B-209ENST00000442653 LINC00116Q8NCU8 138 aa11.56□□□□□ -0.56
TOP3B-209ENST00000442653 FLAD1Q8NFF5 587 aa11.56□□□□□ -0.56
TOP3B-209ENST00000442653 AK7Q96M32 723 aa11.56□□□□□ -0.56
TOP3B-209ENST00000442653 SPG7Q9UQ90 795 aa11.56□□□□□ -0.56
TOP3B-209ENST00000442653 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
TOP3B-209ENST00000442653 GRIN3BO60391 1043 aa11.55□□□□□ -0.56
TOP3B-209ENST00000442653 GIGYF1O75420 1035 aaPredicted RBP11.55□□□□□ -0.56
TOP3B-209ENST00000442653 TNNT2P45379 298 aaPredicted RBP11.55□□□□□ -0.56
TOP3B-209ENST00000442653 ITPK1Q13572 414 aa11.55□□□□□ -0.56
TOP3B-209ENST00000442653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.566e-7■■□□□ 11.4
TOP3B-209ENST00000442653 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
TOP3B-209ENST00000442653 PHKG2P15735 406 aa11.54□□□□□ -0.56
TOP3B-209ENST00000442653 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
TOP3B-209ENST00000442653 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms