RNA–Protein interactions for RNA: ENST00000440812.7

SMG7-205, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG7, Length 1,190 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-205ENST00000440812 NBPF6Q5VWK0 638 aa29.21■■■□□ 2.27
SMG7-205ENST00000440812 NBPF4Q96M43 638 aa29.21■■■□□ 2.27
SMG7-205ENST00000440812 TAF1LQ8IZX4 1826 aa29.2■■■□□ 2.26
SMG7-205ENST00000440812 CARD14Q9BXL6 1004 aa29.19■■■□□ 2.26
SMG7-205ENST00000440812 PCGF6Q9BYE7 350 aa29.19■■■□□ 2.26
SMG7-205ENST00000440812 CHD4Q14839 1912 aa29.19■■■□□ 2.26
SMG7-205ENST00000440812 COL24A1Q17RW2 1714 aa29.19■■■□□ 2.26
SMG7-205ENST00000440812 TOGARAM1Q9Y4F4 1720 aa29.19■■■□□ 2.26
SMG7-205ENST00000440812 NSD2O96028 1365 aa29.18■■■□□ 2.26
SMG7-205ENST00000440812 KCNQ4P56696 695 aa29.18■■■□□ 2.26
SMG7-205ENST00000440812 SYTL4Q96C24 671 aaPredicted RBP29.18■■■□□ 2.26
SMG7-205ENST00000440812 NSD3Q9BZ95 1437 aa29.18■■■□□ 2.26
SMG7-205ENST00000440812 PRIM1P49642 420 aaKnown RBP29.17■■■□□ 2.26
SMG7-205ENST00000440812 HSP90AB2PQ58FF8 381 aa29.17■■■□□ 2.26
SMG7-205ENST00000440812 ZCRB1Q8TBF4 217 aaKnown RBP29.17■■■□□ 2.26
SMG7-205ENST00000440812 PKD1L3Q7Z443 1732 aa29.16■■■□□ 2.26
SMG7-205ENST00000440812 UTRNP46939 3433 aa29.15■■■□□ 2.26
SMG7-205ENST00000440812 SMG6Q86US8 1419 aaKnown RBP29.14■■■□□ 2.26
SMG7-205ENST00000440812 CDCA8Q53HL2 280 aa29.14■■■□□ 2.26
SMG7-205ENST00000440812 MTFR1LQ9H019 292 aa29.14■■■□□ 2.26
SMG7-205ENST00000440812 C5P01031 1676 aa29.14■■■□□ 2.26
SMG7-205ENST00000440812 SGIP1Q9BQI5 828 aa29.13■■■□□ 2.25
SMG7-205ENST00000440812 INSRP06213 1382 aa29.12■■■□□ 2.25
SMG7-205ENST00000440812 YY1P25490 414 aa29.11■■■□□ 2.25
SMG7-205ENST00000440812 AKT1S1Q96B36 256 aa29.11■■■□□ 2.25
SMG7-205ENST00000440812 FLT4P35916 1363 aa29.11■■■□□ 2.25
SMG7-205ENST00000440812 FHDC1Q9C0D6 1143 aaPredicted RBP29.1■■■□□ 2.25
SMG7-205ENST00000440812 EMILIN1Q9Y6C2 1016 aa29.1■■■□□ 2.25
SMG7-205ENST00000440812 RAPGEF4Q8WZA2 1011 aa29.07■■■□□ 2.24
SMG7-205ENST00000440812 SLC27A3Q5K4L6 730 aa29.06■■■□□ 2.24
SMG7-205ENST00000440812 SYT17Q9BSW7 474 aa29.06■■■□□ 2.24
SMG7-205ENST00000440812 PNPLA7Q6ZV29 1317 aa29.05■■■□□ 2.24
SMG7-205ENST00000440812 TATP17735 454 aaPredicted RBP29.05■■■□□ 2.24
SMG7-205ENST00000440812 POLR3GLQ9BT43 218 aa29.05■■■□□ 2.24
SMG7-205ENST00000440812 TIMELESSQ9UNS1 1208 aa29.05■■■□□ 2.24
SMG7-205ENST00000440812 DCAF8L1A6NGE4 600 aa29.04■■■□□ 2.24
SMG7-205ENST00000440812 KIF24Q5T7B8 1368 aa29.03■■■□□ 2.24
SMG7-205ENST00000440812 PPM1GO15355 546 aaPredicted RBP29.03■■■□□ 2.24
SMG7-205ENST00000440812 CGNL1Q0VF96 1302 aa29.02■■■□□ 2.24
SMG7-205ENST00000440812 ARXQ96QS3 562 aa29.02■■■□□ 2.24
SMG7-205ENST00000440812 CLSPNQ9HAW4 1339 aa29■■■□□ 2.23
SMG7-205ENST00000440812 CCNL1Q9UK58 526 aaPredicted RBP29■■■□□ 2.23
SMG7-205ENST00000440812 TFCP2L1Q9NZI6 479 aa28.99■■■□□ 2.23
SMG7-205ENST00000440812 UBR3Q6ZT12 1888 aa28.99■■■□□ 2.23
SMG7-205ENST00000440812 GOLGB1Q14789 3259 aaKnown RBP28.98■■■□□ 2.23
SMG7-205ENST00000440812 PCDH11XQ9BZA7 1347 aa28.98■■■□□ 2.23
SMG7-205ENST00000440812 PCDH11YQ9BZA8 1340 aa28.98■■■□□ 2.23
SMG7-205ENST00000440812 NCAPD2Q15021 1401 aa28.98■■■□□ 2.23
SMG7-205ENST00000440812 CYP27B1O15528 508 aa28.98■■■□□ 2.23
SMG7-205ENST00000440812 C4BP0C0L5 1744 aa28.95■■■□□ 2.23
SMG7-205ENST00000440812 MPRIPQ6WCQ1 1025 aa28.94■■■□□ 2.22
SMG7-205ENST00000440812 KLHL34Q8N239 644 aa28.94■■■□□ 2.22
SMG7-205ENST00000440812 HSPA5P11021 654 aaKnown RBP28.93■■■□□ 2.22
SMG7-205ENST00000440812 TNNT2P45379 298 aaPredicted RBP28.93■■■□□ 2.22
SMG7-205ENST00000440812 SLC16A10Q8TF71 515 aa28.92■■■□□ 2.22
SMG7-205ENST00000440812 POLKQ9UBT6 870 aa28.92■■■□□ 2.22
SMG7-205ENST00000440812 WASHC2AQ641Q2 1341 aa28.92■■■□□ 2.22
SMG7-205ENST00000440812 EYA1Q99502 592 aa28.91■■■□□ 2.22
SMG7-205ENST00000440812 PALLDQ8WX93 1383 aa28.9■■■□□ 2.22
SMG7-205ENST00000440812 MAP3K5Q99683 1374 aa28.9■■■□□ 2.22
SMG7-205ENST00000440812 COL23A1Q86Y22 540 aaPredicted RBP28.9■■■□□ 2.22
SMG7-205ENST00000440812 VIRMAQ69YN4 1812 aaKnown RBP28.89■■■□□ 2.22
SMG7-205ENST00000440812 MSH5O43196 834 aa28.88■■■□□ 2.21
SMG7-205ENST00000440812 POLD1P28340 1107 aa28.87■■■□□ 2.21
SMG7-205ENST00000440812 EIF4G2P78344 907 aaKnown RBP eCLIP28.87■■■□□ 2.215e-7■■□□□ 11.4
SMG7-205ENST00000440812 MSL1Q68DK7 614 aa28.85■■■□□ 2.21
SMG7-205ENST00000440812 EIF4A2Q14240 407 aaKnown RBP28.84■■■□□ 2.21
SMG7-205ENST00000440812 CCER1Q8TC90 406 aaPredicted RBP28.84■■■□□ 2.21
SMG7-205ENST00000440812 PIGBQ92521 554 aa28.84■■■□□ 2.21
SMG7-205ENST00000440812 PANK3Q9H999 370 aa28.84■■■□□ 2.21
SMG7-205ENST00000440812 NLGN2Q8NFZ4 835 aa28.83■■■□□ 2.21
SMG7-205ENST00000440812 SMIM5Q71RC9 77 aa28.82■■■□□ 2.2
SMG7-205ENST00000440812 AMIGO3Q86WK7 504 aa28.82■■■□□ 2.2
SMG7-205ENST00000440812 SPG7Q9UQ90 795 aa28.82■■■□□ 2.2
SMG7-205ENST00000440812 NKX1-1Q15270 411 aaPredicted RBP28.81■■■□□ 2.2
SMG7-205ENST00000440812 GPR162Q16538 588 aa28.78■■■□□ 2.2
SMG7-205ENST00000440812 PELP1Q8IZL8 1130 aaKnown RBP28.78■■■□□ 2.2
SMG7-205ENST00000440812 COL5A3P25940 1745 aaPredicted RBP28.77■■■□□ 2.2
SMG7-205ENST00000440812 PHKG2P15735 406 aa28.77■■■□□ 2.2
SMG7-205ENST00000440812 ZNF784Q8NCA9 323 aaPredicted RBP28.77■■■□□ 2.2
SMG7-205ENST00000440812 SMARCC1Q92922 1105 aaPredicted RBP28.75■■■□□ 2.19
SMG7-205ENST00000440812 ASAP1Q9ULH1 1129 aa28.75■■■□□ 2.19
SMG7-205ENST00000440812 MYH14Q7Z406 1995 aaKnown RBP28.75■■■□□ 2.19
SMG7-205ENST00000440812 IFNL2Q8IZJ0 200 aa28.74■■■□□ 2.19
SMG7-205ENST00000440812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.74■■■□□ 2.196e-6■□□□□ 8.9
SMG7-205ENST00000440812 IGSF1Q8N6C5 1336 aa28.73■■■□□ 2.19
SMG7-205ENST00000440812 SCN11AQ9UI33 1791 aa28.73■■■□□ 2.19
SMG7-205ENST00000440812 PHF14O94880 888 aa28.73■■■□□ 2.19
SMG7-205ENST00000440812 TMOD3Q9NYL9 352 aa28.73■■■□□ 2.19
SMG7-205ENST00000440812 LINC00116Q8NCU8 138 aa28.72■■■□□ 2.19
SMG7-205ENST00000440812 AK7Q96M32 723 aa28.72■■■□□ 2.19
SMG7-205ENST00000440812 LOC102724428A0A0B4J2F2 783 aa28.71■■■□□ 2.19
SMG7-205ENST00000440812 SIK1P57059 783 aa28.71■■■□□ 2.19
SMG7-205ENST00000440812 ZNF831Q5JPB2 1677 aa28.7■■■□□ 2.19
SMG7-205ENST00000440812 ITPK1Q13572 414 aa28.7■■■□□ 2.18
SMG7-205ENST00000440812 YBX3P16989 372 aaKnown RBP eCLIP28.68■■■□□ 2.18
SMG7-205ENST00000440812 MORC1Q86VD1 984 aa28.68■■■□□ 2.18
SMG7-205ENST00000440812 ATG3Q9NT62 314 aa28.68■■■□□ 2.18
SMG7-205ENST00000440812 C4AP0C0L4 1744 aa28.68■■■□□ 2.18
SMG7-205ENST00000440812 AEBP1Q8IUX7 1158 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 364.6 ms