RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
APTR-204ENST00000440088 FAM208AQ9UK61 1670 aaKnown RBP25.4■■□□□ 1.66
APTR-204ENST00000440088 MAP3K5Q99683 1374 aa25.4■■□□□ 1.66
APTR-204ENST00000440088 TOM1O60784 492 aa25.39■■□□□ 1.65
APTR-204ENST00000440088 CSB-PGBD3P0DP91 1061 aa25.39■■□□□ 1.65
APTR-204ENST00000440088 NLRP2Q9NX02 1062 aa25.39■■□□□ 1.65
APTR-204ENST00000440088 AMOTQ4VCS5 1084 aa25.38■■□□□ 1.65
APTR-204ENST00000440088 PLEKHO1Q53GL0 409 aaPredicted RBP25.37■■□□□ 1.65
APTR-204ENST00000440088 CRB1P82279 1406 aa25.37■■□□□ 1.65
APTR-204ENST00000440088 EXOC6Q8TAG9 804 aa25.36■■□□□ 1.65
APTR-204ENST00000440088 CHL1O00533 1208 aa25.36■■□□□ 1.65
APTR-204ENST00000440088 C20orf194Q5TEA3 1177 aa25.36■■□□□ 1.65
APTR-204ENST00000440088 ZNF428Q96B54 188 aa25.36■■□□□ 1.65
APTR-204ENST00000440088 CANXP27824 592 aaKnown RBP25.35■■□□□ 1.65
APTR-204ENST00000440088 BCL2L13Q9BXK5 485 aa25.34■■□□□ 1.65
APTR-204ENST00000440088 LRRC37A3O60309 1634 aa25.33■■□□□ 1.65
APTR-204ENST00000440088 RAPGEF4Q8WZA2 1011 aa25.33■■□□□ 1.65
APTR-204ENST00000440088 ZNF530Q6P9A1 599 aaPredicted RBP25.32■■□□□ 1.64
APTR-204ENST00000440088 FRAT1Q92837 279 aaPredicted RBP25.32■■□□□ 1.64
APTR-204ENST00000440088 CRBNQ96SW2 442 aa25.32■■□□□ 1.64
APTR-204ENST00000440088 SMC4Q9NTJ3 1288 aa25.32■■□□□ 1.64
APTR-204ENST00000440088 AKAP4Q5JQC9 854 aa25.31■■□□□ 1.64
APTR-204ENST00000440088 IL17REQ8NFR9 667 aa25.31■■□□□ 1.64
APTR-204ENST00000440088 COL22A1Q8NFW1 1626 aaPredicted RBP25.31■■□□□ 1.64
APTR-204ENST00000440088 PHLPP1O60346 1717 aa25.31■■□□□ 1.64
APTR-204ENST00000440088 PDE3AQ14432 1141 aa25.3■■□□□ 1.64
APTR-204ENST00000440088 ALDH1L2Q3SY69 923 aa25.3■■□□□ 1.64
APTR-204ENST00000440088 SSH1Q8WYL5 1049 aa25.3■■□□□ 1.64
APTR-204ENST00000440088 WDR17Q8IZU2 1322 aa25.3■■□□□ 1.64
APTR-204ENST00000440088 B4GALNT3Q6L9W6 998 aa25.3■■□□□ 1.64
APTR-204ENST00000440088 PLEKHG2Q9H7P9 1386 aa25.3■■□□□ 1.64
APTR-204ENST00000440088 COL5A2P05997 1499 aaPredicted RBP25.3■■□□□ 1.64
APTR-204ENST00000440088 VAMP4O75379 141 aa25.29■■□□□ 1.64
APTR-204ENST00000440088 PIP4K2BP78356 416 aa25.29■■□□□ 1.64
APTR-204ENST00000440088 TWISTNBQ3B726 338 aaPredicted RBP25.29■■□□□ 1.64
APTR-204ENST00000440088 C1orf141Q5JVX7 400 aa25.29■■□□□ 1.64
APTR-204ENST00000440088 TATP17735 454 aaPredicted RBP25.29■■□□□ 1.64
APTR-204ENST00000440088 TSPYL6Q8N831 410 aa25.29■■□□□ 1.64
APTR-204ENST00000440088 CEMIPQ8WUJ3 1361 aa25.28■■□□□ 1.64
APTR-204ENST00000440088 TSPYL4Q9UJ04 414 aa25.28■■□□□ 1.64
APTR-204ENST00000440088 COL16A1Q07092 1604 aaPredicted RBP25.28■■□□□ 1.64
APTR-204ENST00000440088 C8orf58Q8NAV2 365 aa25.27■■□□□ 1.64
APTR-204ENST00000440088 CCDC136Q96JN2 1154 aa25.27■■□□□ 1.64
APTR-204ENST00000440088 ELL2O00472 640 aaPredicted RBP25.27■■□□□ 1.64
APTR-204ENST00000440088 UBAP1LF5GYI3 381 aa25.26■■□□□ 1.63
APTR-204ENST00000440088 TOM1L2Q6ZVM7 507 aa25.25■■□□□ 1.63
APTR-204ENST00000440088 PELP1Q8IZL8 1130 aaKnown RBP25.25■■□□□ 1.63
APTR-204ENST00000440088 BABAM1Q9NWV8 329 aa25.25■■□□□ 1.63
APTR-204ENST00000440088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.25■■□□□ 1.636e-6■□□□□ 8.9
APTR-204ENST00000440088 MEGF6O75095 1541 aa25.25■■□□□ 1.63
APTR-204ENST00000440088 TAF7Q15545 349 aaPredicted RBP25.25■■□□□ 1.63
APTR-204ENST00000440088 MIS18AQ9NYP9 233 aa25.25■■□□□ 1.63
APTR-204ENST00000440088 KIF16BQ96L93 1317 aa25.25■■□□□ 1.63
APTR-204ENST00000440088 ZKSCAN2Q63HK3 967 aa25.24■■□□□ 1.63
APTR-204ENST00000440088 BRPF1P55201 1214 aaPredicted RBP25.24■■□□□ 1.63
APTR-204ENST00000440088 SPG7Q9UQ90 795 aa25.24■■□□□ 1.63
APTR-204ENST00000440088 EVA1CP58658 441 aa25.23■■□□□ 1.63
APTR-204ENST00000440088 LGR6Q9HBX8 967 aa25.22■■□□□ 1.63
APTR-204ENST00000440088 MS4A1P11836 297 aa25.22■■□□□ 1.63
APTR-204ENST00000440088 OVOS2A0A0G2JMS6 1433 aa25.22■■□□□ 1.63
APTR-204ENST00000440088 MPRIPQ6WCQ1 1025 aa25.21■■□□□ 1.63
APTR-204ENST00000440088 STRN4Q9NRL3 753 aa25.21■■□□□ 1.63
APTR-204ENST00000440088 COL14A1Q05707 1796 aaKnown RBP25.21■■□□□ 1.63
APTR-204ENST00000440088 PANK1Q8TE04 598 aa25.2■■□□□ 1.63
APTR-204ENST00000440088 CARD10Q9BWT7 1032 aa25.2■■□□□ 1.63
APTR-204ENST00000440088 IPO8O15397 1037 aaKnown RBP25.2■■□□□ 1.62
APTR-204ENST00000440088 RNMTO43148 476 aaKnown RBP25.2■■□□□ 1.62
APTR-204ENST00000440088 TEFQ10587 303 aa25.2■■□□□ 1.62
APTR-204ENST00000440088 KRT24Q2M2I5 525 aa25.2■■□□□ 1.62
APTR-204ENST00000440088 NOB1Q9ULX3 412 aaKnown RBP25.19■■□□□ 1.62
APTR-204ENST00000440088 VIRMAQ69YN4 1812 aaKnown RBP25.19■■□□□ 1.62
APTR-204ENST00000440088 ATF7IPQ6VMQ6 1270 aa25.19■■□□□ 1.62
APTR-204ENST00000440088 BTG4Q9NY30 223 aa25.19■■□□□ 1.62
APTR-204ENST00000440088 PKD1L3Q7Z443 1732 aa25.18■■□□□ 1.62
APTR-204ENST00000440088 LARP1Q6PKG0 1096 aaKnown RBP25.18■■□□□ 1.62
APTR-204ENST00000440088 FTSJ3Q8IY81 847 aaKnown RBP25.18■■□□□ 1.62
APTR-204ENST00000440088 MRPL50Q8N5N7 158 aaKnown RBP25.17■■□□□ 1.62
APTR-204ENST00000440088 PARP4Q9UKK3 1724 aaKnown RBP25.17■■□□□ 1.62
APTR-204ENST00000440088 TRIM27P14373 513 aa25.17■■□□□ 1.62
APTR-204ENST00000440088 DZIP1LQ8IYY4 767 aaKnown RBP25.17■■□□□ 1.62
APTR-204ENST00000440088 CLUAP1Q96AJ1 413 aa25.17■■□□□ 1.62
APTR-204ENST00000440088 COG6Q9Y2V7 657 aa25.17■■□□□ 1.62
APTR-204ENST00000440088 RLBP1P12271 317 aa25.16■■□□□ 1.62
APTR-204ENST00000440088 PHKG2P15735 406 aa25.16■■□□□ 1.62
APTR-204ENST00000440088 IFNL2Q8IZJ0 200 aa25.16■■□□□ 1.62
APTR-204ENST00000440088 TNNQ9UQP3 1299 aa25.16■■□□□ 1.62
APTR-204ENST00000440088 ADAMTS7Q9UKP4 1686 aa25.16■■□□□ 1.62
APTR-204ENST00000440088 CERKQ8TCT0 537 aa25.13■■□□□ 1.61
APTR-204ENST00000440088 ARHGAP45Q92619 1136 aa25.13■■□□□ 1.61
APTR-204ENST00000440088 SOS1Q07889 1333 aaPredicted RBP25.13■■□□□ 1.61
APTR-204ENST00000440088 IL2RBP14784 551 aa25.13■■□□□ 1.61
APTR-204ENST00000440088 TCERG1O14776 1098 aaKnown RBP25.12■■□□□ 1.61
APTR-204ENST00000440088 BTBD11A6QL63 1104 aa25.12■■□□□ 1.61
APTR-204ENST00000440088 CYP27B1O15528 508 aa25.12■■□□□ 1.61
APTR-204ENST00000440088 KDM3BQ7LBC6 1761 aa25.11■■□□□ 1.61
APTR-204ENST00000440088 SCN11AQ9UI33 1791 aa25.11■■□□□ 1.61
APTR-204ENST00000440088 HSP90AB1P08238 724 aaKnown RBP25.11■■□□□ 1.61
APTR-204ENST00000440088 AAMPQ13685 434 aa25.11■■□□□ 1.61
APTR-204ENST00000440088 MVPQ14764 893 aaKnown RBP25.1■■□□□ 1.61
APTR-204ENST00000440088 ZCRB1Q8TBF4 217 aaKnown RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms