RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 TFCP2L1Q9NZI6 479 aa20■□□□□ 0.79
PTPRN-205ENST00000440552 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
PTPRN-205ENST00000440552 AMPHP49418 695 aa19.99■□□□□ 0.79
PTPRN-205ENST00000440552 GPR162Q16538 588 aa19.99■□□□□ 0.79
PTPRN-205ENST00000440552 DOT1LQ8TEK3 1739 aa19.99■□□□□ 0.79
PTPRN-205ENST00000440552 TUBGCP6Q96RT7 1819 aa19.98■□□□□ 0.79
PTPRN-205ENST00000440552 SYTL4Q96C24 671 aaPredicted RBP19.98■□□□□ 0.79
PTPRN-205ENST00000440552 SHANK3Q9BYB0 1731 aa19.98■□□□□ 0.79
PTPRN-205ENST00000440552 CGNL1Q0VF96 1302 aa19.98■□□□□ 0.79
PTPRN-205ENST00000440552 MEGF6O75095 1541 aa19.97■□□□□ 0.79
PTPRN-205ENST00000440552 ST20-MTHFSA0A0A6YYL1 179 aa19.96■□□□□ 0.79
PTPRN-205ENST00000440552 C1QTNF8P60827 252 aa19.96■□□□□ 0.79
PTPRN-205ENST00000440552 RGPD2P0DJD1 1756 aa19.95■□□□□ 0.78
PTPRN-205ENST00000440552 KCNQ4P56696 695 aa19.95■□□□□ 0.78
PTPRN-205ENST00000440552 CCNL1Q9UK58 526 aaPredicted RBP19.95■□□□□ 0.78
PTPRN-205ENST00000440552 FBLN1P23142 703 aa19.94■□□□□ 0.78
PTPRN-205ENST00000440552 HMGB2P26583 209 aaKnown RBP19.93■□□□□ 0.78
PTPRN-205ENST00000440552 NBPF6Q5VWK0 638 aa19.93■□□□□ 0.78
PTPRN-205ENST00000440552 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
PTPRN-205ENST00000440552 NBPF4Q96M43 638 aa19.93■□□□□ 0.78
PTPRN-205ENST00000440552 USP47Q96K76 1375 aa19.93■□□□□ 0.78
PTPRN-205ENST00000440552 SENP3-EIF4A1A0A087X0R7 540 aa19.91■□□□□ 0.78
PTPRN-205ENST00000440552 FYB1O15117 783 aa19.91■□□□□ 0.78
PTPRN-205ENST00000440552 NLGN2Q8NFZ4 835 aa19.91■□□□□ 0.78
PTPRN-205ENST00000440552 COL23A1Q86Y22 540 aaPredicted RBP19.9■□□□□ 0.78
PTPRN-205ENST00000440552 RAPGEF4Q8WZA2 1011 aa19.9■□□□□ 0.78
PTPRN-205ENST00000440552 SMG6Q86US8 1419 aaKnown RBP19.9■□□□□ 0.78
PTPRN-205ENST00000440552 GRIN3BO60391 1043 aa19.89■□□□□ 0.77
PTPRN-205ENST00000440552 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
PTPRN-205ENST00000440552 KIF24Q5T7B8 1368 aa19.89■□□□□ 0.77
PTPRN-205ENST00000440552 INSRP06213 1382 aa19.88■□□□□ 0.77
PTPRN-205ENST00000440552 TATP17735 454 aaPredicted RBP19.88■□□□□ 0.77
PTPRN-205ENST00000440552 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
PTPRN-205ENST00000440552 GOLGB1Q14789 3259 aaKnown RBP19.87■□□□□ 0.77
PTPRN-205ENST00000440552 FLAD1Q8NFF5 587 aa19.87■□□□□ 0.77
PTPRN-205ENST00000440552 GGNBP2Q9H3C7 697 aa19.87■□□□□ 0.77
PTPRN-205ENST00000440552 PCDH11XQ9BZA7 1347 aa19.86■□□□□ 0.77
PTPRN-205ENST00000440552 PCDH11YQ9BZA8 1340 aa19.86■□□□□ 0.77
PTPRN-205ENST00000440552 MSH5O43196 834 aa19.86■□□□□ 0.77
PTPRN-205ENST00000440552 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
PTPRN-205ENST00000440552 TMF1P82094 1093 aa19.86■□□□□ 0.77
PTPRN-205ENST00000440552 USHBP1Q8N6Y0 703 aa19.86■□□□□ 0.77
PTPRN-205ENST00000440552 C5P01031 1676 aa19.84■□□□□ 0.77
PTPRN-205ENST00000440552 FLT4P35916 1363 aa19.84■□□□□ 0.77
PTPRN-205ENST00000440552 YBX3P16989 372 aaKnown RBP eCLIP19.84■□□□□ 0.77
PTPRN-205ENST00000440552 HSP90AB2PQ58FF8 381 aa19.84■□□□□ 0.77
PTPRN-205ENST00000440552 CD2APQ9Y5K6 639 aa19.84■□□□□ 0.77
PTPRN-205ENST00000440552 PALLDQ8WX93 1383 aa19.83■□□□□ 0.76
PTPRN-205ENST00000440552 TAF1LQ8IZX4 1826 aa19.82■□□□□ 0.76
PTPRN-205ENST00000440552 CDCA8Q53HL2 280 aa19.82■□□□□ 0.76
PTPRN-205ENST00000440552 CYP27B1O15528 508 aa19.81■□□□□ 0.76
PTPRN-205ENST00000440552 SMARCC1Q92922 1105 aaPredicted RBP19.81■□□□□ 0.76
PTPRN-205ENST00000440552 KIF20BQ96Q89 1820 aa19.81■□□□□ 0.76
PTPRN-205ENST00000440552 MSL1Q68DK7 614 aa19.8■□□□□ 0.76
PTPRN-205ENST00000440552 MPRIPQ6WCQ1 1025 aa19.8■□□□□ 0.76
PTPRN-205ENST00000440552 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
PTPRN-205ENST00000440552 NKX1-1Q15270 411 aaPredicted RBP19.78■□□□□ 0.76
PTPRN-205ENST00000440552 PKD1L3Q7Z443 1732 aa19.78■□□□□ 0.76
PTPRN-205ENST00000440552 ITGB4P16144 1822 aa19.78■□□□□ 0.76
PTPRN-205ENST00000440552 C4BP0C0L5 1744 aa19.77■□□□□ 0.76
PTPRN-205ENST00000440552 TOGARAM1Q9Y4F4 1720 aa19.77■□□□□ 0.76
PTPRN-205ENST00000440552 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
PTPRN-205ENST00000440552 PIGBQ92521 554 aa19.75■□□□□ 0.75
PTPRN-205ENST00000440552 AK7Q96M32 723 aa19.75■□□□□ 0.75
PTPRN-205ENST00000440552 CARD14Q9BXL6 1004 aa19.75■□□□□ 0.75
PTPRN-205ENST00000440552 ATP10DQ9P241 1426 aa19.75■□□□□ 0.75
PTPRN-205ENST00000440552 UBR3Q6ZT12 1888 aa19.74■□□□□ 0.75
PTPRN-205ENST00000440552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTPRN-205ENST00000440552 SPG7Q9UQ90 795 aa19.74■□□□□ 0.75
PTPRN-205ENST00000440552 EMILIN1Q9Y6C2 1016 aa19.74■□□□□ 0.75
PTPRN-205ENST00000440552 MAP2P11137 1827 aaKnown RBP19.73■□□□□ 0.75
PTPRN-205ENST00000440552 ANKRD26Q9UPS8 1709 aa19.73■□□□□ 0.75
PTPRN-205ENST00000440552 ADCY9O60503 1353 aa19.72■□□□□ 0.75
PTPRN-205ENST00000440552 SSFA2P28290 1259 aa19.72■□□□□ 0.75
PTPRN-205ENST00000440552 AMIGO3Q86WK7 504 aa19.72■□□□□ 0.75
PTPRN-205ENST00000440552 WASHC2AQ641Q2 1341 aa19.72■□□□□ 0.75
PTPRN-205ENST00000440552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
PTPRN-205ENST00000440552 LOC102724428A0A0B4J2F2 783 aa19.71■□□□□ 0.75
PTPRN-205ENST00000440552 SIK1P57059 783 aa19.71■□□□□ 0.75
PTPRN-205ENST00000440552 CEP350Q5VT06 3117 aa19.7■□□□□ 0.74
PTPRN-205ENST00000440552 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
PTPRN-205ENST00000440552 GPBP1L1Q9HC44 474 aaPredicted RBP19.69■□□□□ 0.74
PTPRN-205ENST00000440552 LINC00116Q8NCU8 138 aa19.68■□□□□ 0.74
PTPRN-205ENST00000440552 EYA1Q99502 592 aa19.68■□□□□ 0.74
PTPRN-205ENST00000440552 TMOD3Q9NYL9 352 aa19.68■□□□□ 0.74
PTPRN-205ENST00000440552 IGSF1Q8N6C5 1336 aa19.68■□□□□ 0.74
PTPRN-205ENST00000440552 PHF14O94880 888 aa19.67■□□□□ 0.74
PTPRN-205ENST00000440552 PPM1GO15355 546 aaPredicted RBP19.66■□□□□ 0.74
PTPRN-205ENST00000440552 IFNL2Q8IZJ0 200 aa19.66■□□□□ 0.74
PTPRN-205ENST00000440552 PHKG2P15735 406 aa19.65■□□□□ 0.74
PTPRN-205ENST00000440552 ITPK1Q13572 414 aa19.65■□□□□ 0.74
PTPRN-205ENST00000440552 SMIM5Q71RC9 77 aa19.65■□□□□ 0.74
PTPRN-205ENST00000440552 ASAP1Q9ULH1 1129 aa19.65■□□□□ 0.74
PTPRN-205ENST00000440552 POLKQ9UBT6 870 aa19.64■□□□□ 0.73
PTPRN-205ENST00000440552 GNPATO15228 680 aa19.63■□□□□ 0.73
PTPRN-205ENST00000440552 ATP6V1AP38606 617 aa19.63■□□□□ 0.73
PTPRN-205ENST00000440552 ATG3Q9NT62 314 aa19.63■□□□□ 0.73
PTPRN-205ENST00000440552 IFFO2Q5TF58 517 aa19.62■□□□□ 0.73
PTPRN-205ENST00000440552 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
PTPRN-205ENST00000440552 CICQ96RK0 1608 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms