RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ABL2P42684 1182 aa6.51□□□□□ -1.37
HMGB3P11-201ENST00000440127 PTSQ03393 145 aa6.51□□□□□ -1.37
HMGB3P11-201ENST00000440127 MCM6Q14566 821 aa6.51□□□□□ -1.37
HMGB3P11-201ENST00000440127 LYSMD3Q7Z3D4 306 aa6.51□□□□□ -1.37
HMGB3P11-201ENST00000440127 RNF217Q8TC41 542 aa6.51□□□□□ -1.37
HMGB3P11-201ENST00000440127 ZNF395Q9H8N7 513 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P11-201ENST00000440127 FIGNL2A6NMB9 653 aa6.5□□□□□ -1.37
HMGB3P11-201ENST00000440127 CTSOP43234 321 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P11-201ENST00000440127 RNF144AP50876 292 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P11-201ENST00000440127 RNF135Q8IUD6 432 aa6.5□□□□□ -1.37
HMGB3P11-201ENST00000440127 CEP126Q9P2H0 1117 aa6.5□□□□□ -1.37
HMGB3P11-201ENST00000440127 DOLKQ9UPQ8 538 aa6.5□□□□□ -1.37
HMGB3P11-201ENST00000440127 MEN1O00255 615 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 GPR37L1O60883 481 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 GNRH1P01148 92 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 SEMA3FQ13275 785 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 ESCO1Q5FWF5 840 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 SLC27A3Q5K4L6 730 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 CCDC155Q8N6L0 562 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 GMCL1Q96IK5 515 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 GDPD2Q9HCC8 539 aa6.49□□□□□ -1.37
HMGB3P11-201ENST00000440127 ADD1P35611 737 aaKnown RBP6.48□□□□□ -1.37
HMGB3P11-201ENST00000440127 USP4Q13107 963 aa6.48□□□□□ -1.37
HMGB3P11-201ENST00000440127 CLN3Q13286 438 aa6.48□□□□□ -1.37
HMGB3P11-201ENST00000440127 MAP7D1Q3KQU3 841 aa6.48□□□□□ -1.37
HMGB3P11-201ENST00000440127 FOXR1Q6PIV2 292 aa6.48□□□□□ -1.37
HMGB3P11-201ENST00000440127 ERBB4Q15303 1308 aa6.48□□□□□ -1.37
HMGB3P11-201ENST00000440127 ITGA6P23229 1130 aa6.47□□□□□ -1.37
HMGB3P11-201ENST00000440127 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P11-201ENST00000440127 NANOS1Q8WY41 292 aaKnown RBP6.47□□□□□ -1.37
HMGB3P11-201ENST00000440127 A0A1W2PRU2 124 aa6.46□□□□□ -1.38
HMGB3P11-201ENST00000440127 SLC35F4A4IF30 521 aa6.46□□□□□ -1.38
HMGB3P11-201ENST00000440127 UBTFP17480 764 aaKnown RBP6.46□□□□□ -1.38
HMGB3P11-201ENST00000440127 TMEM132AQ24JP5 1023 aa6.46□□□□□ -1.38
HMGB3P11-201ENST00000440127 WDR44Q5JSH3 913 aa6.46□□□□□ -1.38
HMGB3P11-201ENST00000440127 FOXD4L5Q5VV16 416 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P11-201ENST00000440127 SV2AQ7L0J3 742 aa6.46□□□□□ -1.38
HMGB3P11-201ENST00000440127 CDC14CA4D256 554 aa6.45□□□□□ -1.38
HMGB3P11-201ENST00000440127 H7C1W4 665 aa6.45□□□□□ -1.38
HMGB3P11-201ENST00000440127 TRAK2O60296 914 aa6.45□□□□□ -1.38
HMGB3P11-201ENST00000440127 VAC14Q08AM6 782 aa6.45□□□□□ -1.38
HMGB3P11-201ENST00000440127 IRF5Q13568 498 aa6.45□□□□□ -1.38
HMGB3P11-201ENST00000440127 GNASQ5JWF2 1037 aa6.45□□□□□ -1.38
HMGB3P11-201ENST00000440127 TAS1R3Q7RTX0 852 aa6.44□□□□□ -1.38
HMGB3P11-201ENST00000440127 OSBPL3Q9H4L5 887 aa6.44□□□□□ -1.38
HMGB3P11-201ENST00000440127 ARHGEF10LQ9HCE6 1279 aa6.44□□□□□ -1.38
HMGB3P11-201ENST00000440127 LZTS3O60299 673 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P11-201ENST00000440127 SCTRP47872 440 aa6.43□□□□□ -1.38
HMGB3P11-201ENST00000440127 OXLD1Q5BKU9 147 aa6.43□□□□□ -1.38
HMGB3P11-201ENST00000440127 PRICKLE2Q7Z3G6 844 aa6.43□□□□□ -1.38
HMGB3P11-201ENST00000440127 KDF1Q8NAX2 398 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P11-201ENST00000440127 ESYT1Q9BSJ8 1104 aa6.43□□□□□ -1.38
HMGB3P11-201ENST00000440127 COG6Q9Y2V7 657 aa6.43□□□□□ -1.38
HMGB3P11-201ENST00000440127 DYRK1BQ9Y463 629 aa6.43□□□□□ -1.38
HMGB3P11-201ENST00000440127 SPATA31C2B4DYI2 1134 aa6.42□□□□□ -1.38
HMGB3P11-201ENST00000440127 NFATC2IPQ8NCF5 419 aa6.42□□□□□ -1.38
HMGB3P11-201ENST00000440127 CNKSR1Q969H4 720 aa6.42□□□□□ -1.38
HMGB3P11-201ENST00000440127 TRERF1Q96PN7 1200 aa6.42□□□□□ -1.38
HMGB3P11-201ENST00000440127 CCDC85AQ96PX6 553 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P11-201ENST00000440127 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 WASLO00401 505 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 EML3Q32P44 896 aa6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 TMEM214Q6NUQ4 689 aaKnown RBP6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 TRIM22Q8IYM9 498 aa6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 NBPF15Q8N660 670 aa6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 PLPP7Q8NBV4 271 aa6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 ZSCAN10Q96SZ4 725 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 GRIP2Q9C0E4 1043 aa6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 NSFL1CQ9UNZ2 370 aaKnown RBP6.41□□□□□ -1.38
HMGB3P11-201ENST00000440127 RNF225M0QZC1 329 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P11-201ENST00000440127 NBPF10Q6P3W6 841 aaKnown RBP6.4□□□□□ -1.38
HMGB3P11-201ENST00000440127 RIPOR1Q6ZS17 1223 aa6.4□□□□□ -1.38
HMGB3P11-201ENST00000440127 VWA5B2Q8N398 1253 aa6.4□□□□□ -1.38
HMGB3P11-201ENST00000440127 TIMMDC1Q9NPL8 285 aa6.4□□□□□ -1.38
HMGB3P11-201ENST00000440127 CHIC2Q9UKJ5 165 aa6.4□□□□□ -1.38
HMGB3P11-201ENST00000440127 SENP3-EIF4A1A0A087X0R7 540 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 A0A1B0GTH6 734 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 CSB-PGBD3P0DP91 1061 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 RHOQP17081 205 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 LBRQ14739 615 aaKnown RBP6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 TLR1Q15399 786 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 PGBD3Q8N328 593 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 PHTF2Q8N3S3 785 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 XAGE2Q96GT9 111 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 COL25A1Q9BXS0 654 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 RAB6BQ9NRW1 208 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 PHF24Q9UPV7 400 aa6.39□□□□□ -1.39
HMGB3P11-201ENST00000440127 F11P03951 625 aa6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 CENPCQ03188 943 aa6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 POU4F2Q12837 409 aa6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 SUZ12Q15022 739 aaKnown RBP6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 TRIM50Q86XT4 487 aa6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 RHBDD1Q8TEB9 315 aa6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 CNTNAP3BQ96NU0 1288 aa6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 GAS2L1Q99501 681 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 CDCA7Q9BWT1 371 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 CNTNAP3Q9BZ76 1288 aa6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 NOD1Q9Y239 953 aa6.38□□□□□ -1.39
HMGB3P11-201ENST00000440127 BACH1O14867 736 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms