RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 MAP3K13O43283 966 aa10.11□□□□□ -0.79
RFX3-206ENST00000442560 NME9Q86XW9 330 aa10.11□□□□□ -0.79
RFX3-206ENST00000442560 PROM2Q8N271 834 aa10.11□□□□□ -0.79
RFX3-206ENST00000442560 CARD11Q9BXL7 1154 aa10.11□□□□□ -0.79
RFX3-206ENST00000442560 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
RFX3-206ENST00000442560 PIK3C2AO00443 1686 aa10.1□□□□□ -0.79
RFX3-206ENST00000442560 SLC12A5Q9H2X9 1139 aa10.1□□□□□ -0.79
RFX3-206ENST00000442560 TRPM1Q7Z4N2 1603 aa10.1□□□□□ -0.79
RFX3-206ENST00000442560 PARP4Q9UKK3 1724 aaKnown RBP10.1□□□□□ -0.79
RFX3-206ENST00000442560 TXNRD1Q16881 649 aa10.09□□□□□ -0.79
RFX3-206ENST00000442560 HDGFL2Q7Z4V5 671 aaPredicted RBP10.09□□□□□ -0.79
RFX3-206ENST00000442560 ACSBG1Q96GR2 724 aa10.09□□□□□ -0.79
RFX3-206ENST00000442560 PDGFDQ9GZP0 370 aaPredicted RBP10.09□□□□□ -0.79
RFX3-206ENST00000442560 NLRP2Q9NX02 1062 aa10.09□□□□□ -0.79
RFX3-206ENST00000442560 USP31Q70CQ4 1352 aa10.09□□□□□ -0.79
RFX3-206ENST00000442560 CCDC7Q96M83 1385 aa10.09□□□□□ -0.79
RFX3-206ENST00000442560 RREB1Q92766 1687 aa10.09□□□□□ -0.79
RFX3-206ENST00000442560 COL18A1P39060 1754 aa10.09□□□□□ -0.79
RFX3-206ENST00000442560 NUP188Q5SRE5 1749 aa10.08□□□□□ -0.8
RFX3-206ENST00000442560 BCL9O00512 1426 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 LRRC37A3O60309 1634 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 PEAK1Q9H792 1746 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 SBNO2Q9Y2G9 1366 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 ZBTB7AO95365 584 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 MIER1Q8N108 512 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 ANKRD24Q8TF21 1146 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 STK32BQ9NY57 414 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 COLQQ9Y215 455 aaPredicted RBP10.07□□□□□ -0.8
RFX3-206ENST00000442560 NFAT5O94916 1531 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 ERBB3P21860 1342 aa10.07□□□□□ -0.8
RFX3-206ENST00000442560 CD163L1Q9NR16 1453 aa10.06□□□□□ -0.8
RFX3-206ENST00000442560 IL2RBP14784 551 aa10.06□□□□□ -0.8
RFX3-206ENST00000442560 YY1P25490 414 aa10.06□□□□□ -0.8
RFX3-206ENST00000442560 SLC15A2Q16348 729 aa10.06□□□□□ -0.8
RFX3-206ENST00000442560 TONSLQ96HA7 1378 aa10.05□□□□□ -0.8
RFX3-206ENST00000442560 SEC24BO95487 1268 aa10.05□□□□□ -0.8
RFX3-206ENST00000442560 TERF2IPQ9NYB0 399 aa10.05□□□□□ -0.8
RFX3-206ENST00000442560 TNS2Q63HR2 1409 aa10.05□□□□□ -0.8
RFX3-206ENST00000442560 NINLQ9Y2I6 1382 aa10.04□□□□□ -0.8
RFX3-206ENST00000442560 LTV1Q96GA3 475 aaPredicted RBP10.04□□□□□ -0.8
RFX3-206ENST00000442560 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
RFX3-206ENST00000442560 A0A1W2PP64 1363 aa10.03□□□□□ -0.8
RFX3-206ENST00000442560 PTGER2P43116 358 aa10.03□□□□□ -0.8
RFX3-206ENST00000442560 EDC4Q6P2E9 1401 aaKnown RBP10.03□□□□□ -0.8
RFX3-206ENST00000442560 IP6K1Q92551 441 aa10.03□□□□□ -0.8
RFX3-206ENST00000442560 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
RFX3-206ENST00000442560 AKAP12Q02952 1782 aa10.03□□□□□ -0.8
RFX3-206ENST00000442560 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
RFX3-206ENST00000442560 FBLN1P23142 703 aa10.02□□□□□ -0.81
RFX3-206ENST00000442560 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.81
RFX3-206ENST00000442560 ABCC6O95255 1503 aa10.02□□□□□ -0.81
RFX3-206ENST00000442560 TTLL13PA6NNM8 815 aa10.01□□□□□ -0.81
RFX3-206ENST00000442560 COG3Q96JB2 828 aa10.01□□□□□ -0.81
RFX3-206ENST00000442560 TESK2Q96S53 571 aa10.01□□□□□ -0.81
RFX3-206ENST00000442560 MTFR1LQ9H019 292 aa10.01□□□□□ -0.81
RFX3-206ENST00000442560 MON2Q7Z3U7 1717 aa10□□□□□ -0.81
RFX3-206ENST00000442560 AMPHP49418 695 aa10□□□□□ -0.81
RFX3-206ENST00000442560 ZNF827Q17R98 1081 aa10□□□□□ -0.81
RFX3-206ENST00000442560 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
RFX3-206ENST00000442560 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
RFX3-206ENST00000442560 RGPD5Q99666 1765 aa10□□□□□ -0.81
RFX3-206ENST00000442560 MAP3K19Q56UN5 1328 aa10□□□□□ -0.81
RFX3-206ENST00000442560 RGPD3A6NKT7 1758 aaPredicted RBP9.99□□□□□ -0.81
RFX3-206ENST00000442560 RGPD4Q7Z3J3 1758 aa9.99□□□□□ -0.81
RFX3-206ENST00000442560 SBF2Q86WG5 1849 aa9.99□□□□□ -0.81
RFX3-206ENST00000442560 WNK3Q9BYP7 1800 aa9.99□□□□□ -0.81
RFX3-206ENST00000442560 HOXC9P31274 260 aa9.99□□□□□ -0.81
RFX3-206ENST00000442560 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
RFX3-206ENST00000442560 SYT17Q9BSW7 474 aa9.99□□□□□ -0.81
RFX3-206ENST00000442560 TIE1P35590 1138 aa9.98□□□□□ -0.81
RFX3-206ENST00000442560 SYTL4Q96C24 671 aaPredicted RBP9.98□□□□□ -0.81
RFX3-206ENST00000442560 ARXQ96QS3 562 aa9.98□□□□□ -0.81
RFX3-206ENST00000442560 CASZ1Q86V15 1759 aa9.98□□□□□ -0.81
RFX3-206ENST00000442560 SLC24A1O60721 1099 aa9.97□□□□□ -0.81
RFX3-206ENST00000442560 PRIM1P49642 420 aaKnown RBP9.97□□□□□ -0.81
RFX3-206ENST00000442560 KCNQ4P56696 695 aa9.97□□□□□ -0.81
RFX3-206ENST00000442560 RRS1Q15050 365 aaKnown RBP9.97□□□□□ -0.81
RFX3-206ENST00000442560 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
RFX3-206ENST00000442560 TRIM35Q9UPQ4 493 aa9.97□□□□□ -0.81
RFX3-206ENST00000442560 FYB1O15117 783 aa9.96□□□□□ -0.82
RFX3-206ENST00000442560 TMF1P82094 1093 aa9.96□□□□□ -0.82
RFX3-206ENST00000442560 USHBP1Q8N6Y0 703 aa9.96□□□□□ -0.82
RFX3-206ENST00000442560 ZCRB1Q8TBF4 217 aaKnown RBP9.96□□□□□ -0.82
RFX3-206ENST00000442560 NHSQ6T4R5 1651 aa9.96□□□□□ -0.82
RFX3-206ENST00000442560 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
RFX3-206ENST00000442560 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
RFX3-206ENST00000442560 NBPF6Q5VWK0 638 aa9.95□□□□□ -0.82
RFX3-206ENST00000442560 CDAN1Q8IWY9 1227 aa9.95□□□□□ -0.82
RFX3-206ENST00000442560 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
RFX3-206ENST00000442560 NBPF4Q96M43 638 aa9.95□□□□□ -0.82
RFX3-206ENST00000442560 PCDHB13Q9Y5F0 798 aa9.95□□□□□ -0.82
RFX3-206ENST00000442560 ANKRD36BQ8N2N9 1353 aa9.95□□□□□ -0.82
RFX3-206ENST00000442560 MYOM1P52179 1685 aa9.94□□□□□ -0.82
RFX3-206ENST00000442560 PNPLA7Q6ZV29 1317 aa9.94□□□□□ -0.82
RFX3-206ENST00000442560 PLCD3Q8N3E9 789 aa9.94□□□□□ -0.82
RFX3-206ENST00000442560 TFCP2L1Q9NZI6 479 aa9.94□□□□□ -0.82
RFX3-206ENST00000442560 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
RFX3-206ENST00000442560 POLD1P28340 1107 aa9.93□□□□□ -0.82
RFX3-206ENST00000442560 SLC16A10Q8TF71 515 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms