RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 RAPGEF4Q8WZA2 1011 aa22.89■■□□□ 1.25
IRF3-204ENST00000442265 NCAPD2Q15021 1401 aa22.89■■□□□ 1.25
IRF3-204ENST00000442265 BTAF1O14981 1849 aa22.88■■□□□ 1.25
IRF3-204ENST00000442265 STK32BQ9NY57 414 aa22.88■■□□□ 1.25
IRF3-204ENST00000442265 SHANK3Q9BYB0 1731 aa22.88■■□□□ 1.25
IRF3-204ENST00000442265 CASZ1Q86V15 1759 aa22.87■■□□□ 1.25
IRF3-204ENST00000442265 USHBP1Q8N6Y0 703 aa22.87■■□□□ 1.25
IRF3-204ENST00000442265 TATP17735 454 aaPredicted RBP22.86■■□□□ 1.25
IRF3-204ENST00000442265 PANK3Q9H999 370 aa22.86■■□□□ 1.25
IRF3-204ENST00000442265 POLKQ9UBT6 870 aa22.86■■□□□ 1.25
IRF3-204ENST00000442265 PAPPAQ13219 1627 aa22.86■■□□□ 1.25
IRF3-204ENST00000442265 PRIM1P49642 420 aaKnown RBP22.85■■□□□ 1.25
IRF3-204ENST00000442265 POLR3GLQ9BT43 218 aa22.85■■□□□ 1.25
IRF3-204ENST00000442265 NSD2O96028 1365 aa22.85■■□□□ 1.25
IRF3-204ENST00000442265 SLC27A3Q5K4L6 730 aa22.84■■□□□ 1.25
IRF3-204ENST00000442265 PDGFDQ9GZP0 370 aaPredicted RBP22.84■■□□□ 1.25
IRF3-204ENST00000442265 LRRC4BQ9NT99 713 aa22.84■■□□□ 1.25
IRF3-204ENST00000442265 PCDH11XQ9BZA7 1347 aa22.82■■□□□ 1.24
IRF3-204ENST00000442265 PCDH11YQ9BZA8 1340 aa22.82■■□□□ 1.24
IRF3-204ENST00000442265 PPM1GO15355 546 aaPredicted RBP22.81■■□□□ 1.24
IRF3-204ENST00000442265 SYTL4Q96C24 671 aaPredicted RBP22.79■■□□□ 1.24
IRF3-204ENST00000442265 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
IRF3-204ENST00000442265 PLEKHG2Q9H7P9 1386 aa22.78■■□□□ 1.24
IRF3-204ENST00000442265 CYP27B1O15528 508 aa22.78■■□□□ 1.24
IRF3-204ENST00000442265 PTGER2P43116 358 aa22.78■■□□□ 1.24
IRF3-204ENST00000442265 AKT1S1Q96B36 256 aa22.78■■□□□ 1.24
IRF3-204ENST00000442265 EYA1Q99502 592 aa22.78■■□□□ 1.24
IRF3-204ENST00000442265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.78■■□□□ 1.24
IRF3-204ENST00000442265 MAP2P11137 1827 aaKnown RBP22.78■■□□□ 1.24
IRF3-204ENST00000442265 ZNF827Q17R98 1081 aa22.77■■□□□ 1.24
IRF3-204ENST00000442265 ZBTB7AO95365 584 aa22.76■■□□□ 1.23
IRF3-204ENST00000442265 NKX1-1Q15270 411 aaPredicted RBP22.76■■□□□ 1.23
IRF3-204ENST00000442265 MTFR1LQ9H019 292 aa22.76■■□□□ 1.23
IRF3-204ENST00000442265 PPP1R1BQ9UD71 204 aaPredicted RBP22.76■■□□□ 1.23
IRF3-204ENST00000442265 KAT6BQ8WYB5 2073 aa22.76■■□□□ 1.23
IRF3-204ENST00000442265 PKD1L3Q7Z443 1732 aa22.75■■□□□ 1.23
IRF3-204ENST00000442265 EIF4A2Q14240 407 aaKnown RBP22.75■■□□□ 1.23
IRF3-204ENST00000442265 SGIP1Q9BQI5 828 aa22.74■■□□□ 1.23
IRF3-204ENST00000442265 SPG7Q9UQ90 795 aa22.74■■□□□ 1.23
IRF3-204ENST00000442265 LY75O60449 1722 aa22.74■■□□□ 1.23
IRF3-204ENST00000442265 TNNT2P45379 298 aaPredicted RBP22.73■■□□□ 1.23
IRF3-204ENST00000442265 KIF7Q2M1P5 1343 aa22.73■■□□□ 1.23
IRF3-204ENST00000442265 KNSTRNQ9Y448 316 aa22.72■■□□□ 1.23
IRF3-204ENST00000442265 ATF5Q9Y2D1 282 aaPredicted RBP22.71■■□□□ 1.23
IRF3-204ENST00000442265 IGSF1Q8N6C5 1336 aa22.71■■□□□ 1.23
IRF3-204ENST00000442265 AMER1Q5JTC6 1135 aaPredicted RBP22.7■■□□□ 1.22
IRF3-204ENST00000442265 MORC1Q86VD1 984 aa22.7■■□□□ 1.22
IRF3-204ENST00000442265 SLC16A10Q8TF71 515 aa22.7■■□□□ 1.22
IRF3-204ENST00000442265 QSER1Q2KHR3 1735 aa22.69■■□□□ 1.22
IRF3-204ENST00000442265 HMGB2P26583 209 aaKnown RBP22.69■■□□□ 1.22
IRF3-204ENST00000442265 CCNL1Q9UK58 526 aaPredicted RBP22.69■■□□□ 1.22
IRF3-204ENST00000442265 KCNQ4P56696 695 aa22.68■■□□□ 1.22
IRF3-204ENST00000442265 PNPLA7Q6ZV29 1317 aa22.67■■□□□ 1.22
IRF3-204ENST00000442265 TOGARAM1Q9Y4F4 1720 aa22.66■■□□□ 1.22
IRF3-204ENST00000442265 PER1O15534 1290 aaPredicted RBP22.66■■□□□ 1.22
IRF3-204ENST00000442265 MPRIPQ6WCQ1 1025 aa22.66■■□□□ 1.22
IRF3-204ENST00000442265 PHKG2P15735 406 aa22.65■■□□□ 1.22
IRF3-204ENST00000442265 IFNL2Q8IZJ0 200 aa22.65■■□□□ 1.22
IRF3-204ENST00000442265 SMARCC1Q92922 1105 aaPredicted RBP22.65■■□□□ 1.22
IRF3-204ENST00000442265 TFCP2L1Q9NZI6 479 aa22.65■■□□□ 1.22
IRF3-204ENST00000442265 PALLDQ8WX93 1383 aa22.64■■□□□ 1.22
IRF3-204ENST00000442265 PIGBQ92521 554 aa22.64■■□□□ 1.21
IRF3-204ENST00000442265 MAP3K5Q99683 1374 aa22.63■■□□□ 1.21
IRF3-204ENST00000442265 UTRNP46939 3433 aa22.62■■□□□ 1.21
IRF3-204ENST00000442265 COL24A1Q17RW2 1714 aa22.61■■□□□ 1.21
IRF3-204ENST00000442265 ARXQ96QS3 562 aa22.61■■□□□ 1.21
IRF3-204ENST00000442265 SYT17Q9BSW7 474 aa22.61■■□□□ 1.21
IRF3-204ENST00000442265 ITGB4P16144 1822 aa22.6■■□□□ 1.21
IRF3-204ENST00000442265 FHDC1Q9C0D6 1143 aaPredicted RBP22.6■■□□□ 1.21
IRF3-204ENST00000442265 KDRP35968 1356 aa22.6■■□□□ 1.21
IRF3-204ENST00000442265 IL13P35225 146 aa22.59■■□□□ 1.21
IRF3-204ENST00000442265 AMOTQ4VCS5 1084 aa22.59■■□□□ 1.21
IRF3-204ENST00000442265 NPC1L1Q9UHC9 1359 aa22.59■■□□□ 1.21
IRF3-204ENST00000442265 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
IRF3-204ENST00000442265 TMOD3Q9NYL9 352 aa22.58■■□□□ 1.21
IRF3-204ENST00000442265 TUBGCP6Q96RT7 1819 aa22.58■■□□□ 1.21
IRF3-204ENST00000442265 DCAF8L1A6NGE4 600 aa22.57■■□□□ 1.2
IRF3-204ENST00000442265 ERVV-2B6SEH9 535 aa22.57■■□□□ 1.2
IRF3-204ENST00000442265 COL23A1Q86Y22 540 aaPredicted RBP22.57■■□□□ 1.2
IRF3-204ENST00000442265 DCAF5Q96JK2 942 aa22.57■■□□□ 1.2
IRF3-204ENST00000442265 C5P01031 1676 aa22.57■■□□□ 1.2
IRF3-204ENST00000442265 HSP90AB1P08238 724 aaKnown RBP22.56■■□□□ 1.2
IRF3-204ENST00000442265 FLAD1Q8NFF5 587 aa22.56■■□□□ 1.2
IRF3-204ENST00000442265 POLD1P28340 1107 aa22.55■■□□□ 1.2
IRF3-204ENST00000442265 AEBP1Q8IUX7 1158 aa22.55■■□□□ 1.2
IRF3-204ENST00000442265 LOC102724428A0A0B4J2F2 783 aa22.54■■□□□ 1.2
IRF3-204ENST00000442265 MTHFSP49914 203 aa22.54■■□□□ 1.2
IRF3-204ENST00000442265 SIK1P57059 783 aa22.54■■□□□ 1.2
IRF3-204ENST00000442265 ASAP1Q9ULH1 1129 aa22.54■■□□□ 1.2
IRF3-204ENST00000442265 TAF1LQ8IZX4 1826 aa22.54■■□□□ 1.2
IRF3-204ENST00000442265 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
IRF3-204ENST00000442265 SULT6B1Q6IMI4 303 aa22.53■■□□□ 1.2
IRF3-204ENST00000442265 ATG3Q9NT62 314 aa22.53■■□□□ 1.2
IRF3-204ENST00000442265 ZNF530Q6P9A1 599 aaPredicted RBP22.52■■□□□ 1.2
IRF3-204ENST00000442265 C4BP0C0L5 1744 aa22.51■■□□□ 1.19
IRF3-204ENST00000442265 KDM6AO15550 1401 aaPredicted RBP22.51■■□□□ 1.19
IRF3-204ENST00000442265 CC2D1BQ5T0F9 858 aaKnown RBP22.49■■□□□ 1.19
IRF3-204ENST00000442265 LINC00116Q8NCU8 138 aa22.49■■□□□ 1.19
IRF3-204ENST00000442265 AK7Q96M32 723 aa22.49■■□□□ 1.19
IRF3-204ENST00000442265 ITPK1Q13572 414 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms