RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 FAM208AQ9UK61 1670 aaKnown RBP24.81■■□□□ 1.56
HDAC7-213ENST00000440293 BTAF1O14981 1849 aa24.79■■□□□ 1.56
HDAC7-213ENST00000440293 HMGB2P26583 209 aaKnown RBP24.79■■□□□ 1.56
HDAC7-213ENST00000440293 ZNF827Q17R98 1081 aa24.79■■□□□ 1.56
HDAC7-213ENST00000440293 DDX54Q8TDD1 881 aaKnown RBP24.79■■□□□ 1.56
HDAC7-213ENST00000440293 FBLN1P23142 703 aa24.78■■□□□ 1.56
HDAC7-213ENST00000440293 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
HDAC7-213ENST00000440293 ZNF784Q8NCA9 323 aaPredicted RBP24.78■■□□□ 1.56
HDAC7-213ENST00000440293 UTRNP46939 3433 aa24.77■■□□□ 1.56
HDAC7-213ENST00000440293 HOXC9P31274 260 aa24.77■■□□□ 1.56
HDAC7-213ENST00000440293 AMPHP49418 695 aa24.76■■□□□ 1.55
HDAC7-213ENST00000440293 KNSTRNQ9Y448 316 aa24.76■■□□□ 1.55
HDAC7-213ENST00000440293 MAP3K19Q56UN5 1328 aa24.76■■□□□ 1.55
HDAC7-213ENST00000440293 WASHC2AQ641Q2 1341 aa24.76■■□□□ 1.55
HDAC7-213ENST00000440293 ZCRB1Q8TBF4 217 aaKnown RBP24.75■■□□□ 1.55
HDAC7-213ENST00000440293 RTL1A6NKG5 1358 aa24.75■■□□□ 1.55
HDAC7-213ENST00000440293 POLD1P28340 1107 aa24.74■■□□□ 1.55
HDAC7-213ENST00000440293 PRIM1P49642 420 aaKnown RBP24.73■■□□□ 1.55
HDAC7-213ENST00000440293 LTV1Q96GA3 475 aaPredicted RBP24.73■■□□□ 1.55
HDAC7-213ENST00000440293 QSER1Q2KHR3 1735 aa24.72■■□□□ 1.55
HDAC7-213ENST00000440293 RRS1Q15050 365 aaKnown RBP24.72■■□□□ 1.55
HDAC7-213ENST00000440293 TFCP2L1Q9NZI6 479 aa24.71■■□□□ 1.55
HDAC7-213ENST00000440293 PNPLA7Q6ZV29 1317 aa24.7■■□□□ 1.54
HDAC7-213ENST00000440293 SYTL4Q96C24 671 aaPredicted RBP24.69■■□□□ 1.54
HDAC7-213ENST00000440293 NSD2O96028 1365 aa24.67■■□□□ 1.54
HDAC7-213ENST00000440293 COL24A1Q17RW2 1714 aa24.67■■□□□ 1.54
HDAC7-213ENST00000440293 PER1O15534 1290 aaPredicted RBP24.67■■□□□ 1.54
HDAC7-213ENST00000440293 GPR162Q16538 588 aa24.67■■□□□ 1.54
HDAC7-213ENST00000440293 KIF24Q5T7B8 1368 aa24.67■■□□□ 1.54
HDAC7-213ENST00000440293 MORC1Q86VD1 984 aa24.66■■□□□ 1.54
HDAC7-213ENST00000440293 KAT6BQ8WYB5 2073 aa24.66■■□□□ 1.54
HDAC7-213ENST00000440293 CHD4Q14839 1912 aa24.65■■□□□ 1.54
HDAC7-213ENST00000440293 NBPF6Q5VWK0 638 aa24.65■■□□□ 1.54
HDAC7-213ENST00000440293 SMG6Q86US8 1419 aaKnown RBP24.65■■□□□ 1.54
HDAC7-213ENST00000440293 NBPF4Q96M43 638 aa24.65■■□□□ 1.54
HDAC7-213ENST00000440293 KIF20BQ96Q89 1820 aa24.65■■□□□ 1.54
HDAC7-213ENST00000440293 TNNT2P45379 298 aaPredicted RBP24.64■■□□□ 1.54
HDAC7-213ENST00000440293 AMER1Q5JTC6 1135 aaPredicted RBP24.64■■□□□ 1.54
HDAC7-213ENST00000440293 RAPGEF4Q8WZA2 1011 aa24.64■■□□□ 1.54
HDAC7-213ENST00000440293 CCNL1Q9UK58 526 aaPredicted RBP24.64■■□□□ 1.54
HDAC7-213ENST00000440293 MEGF6O75095 1541 aa24.63■■□□□ 1.53
HDAC7-213ENST00000440293 EMILIN1Q9Y6C2 1016 aa24.63■■□□□ 1.53
HDAC7-213ENST00000440293 LY75O60449 1722 aa24.63■■□□□ 1.53
HDAC7-213ENST00000440293 PPM1GO15355 546 aaPredicted RBP24.62■■□□□ 1.53
HDAC7-213ENST00000440293 HSP90AB2PQ58FF8 381 aa24.62■■□□□ 1.53
HDAC7-213ENST00000440293 POLKQ9UBT6 870 aa24.62■■□□□ 1.53
HDAC7-213ENST00000440293 INSRP06213 1382 aa24.61■■□□□ 1.53
HDAC7-213ENST00000440293 FLT4P35916 1363 aa24.6■■□□□ 1.53
HDAC7-213ENST00000440293 TATP17735 454 aaPredicted RBP24.6■■□□□ 1.53
HDAC7-213ENST00000440293 FLAD1Q8NFF5 587 aa24.6■■□□□ 1.53
HDAC7-213ENST00000440293 DOT1LQ8TEK3 1739 aa24.59■■□□□ 1.53
HDAC7-213ENST00000440293 C1QTNF8P60827 252 aa24.59■■□□□ 1.53
HDAC7-213ENST00000440293 PCDH11XQ9BZA7 1347 aa24.59■■□□□ 1.53
HDAC7-213ENST00000440293 PCDH11YQ9BZA8 1340 aa24.59■■□□□ 1.53
HDAC7-213ENST00000440293 GRIN3BO60391 1043 aa24.58■■□□□ 1.53
HDAC7-213ENST00000440293 KCNQ4P56696 695 aa24.58■■□□□ 1.53
HDAC7-213ENST00000440293 SHANK3Q9BYB0 1731 aa24.58■■□□□ 1.52
HDAC7-213ENST00000440293 CC2D1BQ5T0F9 858 aaKnown RBP24.56■■□□□ 1.52
HDAC7-213ENST00000440293 COL23A1Q86Y22 540 aaPredicted RBP24.56■■□□□ 1.52
HDAC7-213ENST00000440293 KLHL34Q8N239 644 aa24.55■■□□□ 1.52
HDAC7-213ENST00000440293 SMARCC1Q92922 1105 aaPredicted RBP24.53■■□□□ 1.52
HDAC7-213ENST00000440293 NPC1L1Q9UHC9 1359 aa24.53■■□□□ 1.52
HDAC7-213ENST00000440293 RGPD2P0DJD1 1756 aa24.52■■□□□ 1.52
HDAC7-213ENST00000440293 USHBP1Q8N6Y0 703 aa24.52■■□□□ 1.52
HDAC7-213ENST00000440293 NLGN2Q8NFZ4 835 aa24.52■■□□□ 1.52
HDAC7-213ENST00000440293 CD2APQ9Y5K6 639 aa24.52■■□□□ 1.52
HDAC7-213ENST00000440293 MSH5O43196 834 aa24.51■■□□□ 1.51
HDAC7-213ENST00000440293 TUBGCP6Q96RT7 1819 aa24.51■■□□□ 1.51
HDAC7-213ENST00000440293 GOLGB1Q14789 3259 aaKnown RBP24.51■■□□□ 1.51
HDAC7-213ENST00000440293 CNGB1Q14028 1251 aaPredicted RBP24.5■■□□□ 1.51
HDAC7-213ENST00000440293 NKX1-1Q15270 411 aaPredicted RBP24.5■■□□□ 1.51
HDAC7-213ENST00000440293 PALLDQ8WX93 1383 aa24.5■■□□□ 1.51
HDAC7-213ENST00000440293 PELP1Q8IZL8 1130 aaKnown RBP24.49■■□□□ 1.51
HDAC7-213ENST00000440293 SENP3-EIF4A1A0A087X0R7 540 aa24.48■■□□□ 1.51
HDAC7-213ENST00000440293 CYP27B1O15528 508 aa24.48■■□□□ 1.51
HDAC7-213ENST00000440293 GIGYF1O75420 1035 aaPredicted RBP24.48■■□□□ 1.51
HDAC7-213ENST00000440293 ANKRD26Q9UPS8 1709 aa24.48■■□□□ 1.51
HDAC7-213ENST00000440293 NCAPD2Q15021 1401 aa24.47■■□□□ 1.51
HDAC7-213ENST00000440293 MPRIPQ6WCQ1 1025 aa24.47■■□□□ 1.51
HDAC7-213ENST00000440293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.47■■□□□ 1.51
HDAC7-213ENST00000440293 EIF4A2Q14240 407 aaKnown RBP24.46■■□□□ 1.51
HDAC7-213ENST00000440293 MAP2P11137 1827 aaKnown RBP24.46■■□□□ 1.51
HDAC7-213ENST00000440293 MTHFSP49914 203 aa24.45■■□□□ 1.5
HDAC7-213ENST00000440293 EYA1Q99502 592 aa24.45■■□□□ 1.5
HDAC7-213ENST00000440293 SPG7Q9UQ90 795 aa24.45■■□□□ 1.5
HDAC7-213ENST00000440293 YBX3P16989 372 aaKnown RBP eCLIP24.44■■□□□ 1.5
HDAC7-213ENST00000440293 C5P01031 1676 aa24.43■■□□□ 1.5
HDAC7-213ENST00000440293 PLEKHG2Q9H7P9 1386 aa24.43■■□□□ 1.5
HDAC7-213ENST00000440293 AK7Q96M32 723 aa24.42■■□□□ 1.5
HDAC7-213ENST00000440293 DDX10Q13206 875 aaKnown RBP24.41■■□□□ 1.5
HDAC7-213ENST00000440293 PIGBQ92521 554 aa24.41■■□□□ 1.5
HDAC7-213ENST00000440293 SSFA2P28290 1259 aa24.4■■□□□ 1.5
HDAC7-213ENST00000440293 MSL1Q68DK7 614 aa24.4■■□□□ 1.5
HDAC7-213ENST00000440293 PKD1L3Q7Z443 1732 aa24.39■■□□□ 1.5
HDAC7-213ENST00000440293 TAF1LQ8IZX4 1826 aa24.38■■□□□ 1.49
HDAC7-213ENST00000440293 C4BP0C0L5 1744 aa24.37■■□□□ 1.49
HDAC7-213ENST00000440293 LOC102724428A0A0B4J2F2 783 aa24.36■■□□□ 1.49
HDAC7-213ENST00000440293 IL13P35225 146 aa24.36■■□□□ 1.49
HDAC7-213ENST00000440293 SIK1P57059 783 aa24.36■■□□□ 1.49
HDAC7-213ENST00000440293 IFNL2Q8IZJ0 200 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms