RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 NBPF4Q96M43 638 aa30.8■■■□□ 2.52
PDPK1-204ENST00000441549 NOB1Q9ULX3 412 aaKnown RBP30.8■■■□□ 2.52
PDPK1-204ENST00000441549 HAP1P54257 671 aaPredicted RBP30.79■■■□□ 2.52
PDPK1-204ENST00000441549 FTSJ3Q8IY81 847 aaKnown RBP30.79■■■□□ 2.52
PDPK1-204ENST00000441549 TSPYL6Q8N831 410 aa30.79■■■□□ 2.52
PDPK1-204ENST00000441549 TNNQ9UQP3 1299 aa30.79■■■□□ 2.52
PDPK1-204ENST00000441549 DDX17Q92841 729 aaKnown RBP30.78■■■□□ 2.52
PDPK1-204ENST00000441549 KIAA0232Q92628 1395 aa30.78■■■□□ 2.52
PDPK1-204ENST00000441549 NCAPD2Q15021 1401 aa30.78■■■□□ 2.52
PDPK1-204ENST00000441549 GNAT3A8MTJ3 354 aa30.78■■■□□ 2.52
PDPK1-204ENST00000441549 TRIM27P14373 513 aa30.78■■■□□ 2.52
PDPK1-204ENST00000441549 MVPQ14764 893 aaKnown RBP30.78■■■□□ 2.52
PDPK1-204ENST00000441549 BRINP3Q76B58 766 aa30.77■■■□□ 2.52
PDPK1-204ENST00000441549 C8orf58Q8NAV2 365 aa30.77■■■□□ 2.52
PDPK1-204ENST00000441549 SPATA31A3Q5VYP0 1347 aa30.76■■■□□ 2.51
PDPK1-204ENST00000441549 MAP3K5Q99683 1374 aa30.75■■■□□ 2.51
PDPK1-204ENST00000441549 LRRC37A3O60309 1634 aa30.75■■■□□ 2.51
PDPK1-204ENST00000441549 MRPL50Q8N5N7 158 aaKnown RBP30.75■■■□□ 2.51
PDPK1-204ENST00000441549 USHBP1Q8N6Y0 703 aa30.75■■■□□ 2.51
PDPK1-204ENST00000441549 ARHGAP45Q92619 1136 aa30.75■■■□□ 2.51
PDPK1-204ENST00000441549 ANKRD24Q8TF21 1146 aa30.74■■■□□ 2.51
PDPK1-204ENST00000441549 CAMTA1Q9Y6Y1 1673 aa30.74■■■□□ 2.51
PDPK1-204ENST00000441549 SLAIN2Q9P270 581 aa30.73■■■□□ 2.51
PDPK1-204ENST00000441549 TCERG1O14776 1098 aaKnown RBP30.73■■■□□ 2.51
PDPK1-204ENST00000441549 RBM19Q9Y4C8 960 aaKnown RBP30.73■■■□□ 2.51
PDPK1-204ENST00000441549 PLEKHG5O94827 1062 aa30.71■■■□□ 2.51
PDPK1-204ENST00000441549 RGPD2P0DJD1 1756 aa30.71■■■□□ 2.51
PDPK1-204ENST00000441549 ABCC6O95255 1503 aa30.71■■■□□ 2.51
PDPK1-204ENST00000441549 ELL2O00472 640 aaPredicted RBP30.7■■■□□ 2.51
PDPK1-204ENST00000441549 LRRC59Q96AG4 307 aaKnown RBP30.7■■■□□ 2.5
PDPK1-204ENST00000441549 BABAM1Q9NWV8 329 aa30.7■■■□□ 2.5
PDPK1-204ENST00000441549 DDX19BQ9UMR2 479 aa30.7■■■□□ 2.5
PDPK1-204ENST00000441549 AXIN2Q9Y2T1 843 aa30.7■■■□□ 2.5
PDPK1-204ENST00000441549 ZC3H6P61129 1189 aaKnown RBP30.68■■■□□ 2.5
PDPK1-204ENST00000441549 CRYBG1Q9Y4K1 1723 aa30.68■■■□□ 2.5
PDPK1-204ENST00000441549 TSPYL4Q9UJ04 414 aa30.67■■■□□ 2.5
PDPK1-204ENST00000441549 AMOTQ4VCS5 1084 aa30.67■■■□□ 2.5
PDPK1-204ENST00000441549 ERBB3P21860 1342 aa30.66■■■□□ 2.5
PDPK1-204ENST00000441549 SOS2Q07890 1332 aaPredicted RBP30.66■■■□□ 2.5
PDPK1-204ENST00000441549 PLEKHO1Q53GL0 409 aaPredicted RBP30.66■■■□□ 2.5
PDPK1-204ENST00000441549 IL17REQ8NFR9 667 aa30.65■■■□□ 2.5
PDPK1-204ENST00000441549 LMO7Q8WWI1 1683 aa30.64■■■□□ 2.5
PDPK1-204ENST00000441549 COL18A1P39060 1754 aa30.64■■■□□ 2.5
PDPK1-204ENST00000441549 TMEM57Q8N5G2 664 aa30.64■■■□□ 2.5
PDPK1-204ENST00000441549 CPDO75976 1380 aa30.64■■■□□ 2.49
PDPK1-204ENST00000441549 RGPD5Q99666 1765 aa30.63■■■□□ 2.49
PDPK1-204ENST00000441549 ITPRIPQ8IWB1 547 aa30.63■■■□□ 2.49
PDPK1-204ENST00000441549 IGHDP01880 384 aa30.62■■■□□ 2.49
PDPK1-204ENST00000441549 CEMIPQ8WUJ3 1361 aa30.62■■■□□ 2.49
PDPK1-204ENST00000441549 TAF7Q15545 349 aaPredicted RBP30.61■■■□□ 2.49
PDPK1-204ENST00000441549 AKAP4Q5JQC9 854 aa30.61■■■□□ 2.49
PDPK1-204ENST00000441549 API5Q9BZZ5 524 aaKnown RBP30.61■■■□□ 2.49
PDPK1-204ENST00000441549 PCDHB15Q9Y5E8 787 aa30.61■■■□□ 2.49
PDPK1-204ENST00000441549 MIS18AQ9NYP9 233 aa30.6■■■□□ 2.49
PDPK1-204ENST00000441549 SOS1Q07889 1333 aaPredicted RBP30.6■■■□□ 2.49
PDPK1-204ENST00000441549 KRT24Q2M2I5 525 aa30.59■■■□□ 2.49
PDPK1-204ENST00000441549 CABLES1Q8TDN4 633 aa30.59■■■□□ 2.49
PDPK1-204ENST00000441549 CHMP4BQ9H444 224 aaKnown RBP30.59■■■□□ 2.49
PDPK1-204ENST00000441549 ABCC4O15439 1325 aa30.58■■■□□ 2.49
PDPK1-204ENST00000441549 RWDD1Q9H446 243 aaPredicted RBP30.57■■■□□ 2.48
PDPK1-204ENST00000441549 FAM208AQ9UK61 1670 aaKnown RBP30.57■■■□□ 2.48
PDPK1-204ENST00000441549 ZNF530Q6P9A1 599 aaPredicted RBP30.56■■■□□ 2.48
PDPK1-204ENST00000441549 PLEKHG2Q9H7P9 1386 aa30.56■■■□□ 2.48
PDPK1-204ENST00000441549 OVOS2A0A0G2JMS6 1433 aa30.55■■■□□ 2.48
PDPK1-204ENST00000441549 ZBTB40Q9NUA8 1239 aa30.54■■■□□ 2.48
PDPK1-204ENST00000441549 NHSL1Q5SYE7 1610 aa30.54■■■□□ 2.48
PDPK1-204ENST00000441549 C1orf141Q5JVX7 400 aa30.53■■■□□ 2.48
PDPK1-204ENST00000441549 PTPRCP08575 1304 aa30.52■■■□□ 2.48
PDPK1-204ENST00000441549 AEBP2Q6ZN18 517 aaPredicted RBP30.51■■■□□ 2.47
PDPK1-204ENST00000441549 NLRP2Q9NX02 1062 aa30.5■■■□□ 2.47
PDPK1-204ENST00000441549 LGR6Q9HBX8 967 aa30.5■■■□□ 2.47
PDPK1-204ENST00000441549 HDAC1Q13547 482 aaPredicted RBP30.49■■■□□ 2.47
PDPK1-204ENST00000441549 CHRNA2Q15822 529 aa30.49■■■□□ 2.47
PDPK1-204ENST00000441549 RAPGEF4Q8WZA2 1011 aa30.49■■■□□ 2.47
PDPK1-204ENST00000441549 ZBTB7BO15156 539 aaPredicted RBP30.47■■■□□ 2.47
PDPK1-204ENST00000441549 CSB-PGBD3P0DP91 1061 aa30.47■■■□□ 2.47
PDPK1-204ENST00000441549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.47■■■□□ 2.471e-6■■■□□ 18.9
PDPK1-204ENST00000441549 RNMTO43148 476 aaKnown RBP30.47■■■□□ 2.47
PDPK1-204ENST00000441549 TATP17735 454 aaPredicted RBP30.46■■■□□ 2.47
PDPK1-204ENST00000441549 SKAP1Q86WV1 359 aa30.46■■■□□ 2.47
PDPK1-204ENST00000441549 SLC4A2P04920 1241 aa30.45■■■□□ 2.47
PDPK1-204ENST00000441549 TEFQ10587 303 aa30.45■■■□□ 2.47
PDPK1-204ENST00000441549 CCDC30Q5VVM6 783 aa30.45■■■□□ 2.47
PDPK1-204ENST00000441549 RGS12O14924 1447 aa30.44■■■□□ 2.46
PDPK1-204ENST00000441549 KDM3BQ7LBC6 1761 aa30.44■■■□□ 2.46
PDPK1-204ENST00000441549 ADAMTS7Q9UKP4 1686 aa30.44■■■□□ 2.46
PDPK1-204ENST00000441549 INTS3Q68E01 1043 aaKnown RBP30.44■■■□□ 2.46
PDPK1-204ENST00000441549 PDE4AP27815 886 aa30.43■■■□□ 2.46
PDPK1-204ENST00000441549 MPRIPQ6WCQ1 1025 aa30.43■■■□□ 2.46
PDPK1-204ENST00000441549 STK31Q9BXU1 1019 aa30.43■■■□□ 2.46
PDPK1-204ENST00000441549 ABCA3Q99758 1704 aa30.43■■■□□ 2.46
PDPK1-204ENST00000441549 PRDM11Q9NQV5 511 aa30.42■■■□□ 2.46
PDPK1-204ENST00000441549 SPG7Q9UQ90 795 aa30.42■■■□□ 2.46
PDPK1-204ENST00000441549 CHMP4AQ9BY43 222 aa30.42■■■□□ 2.46
PDPK1-204ENST00000441549 HOXB7P09629 217 aa30.41■■■□□ 2.46
PDPK1-204ENST00000441549 BACH2Q9BYV9 841 aa30.41■■■□□ 2.46
PDPK1-204ENST00000441549 VIRMAQ69YN4 1812 aaKnown RBP30.39■■■□□ 2.46
PDPK1-204ENST00000441549 EIF4A1P60842 406 aaKnown RBP30.39■■■□□ 2.46
PDPK1-204ENST00000441549 BTBD11A6QL63 1104 aa30.39■■■□□ 2.45
PDPK1-204ENST00000441549 MEGF6O75095 1541 aa30.39■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms