RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.28
CPSF4-206ENST00000441580 TRIM27P14373 513 aa16.83■□□□□ 0.28
CPSF4-206ENST00000441580 TWISTNBQ3B726 338 aaPredicted RBP16.83■□□□□ 0.28
CPSF4-206ENST00000441580 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
CPSF4-206ENST00000441580 RLBP1P12271 317 aa16.82■□□□□ 0.28
CPSF4-206ENST00000441580 MTHFSDQ2M296 383 aaKnown RBP16.82■□□□□ 0.28
CPSF4-206ENST00000441580 ARHGAP45Q92619 1136 aa16.82■□□□□ 0.28
CPSF4-206ENST00000441580 CHMP4BQ9H444 224 aaKnown RBP16.82■□□□□ 0.28
CPSF4-206ENST00000441580 CHL1O00533 1208 aa16.81■□□□□ 0.28
CPSF4-206ENST00000441580 ARHGEF25Q86VW2 580 aa16.81■□□□□ 0.28
CPSF4-206ENST00000441580 RGPD2P0DJD1 1756 aa16.81■□□□□ 0.28
CPSF4-206ENST00000441580 SOS1Q07889 1333 aaPredicted RBP16.8■□□□□ 0.28
CPSF4-206ENST00000441580 VAMP4O75379 141 aa16.8■□□□□ 0.28
CPSF4-206ENST00000441580 GCP02774 474 aa16.8■□□□□ 0.28
CPSF4-206ENST00000441580 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
CPSF4-206ENST00000441580 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
CPSF4-206ENST00000441580 BABAM1Q9NWV8 329 aa16.79■□□□□ 0.28
CPSF4-206ENST00000441580 NOB1Q9ULX3 412 aaKnown RBP16.79■□□□□ 0.28
CPSF4-206ENST00000441580 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
CPSF4-206ENST00000441580 XPCQ01831 940 aaPredicted RBP16.78■□□□□ 0.28
CPSF4-206ENST00000441580 MCM10Q7L590 875 aa16.78■□□□□ 0.28
CPSF4-206ENST00000441580 ITPRIPQ8IWB1 547 aa16.78■□□□□ 0.28
CPSF4-206ENST00000441580 MRPL50Q8N5N7 158 aaKnown RBP16.78■□□□□ 0.28
CPSF4-206ENST00000441580 API5Q9BZZ5 524 aaKnown RBP16.78■□□□□ 0.28
CPSF4-206ENST00000441580 KDM3BQ7LBC6 1761 aa16.77■□□□□ 0.28
CPSF4-206ENST00000441580 ABCC4O15439 1325 aa16.77■□□□□ 0.28
CPSF4-206ENST00000441580 ABCA3Q99758 1704 aa16.77■□□□□ 0.28
CPSF4-206ENST00000441580 LTV1Q96GA3 475 aaPredicted RBP16.77■□□□□ 0.28
CPSF4-206ENST00000441580 TNNQ9UQP3 1299 aa16.77■□□□□ 0.28
CPSF4-206ENST00000441580 NHSL1Q5SYE7 1610 aa16.77■□□□□ 0.27
CPSF4-206ENST00000441580 COL18A1P39060 1754 aa16.77■□□□□ 0.27
CPSF4-206ENST00000441580 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
CPSF4-206ENST00000441580 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
CPSF4-206ENST00000441580 ADAMTS7Q9UKP4 1686 aa16.75■□□□□ 0.27
CPSF4-206ENST00000441580 TSPYL6Q8N831 410 aa16.75■□□□□ 0.27
CPSF4-206ENST00000441580 RWDD1Q9H446 243 aaPredicted RBP16.75■□□□□ 0.27
CPSF4-206ENST00000441580 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
CPSF4-206ENST00000441580 CPDO75976 1380 aa16.75■□□□□ 0.27
CPSF4-206ENST00000441580 CEMIPQ8WUJ3 1361 aa16.75■□□□□ 0.27
CPSF4-206ENST00000441580 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
CPSF4-206ENST00000441580 TMEM57Q8N5G2 664 aa16.74■□□□□ 0.27
CPSF4-206ENST00000441580 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
CPSF4-206ENST00000441580 ERBB3P21860 1342 aa16.73■□□□□ 0.27
CPSF4-206ENST00000441580 ZBTB7CA1YPR0 619 aa16.73■□□□□ 0.27
CPSF4-206ENST00000441580 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
CPSF4-206ENST00000441580 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
CPSF4-206ENST00000441580 PTPRCP08575 1304 aa16.72■□□□□ 0.27
CPSF4-206ENST00000441580 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
CPSF4-206ENST00000441580 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
CPSF4-206ENST00000441580 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
CPSF4-206ENST00000441580 NBPF6Q5VWK0 638 aa16.72■□□□□ 0.27
CPSF4-206ENST00000441580 NBPF4Q96M43 638 aa16.72■□□□□ 0.27
CPSF4-206ENST00000441580 PKD1L3Q7Z443 1732 aa16.71■□□□□ 0.27
CPSF4-206ENST00000441580 PLEKHO1Q53GL0 409 aaPredicted RBP16.71■□□□□ 0.27
CPSF4-206ENST00000441580 USHBP1Q8N6Y0 703 aa16.71■□□□□ 0.27
CPSF4-206ENST00000441580 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
CPSF4-206ENST00000441580 RGS12O14924 1447 aa16.7■□□□□ 0.26
CPSF4-206ENST00000441580 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
CPSF4-206ENST00000441580 SIPA1L3O60292 1781 aaPredicted RBP16.7■□□□□ 0.26
CPSF4-206ENST00000441580 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
CPSF4-206ENST00000441580 IGHDP01880 384 aa16.7■□□□□ 0.26
CPSF4-206ENST00000441580 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
CPSF4-206ENST00000441580 PCDHB15Q9Y5E8 787 aa16.7■□□□□ 0.26
CPSF4-206ENST00000441580 AKAP4Q5JQC9 854 aa16.69■□□□□ 0.26
CPSF4-206ENST00000441580 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
CPSF4-206ENST00000441580 ELL2O00472 640 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-206ENST00000441580 PDE4AP27815 886 aa16.68■□□□□ 0.26
CPSF4-206ENST00000441580 ANP32AP39687 249 aaKnown RBP16.68■□□□□ 0.26
CPSF4-206ENST00000441580 ZNF530Q6P9A1 599 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-206ENST00000441580 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
CPSF4-206ENST00000441580 BACH2Q9BYV9 841 aa16.68■□□□□ 0.26
CPSF4-206ENST00000441580 C1orf141Q5JVX7 400 aa16.67■□□□□ 0.26
CPSF4-206ENST00000441580 LRRC59Q96AG4 307 aaKnown RBP16.67■□□□□ 0.26
CPSF4-206ENST00000441580 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
CPSF4-206ENST00000441580 HOXB7P09629 217 aa16.66■□□□□ 0.26
CPSF4-206ENST00000441580 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
CPSF4-206ENST00000441580 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
CPSF4-206ENST00000441580 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
CPSF4-206ENST00000441580 MRC1P22897 1456 aa16.66■□□□□ 0.26
CPSF4-206ENST00000441580 SCN11AQ9UI33 1791 aa16.65■□□□□ 0.26
CPSF4-206ENST00000441580 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
CPSF4-206ENST00000441580 RGS3P49796 1198 aa16.64■□□□□ 0.25
CPSF4-206ENST00000441580 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
CPSF4-206ENST00000441580 KRT24Q2M2I5 525 aa16.63■□□□□ 0.25
CPSF4-206ENST00000441580 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
CPSF4-206ENST00000441580 SLAIN2Q9P270 581 aa16.63■□□□□ 0.25
CPSF4-206ENST00000441580 MEGF6O75095 1541 aa16.63■□□□□ 0.25
CPSF4-206ENST00000441580 AHDC1Q5TGY3 1603 aaPredicted RBP16.63■□□□□ 0.25
CPSF4-206ENST00000441580 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
CPSF4-206ENST00000441580 TEFQ10587 303 aa16.62■□□□□ 0.25
CPSF4-206ENST00000441580 SMC5Q8IY18 1101 aa16.62■□□□□ 0.25
CPSF4-206ENST00000441580 RAPGEF4Q8WZA2 1011 aa16.62■□□□□ 0.25
CPSF4-206ENST00000441580 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
CPSF4-206ENST00000441580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.62■□□□□ 0.25
CPSF4-206ENST00000441580 AXIN2Q9Y2T1 843 aa16.62■□□□□ 0.25
CPSF4-206ENST00000441580 ZBTB7BO15156 539 aaPredicted RBP16.61■□□□□ 0.25
CPSF4-206ENST00000441580 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
CPSF4-206ENST00000441580 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
CPSF4-206ENST00000441580 SKAP1Q86WV1 359 aa16.6■□□□□ 0.25
CPSF4-206ENST00000441580 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms