RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 KCNQ4P56696 695 aa15.44■□□□□ 0.06
GACAT3-202ENST00000442387 GPR162Q16538 588 aa15.44■□□□□ 0.06
GACAT3-202ENST00000442387 RTL1A6NKG5 1358 aa15.44■□□□□ 0.06
GACAT3-202ENST00000442387 NSD2O96028 1365 aa15.43■□□□□ 0.06
GACAT3-202ENST00000442387 MEGF6O75095 1541 aa15.43■□□□□ 0.06
GACAT3-202ENST00000442387 CCNL1Q9UK58 526 aaPredicted RBP15.42■□□□□ 0.06
GACAT3-202ENST00000442387 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
GACAT3-202ENST00000442387 NBPF6Q5VWK0 638 aa15.41■□□□□ 0.06
GACAT3-202ENST00000442387 NBPF4Q96M43 638 aa15.41■□□□□ 0.06
GACAT3-202ENST00000442387 CGNL1Q0VF96 1302 aa15.41■□□□□ 0.06
GACAT3-202ENST00000442387 QSER1Q2KHR3 1735 aa15.4■□□□□ 0.06
GACAT3-202ENST00000442387 DOT1LQ8TEK3 1739 aa15.4■□□□□ 0.06
GACAT3-202ENST00000442387 USP47Q96K76 1375 aa15.4■□□□□ 0.06
GACAT3-202ENST00000442387 PELP1Q8IZL8 1130 aaKnown RBP15.4■□□□□ 0.06
GACAT3-202ENST00000442387 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
GACAT3-202ENST00000442387 FYB1O15117 783 aa15.39■□□□□ 0.05
GACAT3-202ENST00000442387 USHBP1Q8N6Y0 703 aa15.39■□□□□ 0.05
GACAT3-202ENST00000442387 RAPGEF4Q8WZA2 1011 aa15.39■□□□□ 0.05
GACAT3-202ENST00000442387 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
GACAT3-202ENST00000442387 MSH5O43196 834 aa15.38■□□□□ 0.05
GACAT3-202ENST00000442387 TATP17735 454 aaPredicted RBP15.38■□□□□ 0.05
GACAT3-202ENST00000442387 C1QTNF8P60827 252 aa15.38■□□□□ 0.05
GACAT3-202ENST00000442387 TMF1P82094 1093 aa15.38■□□□□ 0.05
GACAT3-202ENST00000442387 NLGN2Q8NFZ4 835 aa15.38■□□□□ 0.05
GACAT3-202ENST00000442387 LY75O60449 1722 aa15.37■□□□□ 0.05
GACAT3-202ENST00000442387 SHANK3Q9BYB0 1731 aa15.37■□□□□ 0.05
GACAT3-202ENST00000442387 SENP3-EIF4A1A0A087X0R7 540 aa15.37■□□□□ 0.05
GACAT3-202ENST00000442387 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
GACAT3-202ENST00000442387 COL23A1Q86Y22 540 aaPredicted RBP15.36■□□□□ 0.05
GACAT3-202ENST00000442387 PCDH11XQ9BZA7 1347 aa15.36■□□□□ 0.05
GACAT3-202ENST00000442387 PCDH11YQ9BZA8 1340 aa15.36■□□□□ 0.05
GACAT3-202ENST00000442387 HMGB2P26583 209 aaKnown RBP15.35■□□□□ 0.05
GACAT3-202ENST00000442387 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
GACAT3-202ENST00000442387 INSRP06213 1382 aa15.35■□□□□ 0.05
GACAT3-202ENST00000442387 FLT4P35916 1363 aa15.35■□□□□ 0.05
GACAT3-202ENST00000442387 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
GACAT3-202ENST00000442387 TUBGCP6Q96RT7 1819 aa15.34■□□□□ 0.05
GACAT3-202ENST00000442387 CHD4Q14839 1912 aa15.34■□□□□ 0.05
GACAT3-202ENST00000442387 KIF24Q5T7B8 1368 aa15.34■□□□□ 0.05
GACAT3-202ENST00000442387 KAT6BQ8WYB5 2073 aa15.33■□□□□ 0.04
GACAT3-202ENST00000442387 GIGYF1O75420 1035 aaPredicted RBP15.33■□□□□ 0.04
GACAT3-202ENST00000442387 CDCA8Q53HL2 280 aa15.33■□□□□ 0.04
GACAT3-202ENST00000442387 MSL1Q68DK7 614 aa15.33■□□□□ 0.04
GACAT3-202ENST00000442387 GOLGB1Q14789 3259 aaKnown RBP15.33■□□□□ 0.04
GACAT3-202ENST00000442387 GRIN3BO60391 1043 aa15.32■□□□□ 0.04
GACAT3-202ENST00000442387 FLAD1Q8NFF5 587 aa15.32■□□□□ 0.04
GACAT3-202ENST00000442387 PALLDQ8WX93 1383 aa15.32■□□□□ 0.04
GACAT3-202ENST00000442387 YBX3P16989 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
GACAT3-202ENST00000442387 MPRIPQ6WCQ1 1025 aa15.31■□□□□ 0.04
GACAT3-202ENST00000442387 CYP27B1O15528 508 aa15.3■□□□□ 0.04
GACAT3-202ENST00000442387 SMARCC1Q92922 1105 aaPredicted RBP15.29■□□□□ 0.04
GACAT3-202ENST00000442387 EMILIN1Q9Y6C2 1016 aa15.29■□□□□ 0.04
GACAT3-202ENST00000442387 C5P01031 1676 aa15.28■□□□□ 0.04
GACAT3-202ENST00000442387 AK7Q96M32 723 aa15.28■□□□□ 0.04
GACAT3-202ENST00000442387 CD2APQ9Y5K6 639 aa15.28■□□□□ 0.04
GACAT3-202ENST00000442387 NSD3Q9BZ95 1437 aa15.27■□□□□ 0.04
GACAT3-202ENST00000442387 CARD14Q9BXL6 1004 aa15.27■□□□□ 0.04
GACAT3-202ENST00000442387 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.03
GACAT3-202ENST00000442387 PPM1GO15355 546 aaPredicted RBP15.26■□□□□ 0.03
GACAT3-202ENST00000442387 SPG7Q9UQ90 795 aa15.26■□□□□ 0.03
GACAT3-202ENST00000442387 NKX1-1Q15270 411 aaPredicted RBP15.25■□□□□ 0.03
GACAT3-202ENST00000442387 PIGBQ92521 554 aa15.25■□□□□ 0.03
GACAT3-202ENST00000442387 NCAPD2Q15021 1401 aa15.25■□□□□ 0.03
GACAT3-202ENST00000442387 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
GACAT3-202ENST00000442387 TOGARAM1Q9Y4F4 1720 aa15.24■□□□□ 0.03
GACAT3-202ENST00000442387 PHF14O94880 888 aa15.24■□□□□ 0.03
GACAT3-202ENST00000442387 WASHC2AQ641Q2 1341 aa15.23■□□□□ 0.03
GACAT3-202ENST00000442387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.23■□□□□ 0.03
GACAT3-202ENST00000442387 AMIGO3Q86WK7 504 aa15.23■□□□□ 0.03
GACAT3-202ENST00000442387 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
GACAT3-202ENST00000442387 PKD1L3Q7Z443 1732 aa15.23■□□□□ 0.03
GACAT3-202ENST00000442387 LOC102724428A0A0B4J2F2 783 aa15.22■□□□□ 0.03
GACAT3-202ENST00000442387 SSFA2P28290 1259 aa15.22■□□□□ 0.03
GACAT3-202ENST00000442387 SIK1P57059 783 aa15.22■□□□□ 0.03
GACAT3-202ENST00000442387 TRIM26Q12899 539 aaPredicted RBP15.22■□□□□ 0.03
GACAT3-202ENST00000442387 EYA1Q99502 592 aa15.22■□□□□ 0.03
GACAT3-202ENST00000442387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.03
GACAT3-202ENST00000442387 TMOD3Q9NYL9 352 aa15.22■□□□□ 0.03
GACAT3-202ENST00000442387 SMIM5Q71RC9 77 aa15.21■□□□□ 0.03
GACAT3-202ENST00000442387 LINC00116Q8NCU8 138 aa15.21■□□□□ 0.03
GACAT3-202ENST00000442387 IGSF1Q8N6C5 1336 aa15.2■□□□□ 0.02
GACAT3-202ENST00000442387 TAF1LQ8IZX4 1826 aa15.2■□□□□ 0.02
GACAT3-202ENST00000442387 IFNL2Q8IZJ0 200 aa15.2■□□□□ 0.02
GACAT3-202ENST00000442387 PHKG2P15735 406 aa15.19■□□□□ 0.02
GACAT3-202ENST00000442387 ATP6V1AP38606 617 aa15.19■□□□□ 0.02
GACAT3-202ENST00000442387 GPBP1L1Q9HC44 474 aaPredicted RBP15.19■□□□□ 0.02
GACAT3-202ENST00000442387 POLKQ9UBT6 870 aa15.19■□□□□ 0.02
GACAT3-202ENST00000442387 ASAP1Q9ULH1 1129 aa15.19■□□□□ 0.02
GACAT3-202ENST00000442387 ANKRD26Q9UPS8 1709 aa15.18■□□□□ 0.02
GACAT3-202ENST00000442387 ITGB4P16144 1822 aa15.18■□□□□ 0.02
GACAT3-202ENST00000442387 GNPATO15228 680 aa15.18■□□□□ 0.02
GACAT3-202ENST00000442387 ITPK1Q13572 414 aa15.18■□□□□ 0.02
GACAT3-202ENST00000442387 ADCY9O60503 1353 aa15.18■□□□□ 0.02
GACAT3-202ENST00000442387 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
GACAT3-202ENST00000442387 PLEKHG2Q9H7P9 1386 aa15.16■□□□□ 0.02
GACAT3-202ENST00000442387 EIF4A2Q14240 407 aaKnown RBP15.16■□□□□ 0.02
GACAT3-202ENST00000442387 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
GACAT3-202ENST00000442387 POLR3GLQ9BT43 218 aa15.16■□□□□ 0.02
GACAT3-202ENST00000442387 ATG3Q9NT62 314 aa15.16■□□□□ 0.02
GACAT3-202ENST00000442387 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms