RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 CHIC2Q9UKJ5 165 aa10.96□□□□□ -0.65
EPHA4-208ENST00000441679 ABCC5O15440 1437 aa10.95□□□□□ -0.66
EPHA4-208ENST00000441679 SOX11P35716 441 aa10.95□□□□□ -0.66
EPHA4-208ENST00000441679 COPS2P61201 443 aa10.95□□□□□ -0.66
EPHA4-208ENST00000441679 SPSB2Q99619 263 aa10.95□□□□□ -0.66
EPHA4-208ENST00000441679 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
EPHA4-208ENST00000441679 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
EPHA4-208ENST00000441679 NCOA1Q15788 1441 aa10.93□□□□□ -0.66
EPHA4-208ENST00000441679 RAPGEF3O95398 923 aa10.93□□□□□ -0.66
EPHA4-208ENST00000441679 DNMT1P26358 1616 aaKnown RBP10.93□□□□□ -0.66
EPHA4-208ENST00000441679 MLH3Q9UHC1 1453 aa10.93□□□□□ -0.66
EPHA4-208ENST00000441679 C9orf84Q5VXU9 1444 aa10.92□□□□□ -0.66
EPHA4-208ENST00000441679 SAMD9LQ8IVG5 1584 aa10.92□□□□□ -0.66
EPHA4-208ENST00000441679 F12P00748 615 aaPredicted RBP10.92□□□□□ -0.66
EPHA4-208ENST00000441679 FKBPLQ9UIM3 349 aa10.92□□□□□ -0.66
EPHA4-208ENST00000441679 ABCC1P33527 1531 aa10.92□□□□□ -0.66
EPHA4-208ENST00000441679 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
EPHA4-208ENST00000441679 ZC3H4Q9UPT8 1303 aaKnown RBP10.91□□□□□ -0.66
EPHA4-208ENST00000441679 CCNYL3P0C7X3 344 aa10.91□□□□□ -0.66
EPHA4-208ENST00000441679 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
EPHA4-208ENST00000441679 CTHP32929 405 aa10.91□□□□□ -0.66
EPHA4-208ENST00000441679 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.66
EPHA4-208ENST00000441679 MMRN1Q13201 1228 aa10.91□□□□□ -0.66
EPHA4-208ENST00000441679 ADAMTS19Q8TE59 1207 aa10.91□□□□□ -0.66
EPHA4-208ENST00000441679 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
EPHA4-208ENST00000441679 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
EPHA4-208ENST00000441679 DHX29Q7Z478 1369 aaKnown RBP10.9□□□□□ -0.66
EPHA4-208ENST00000441679 SYCP2Q9BX26 1530 aa10.9□□□□□ -0.66
EPHA4-208ENST00000441679 ADGRL2O95490 1459 aa10.9□□□□□ -0.66
EPHA4-208ENST00000441679 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.66
EPHA4-208ENST00000441679 DXOO77932 396 aaKnown RBP10.9□□□□□ -0.66
EPHA4-208ENST00000441679 SEMA3FQ13275 785 aa10.9□□□□□ -0.66
EPHA4-208ENST00000441679 ALG2Q9H553 416 aa10.9□□□□□ -0.66
EPHA4-208ENST00000441679 MAP10Q9P2G4 905 aa10.9□□□□□ -0.66
EPHA4-208ENST00000441679 TRAPPC8Q9Y2L5 1435 aa10.9□□□□□ -0.66
EPHA4-208ENST00000441679 NR1H3Q13133 447 aa10.89□□□□□ -0.67
EPHA4-208ENST00000441679 FAM160A2Q8N612 972 aaPredicted RBP10.89□□□□□ -0.67
EPHA4-208ENST00000441679 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
EPHA4-208ENST00000441679 NUDT12Q9BQG2 462 aa10.89□□□□□ -0.67
EPHA4-208ENST00000441679 MAST1Q9Y2H9 1570 aa10.89□□□□□ -0.67
EPHA4-208ENST00000441679 KIF15Q9NS87 1388 aa10.89□□□□□ -0.67
EPHA4-208ENST00000441679 ZPR1O75312 459 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 TSPOAP1O95153 1857 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 ADH1BP00325 375 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 MMP16P51512 607 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 ARMC2Q8NEN0 867 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 MTRQ99707 1265 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 ESF1Q9H501 851 aaKnown RBP10.88□□□□□ -0.67
EPHA4-208ENST00000441679 ANKRD50Q9ULJ7 1429 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 DUOX2Q9NRD8 1548 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 KANK1Q14678 1352 aa10.88□□□□□ -0.67
EPHA4-208ENST00000441679 CLSPNQ9HAW4 1339 aa10.87□□□□□ -0.67
EPHA4-208ENST00000441679 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
EPHA4-208ENST00000441679 PTPN5P54829 565 aa10.87□□□□□ -0.67
EPHA4-208ENST00000441679 EVA1BQ9NVM1 165 aa10.87□□□□□ -0.67
EPHA4-208ENST00000441679 ARHGEF12Q9NZN5 1544 aa10.87□□□□□ -0.67
EPHA4-208ENST00000441679 ATP10AO60312 1499 aa10.87□□□□□ -0.67
EPHA4-208ENST00000441679 ERBINQ96RT1 1412 aa10.86□□□□□ -0.67
EPHA4-208ENST00000441679 TLL1O43897 1013 aa10.86□□□□□ -0.67
EPHA4-208ENST00000441679 KCNH2Q12809 1159 aa10.86□□□□□ -0.67
EPHA4-208ENST00000441679 PRDM9Q9NQV7 894 aa10.86□□□□□ -0.67
EPHA4-208ENST00000441679 NAIPQ13075 1403 aa10.85□□□□□ -0.67
EPHA4-208ENST00000441679 KIF3BO15066 747 aa10.85□□□□□ -0.67
EPHA4-208ENST00000441679 FBXO45P0C2W1 286 aa10.85□□□□□ -0.67
EPHA4-208ENST00000441679 GPKOWQ92917 476 aaPredicted RBP eCLIP10.85□□□□□ -0.67
EPHA4-208ENST00000441679 PPP1R12CQ9BZL4 782 aa10.85□□□□□ -0.67
EPHA4-208ENST00000441679 IL21Q9HBE4 155 aa10.85□□□□□ -0.67
EPHA4-208ENST00000441679 KDM5CP41229 1560 aa10.85□□□□□ -0.67
EPHA4-208ENST00000441679 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
EPHA4-208ENST00000441679 ATP7AQ04656 1500 aa10.84□□□□□ -0.67
EPHA4-208ENST00000441679 NBPF14Q5TI25 921 aa10.84□□□□□ -0.67
EPHA4-208ENST00000441679 RAB3GAP2Q9H2M9 1393 aa10.84□□□□□ -0.67
EPHA4-208ENST00000441679 PLXNC1O60486 1568 aa10.83□□□□□ -0.68
EPHA4-208ENST00000441679 A2MP01023 1474 aa10.83□□□□□ -0.68
EPHA4-208ENST00000441679 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
EPHA4-208ENST00000441679 ZNF592Q92610 1267 aa10.83□□□□□ -0.68
EPHA4-208ENST00000441679 PBXIP1Q96AQ6 731 aa10.83□□□□□ -0.68
EPHA4-208ENST00000441679 GPSM3Q9Y4H4 160 aa10.83□□□□□ -0.68
EPHA4-208ENST00000441679 ZMYM4Q5VZL5 1548 aa10.83□□□□□ -0.68
EPHA4-208ENST00000441679 HECW2Q9P2P5 1572 aa10.82□□□□□ -0.68
EPHA4-208ENST00000441679 ZEB1P37275 1124 aaPredicted RBP10.82□□□□□ -0.68
EPHA4-208ENST00000441679 PTK2Q05397 1052 aa10.82□□□□□ -0.68
EPHA4-208ENST00000441679 SLC6A16Q9GZN6 736 aa10.82□□□□□ -0.68
EPHA4-208ENST00000441679 CROCC2H7BZ55 1655 aa10.82□□□□□ -0.68
EPHA4-208ENST00000441679 PPRC1Q5VV67 1664 aaKnown RBP10.82□□□□□ -0.68
EPHA4-208ENST00000441679 ADGBQ8N7X0 1667 aa10.82□□□□□ -0.68
EPHA4-208ENST00000441679 ARID4BQ4LE39 1312 aaPredicted RBP10.82□□□□□ -0.68
EPHA4-208ENST00000441679 WASHC2CQ9Y4E1 1318 aa10.82□□□□□ -0.68
EPHA4-208ENST00000441679 KDM6BO15054 1643 aa10.81□□□□□ -0.68
EPHA4-208ENST00000441679 NUP155O75694 1391 aa10.81□□□□□ -0.68
EPHA4-208ENST00000441679 PALM3A6NDB9 673 aaPredicted RBP10.81□□□□□ -0.68
EPHA4-208ENST00000441679 RFX1P22670 979 aa10.81□□□□□ -0.68
EPHA4-208ENST00000441679 CFAP70Q5T0N1 1121 aa10.81□□□□□ -0.68
EPHA4-208ENST00000441679 PDXDC2PQ6P474 469 aa10.81□□□□□ -0.68
EPHA4-208ENST00000441679 ZFYVE16Q7Z3T8 1539 aa10.8□□□□□ -0.68
EPHA4-208ENST00000441679 PDE4CQ08493 712 aa10.8□□□□□ -0.68
EPHA4-208ENST00000441679 TJAP1Q5JTD0 557 aa10.8□□□□□ -0.68
EPHA4-208ENST00000441679 GGT6Q6P531 493 aa10.8□□□□□ -0.68
EPHA4-208ENST00000441679 CCDC24Q8N4L8 307 aa10.8□□□□□ -0.68
EPHA4-208ENST00000441679 RETREG2Q8NC44 543 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms