RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 LY75O60449 1722 aa18.46■□□□□ 0.55
SP4-203ENST00000440636 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
SP4-203ENST00000440636 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
SP4-203ENST00000440636 SYTL4Q96C24 671 aaPredicted RBP18.45■□□□□ 0.54
SP4-203ENST00000440636 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
SP4-203ENST00000440636 MEGF6O75095 1541 aa18.44■□□□□ 0.54
SP4-203ENST00000440636 POLD1P28340 1107 aa18.44■□□□□ 0.54
SP4-203ENST00000440636 TFCP2L1Q9NZI6 479 aa18.44■□□□□ 0.54
SP4-203ENST00000440636 ST20-MTHFSA0A0A6YYL1 179 aa18.43■□□□□ 0.54
SP4-203ENST00000440636 AMPHP49418 695 aa18.43■□□□□ 0.54
SP4-203ENST00000440636 GPR162Q16538 588 aa18.43■□□□□ 0.54
SP4-203ENST00000440636 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
SP4-203ENST00000440636 KLHL34Q8N239 644 aa18.42■□□□□ 0.54
SP4-203ENST00000440636 RTL1A6NKG5 1358 aa18.41■□□□□ 0.54
SP4-203ENST00000440636 C1QTNF8P60827 252 aa18.4■□□□□ 0.54
SP4-203ENST00000440636 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
SP4-203ENST00000440636 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.53
SP4-203ENST00000440636 NLGN2Q8NFZ4 835 aa18.39■□□□□ 0.53
SP4-203ENST00000440636 NBPF4Q96M43 638 aa18.39■□□□□ 0.53
SP4-203ENST00000440636 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
SP4-203ENST00000440636 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
SP4-203ENST00000440636 FYB1O15117 783 aa18.37■□□□□ 0.53
SP4-203ENST00000440636 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
SP4-203ENST00000440636 USP47Q96K76 1375 aa18.37■□□□□ 0.53
SP4-203ENST00000440636 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
SP4-203ENST00000440636 COL23A1Q86Y22 540 aaPredicted RBP18.36■□□□□ 0.53
SP4-203ENST00000440636 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
SP4-203ENST00000440636 USHBP1Q8N6Y0 703 aa18.36■□□□□ 0.53
SP4-203ENST00000440636 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
SP4-203ENST00000440636 RAPGEF4Q8WZA2 1011 aa18.34■□□□□ 0.53
SP4-203ENST00000440636 CEP350Q5VT06 3117 aa18.34■□□□□ 0.53
SP4-203ENST00000440636 SMG6Q86US8 1419 aaKnown RBP18.33■□□□□ 0.53
SP4-203ENST00000440636 INSRP06213 1382 aa18.32■□□□□ 0.52
SP4-203ENST00000440636 C5P01031 1676 aa18.32■□□□□ 0.52
SP4-203ENST00000440636 MSH5O43196 834 aa18.32■□□□□ 0.52
SP4-203ENST00000440636 YBX3P16989 372 aaKnown RBP eCLIP18.32■□□□□ 0.52
SP4-203ENST00000440636 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
SP4-203ENST00000440636 HSP90AB2PQ58FF8 381 aa18.32■□□□□ 0.52
SP4-203ENST00000440636 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
SP4-203ENST00000440636 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
SP4-203ENST00000440636 GIGYF1O75420 1035 aaPredicted RBP18.31■□□□□ 0.52
SP4-203ENST00000440636 GRIN3BO60391 1043 aa18.3■□□□□ 0.52
SP4-203ENST00000440636 TMF1P82094 1093 aa18.3■□□□□ 0.52
SP4-203ENST00000440636 MSL1Q68DK7 614 aa18.3■□□□□ 0.52
SP4-203ENST00000440636 FLT4P35916 1363 aa18.3■□□□□ 0.52
SP4-203ENST00000440636 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
SP4-203ENST00000440636 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
SP4-203ENST00000440636 TAF1LQ8IZX4 1826 aa18.29■□□□□ 0.52
SP4-203ENST00000440636 KIF20BQ96Q89 1820 aa18.29■□□□□ 0.52
SP4-203ENST00000440636 CYP27B1O15528 508 aa18.28■□□□□ 0.52
SP4-203ENST00000440636 TOGARAM1Q9Y4F4 1720 aa18.27■□□□□ 0.52
SP4-203ENST00000440636 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
SP4-203ENST00000440636 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
SP4-203ENST00000440636 FLAD1Q8NFF5 587 aa18.26■□□□□ 0.51
SP4-203ENST00000440636 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
SP4-203ENST00000440636 ITGB4P16144 1822 aa18.26■□□□□ 0.51
SP4-203ENST00000440636 C4BP0C0L5 1744 aa18.25■□□□□ 0.51
SP4-203ENST00000440636 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
SP4-203ENST00000440636 NCAPD2Q15021 1401 aa18.24■□□□□ 0.51
SP4-203ENST00000440636 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
SP4-203ENST00000440636 CARD14Q9BXL6 1004 aa18.24■□□□□ 0.51
SP4-203ENST00000440636 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
SP4-203ENST00000440636 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
SP4-203ENST00000440636 SMARCC1Q92922 1105 aaPredicted RBP18.23■□□□□ 0.51
SP4-203ENST00000440636 NKX1-1Q15270 411 aaPredicted RBP18.22■□□□□ 0.51
SP4-203ENST00000440636 PIGBQ92521 554 aa18.22■□□□□ 0.51
SP4-203ENST00000440636 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
SP4-203ENST00000440636 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
SP4-203ENST00000440636 AK7Q96M32 723 aa18.21■□□□□ 0.51
SP4-203ENST00000440636 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
SP4-203ENST00000440636 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
SP4-203ENST00000440636 ANKRD26Q9UPS8 1709 aa18.2■□□□□ 0.5
SP4-203ENST00000440636 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
SP4-203ENST00000440636 ADCY9O60503 1353 aa18.18■□□□□ 0.5
SP4-203ENST00000440636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.18■□□□□ 0.5
SP4-203ENST00000440636 PHF14O94880 888 aa18.18■□□□□ 0.5
SP4-203ENST00000440636 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
SP4-203ENST00000440636 SSFA2P28290 1259 aa18.17■□□□□ 0.5
SP4-203ENST00000440636 SIK1P57059 783 aa18.17■□□□□ 0.5
SP4-203ENST00000440636 LINC00116Q8NCU8 138 aa18.17■□□□□ 0.5
SP4-203ENST00000440636 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
SP4-203ENST00000440636 WASHC2AQ641Q2 1341 aa18.17■□□□□ 0.5
SP4-203ENST00000440636 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
SP4-203ENST00000440636 EYA1Q99502 592 aa18.16■□□□□ 0.5
SP4-203ENST00000440636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.16■□□□□ 0.5
SP4-203ENST00000440636 IGSF1Q8N6C5 1336 aa18.16■□□□□ 0.5
SP4-203ENST00000440636 ITPK1Q13572 414 aa18.14■□□□□ 0.49
SP4-203ENST00000440636 GPBP1L1Q9HC44 474 aaPredicted RBP18.14■□□□□ 0.49
SP4-203ENST00000440636 TMOD3Q9NYL9 352 aa18.14■□□□□ 0.49
SP4-203ENST00000440636 ASAP1Q9ULH1 1129 aa18.14■□□□□ 0.49
SP4-203ENST00000440636 PHKG2P15735 406 aa18.13■□□□□ 0.49
SP4-203ENST00000440636 IFNL2Q8IZJ0 200 aa18.12■□□□□ 0.49
SP4-203ENST00000440636 POLKQ9UBT6 870 aa18.12■□□□□ 0.49
SP4-203ENST00000440636 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
SP4-203ENST00000440636 GNPATO15228 680 aa18.11■□□□□ 0.49
SP4-203ENST00000440636 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
SP4-203ENST00000440636 ATG3Q9NT62 314 aa18.11■□□□□ 0.49
SP4-203ENST00000440636 ZNF526Q8TF50 670 aaPredicted RBP18.1■□□□□ 0.49
SP4-203ENST00000440636 PLEKHG2Q9H7P9 1386 aa18.09■□□□□ 0.49
SP4-203ENST00000440636 KDRP35968 1356 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms