RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PNISRQ8TF01 805 aaKnown RBP19.38■□□□□ 0.69
TNFRSF1A-204ENST00000440083 OVOS2A0A0G2JMS6 1433 aa19.37■□□□□ 0.69
TNFRSF1A-204ENST00000440083 EP400Q96L91 3159 aa19.37■□□□□ 0.69
TNFRSF1A-204ENST00000440083 SHANK3Q9BYB0 1731 aa19.37■□□□□ 0.69
TNFRSF1A-204ENST00000440083 ZBED9Q6R2W3 1325 aa19.36■□□□□ 0.69
TNFRSF1A-204ENST00000440083 IGSF1Q8N6C5 1336 aa19.36■□□□□ 0.69
TNFRSF1A-204ENST00000440083 AEBP1Q8IUX7 1158 aa19.36■□□□□ 0.69
TNFRSF1A-204ENST00000440083 MARCH10Q8NA82 808 aaPredicted RBP19.36■□□□□ 0.69
TNFRSF1A-204ENST00000440083 UPF1Q92900 1129 aaKnown RBP eCLIP19.36■□□□□ 0.69
TNFRSF1A-204ENST00000440083 EXOC5O00471 708 aa19.34■□□□□ 0.69
TNFRSF1A-204ENST00000440083 RAPGEF4Q8WZA2 1011 aa19.34■□□□□ 0.69
TNFRSF1A-204ENST00000440083 DIAPH1O60610 1272 aaKnown RBP19.33■□□□□ 0.68
TNFRSF1A-204ENST00000440083 TATP17735 454 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1A-204ENST00000440083 SULT6B1Q6IMI4 303 aa19.31■□□□□ 0.68
TNFRSF1A-204ENST00000440083 PKD1L3Q7Z443 1732 aa19.31■□□□□ 0.68
TNFRSF1A-204ENST00000440083 ZCRB1Q8TBF4 217 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-204ENST00000440083 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-204ENST00000440083 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-204ENST00000440083 HMOX1P09601 288 aa19.29■□□□□ 0.68
TNFRSF1A-204ENST00000440083 FAM196AQ6ZSG2 479 aa19.29■□□□□ 0.68
TNFRSF1A-204ENST00000440083 CFAP53Q96M91 514 aa19.29■□□□□ 0.68
TNFRSF1A-204ENST00000440083 TNS1Q9HBL0 1735 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-204ENST00000440083 TRIM37O94972 964 aa19.28■□□□□ 0.68
TNFRSF1A-204ENST00000440083 WDR43Q15061 677 aaKnown RBP eCLIP19.28■□□□□ 0.68
TNFRSF1A-204ENST00000440083 PTF1AQ7RTS3 328 aa19.28■□□□□ 0.68
TNFRSF1A-204ENST00000440083 KDRP35968 1356 aa19.28■□□□□ 0.68
TNFRSF1A-204ENST00000440083 SBF2Q86WG5 1849 aa19.28■□□□□ 0.68
TNFRSF1A-204ENST00000440083 CYP27B1O15528 508 aa19.25■□□□□ 0.67
TNFRSF1A-204ENST00000440083 ACSBG1Q96GR2 724 aa19.25■□□□□ 0.67
TNFRSF1A-204ENST00000440083 DOT1LQ8TEK3 1739 aa19.24■□□□□ 0.67
TNFRSF1A-204ENST00000440083 BCL9O00512 1426 aa19.24■□□□□ 0.67
TNFRSF1A-204ENST00000440083 PCDH11XQ9BZA7 1347 aa19.24■□□□□ 0.67
TNFRSF1A-204ENST00000440083 PCDH11YQ9BZA8 1340 aa19.24■□□□□ 0.67
TNFRSF1A-204ENST00000440083 KCNQ2O43526 872 aa19.23■□□□□ 0.67
TNFRSF1A-204ENST00000440083 NEFLP07196 543 aa19.23■□□□□ 0.67
TNFRSF1A-204ENST00000440083 DEFB132Q7Z7B7 95 aa19.23■□□□□ 0.67
TNFRSF1A-204ENST00000440083 NHSQ6T4R5 1651 aa19.22■□□□□ 0.67
TNFRSF1A-204ENST00000440083 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
TNFRSF1A-204ENST00000440083 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
TNFRSF1A-204ENST00000440083 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.67
TNFRSF1A-204ENST00000440083 TOGARAM1Q9Y4F4 1720 aa19.21■□□□□ 0.67
TNFRSF1A-204ENST00000440083 KAT6BQ8WYB5 2073 aa19.21■□□□□ 0.67
TNFRSF1A-204ENST00000440083 SF3B2Q13435 895 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1A-204ENST00000440083 PLEKHO1Q53GL0 409 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-204ENST00000440083 ZNF530Q6P9A1 599 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-204ENST00000440083 CCDC125Q86Z20 511 aa19.19■□□□□ 0.66
TNFRSF1A-204ENST00000440083 RSPH6AQ9H0K4 717 aa19.19■□□□□ 0.66
TNFRSF1A-204ENST00000440083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.19■□□□□ 0.66
TNFRSF1A-204ENST00000440083 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
TNFRSF1A-204ENST00000440083 PHKG2P15735 406 aa19.18■□□□□ 0.66
TNFRSF1A-204ENST00000440083 BTAF1O14981 1849 aa19.17■□□□□ 0.66
TNFRSF1A-204ENST00000440083 APBA3O96018 575 aa19.17■□□□□ 0.66
TNFRSF1A-204ENST00000440083 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
TNFRSF1A-204ENST00000440083 EN1Q05925 392 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-204ENST00000440083 BCL11BQ9C0K0 894 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-204ENST00000440083 PLEKHG2Q9H7P9 1386 aa19.17■□□□□ 0.66
TNFRSF1A-204ENST00000440083 PRIM1P49642 420 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-204ENST00000440083 AMOTQ4VCS5 1084 aa19.16■□□□□ 0.66
TNFRSF1A-204ENST00000440083 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
TNFRSF1A-204ENST00000440083 MTHFSDQ2M296 383 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-204ENST00000440083 IFNL2Q8IZJ0 200 aa19.15■□□□□ 0.66
TNFRSF1A-204ENST00000440083 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
TNFRSF1A-204ENST00000440083 KDM6AO15550 1401 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1A-204ENST00000440083 BAG6P46379 1132 aa19.14■□□□□ 0.65
TNFRSF1A-204ENST00000440083 NKX1-1Q15270 411 aaPredicted RBP19.14■□□□□ 0.65
TNFRSF1A-204ENST00000440083 ADAMTS8Q9UP79 889 aa19.14■□□□□ 0.65
TNFRSF1A-204ENST00000440083 EZH2Q15910 746 aaKnown RBP19.13■□□□□ 0.65
TNFRSF1A-204ENST00000440083 ITGB4P16144 1822 aa19.13■□□□□ 0.65
TNFRSF1A-204ENST00000440083 SENP3-EIF4A1A0A087X0R7 540 aa19.11■□□□□ 0.65
TNFRSF1A-204ENST00000440083 C1orf141Q5JVX7 400 aa19.11■□□□□ 0.65
TNFRSF1A-204ENST00000440083 MPRIPQ6WCQ1 1025 aa19.11■□□□□ 0.65
TNFRSF1A-204ENST00000440083 CAMKK2Q96RR4 588 aa19.11■□□□□ 0.65
TNFRSF1A-204ENST00000440083 FCHSD2O94868 740 aa19.1■□□□□ 0.65
TNFRSF1A-204ENST00000440083 RREB1Q92766 1687 aa19.09■□□□□ 0.65
TNFRSF1A-204ENST00000440083 AKAP4Q5JQC9 854 aa19.08■□□□□ 0.64
TNFRSF1A-204ENST00000440083 SALL2Q9Y467 1007 aaPredicted RBP19.08■□□□□ 0.64
TNFRSF1A-204ENST00000440083 RGPD3A6NKT7 1758 aaPredicted RBP19.08■□□□□ 0.64
TNFRSF1A-204ENST00000440083 RGPD4Q7Z3J3 1758 aa19.08■□□□□ 0.64
TNFRSF1A-204ENST00000440083 SCN11AQ9UI33 1791 aa19.08■□□□□ 0.64
TNFRSF1A-204ENST00000440083 NUP188Q5SRE5 1749 aa19.08■□□□□ 0.64
TNFRSF1A-204ENST00000440083 VIRMAQ69YN4 1812 aaKnown RBP19.07■□□□□ 0.64
TNFRSF1A-204ENST00000440083 HSP90AB1P08238 724 aaKnown RBP19.07■□□□□ 0.64
TNFRSF1A-204ENST00000440083 FKBP8Q14318 412 aa19.07■□□□□ 0.64
TNFRSF1A-204ENST00000440083 PIGBQ92521 554 aa19.07■□□□□ 0.64
TNFRSF1A-204ENST00000440083 DCAF5Q96JK2 942 aa19.07■□□□□ 0.64
TNFRSF1A-204ENST00000440083 PLEKHF1Q96S99 279 aa19.07■□□□□ 0.64
TNFRSF1A-204ENST00000440083 LGR6Q9HBX8 967 aa19.07■□□□□ 0.64
TNFRSF1A-204ENST00000440083 SUPT16HQ9Y5B9 1047 aaKnown RBP19.07■□□□□ 0.64
TNFRSF1A-204ENST00000440083 MAP3K5Q99683 1374 aa19.06■□□□□ 0.64
TNFRSF1A-204ENST00000440083 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
TNFRSF1A-204ENST00000440083 PROM2Q8N271 834 aa19.06■□□□□ 0.64
TNFRSF1A-204ENST00000440083 GAS2L2Q8NHY3 880 aa19.06■□□□□ 0.64
TNFRSF1A-204ENST00000440083 ADAMTS7Q9UKP4 1686 aa19.05■□□□□ 0.64
TNFRSF1A-204ENST00000440083 PLSCR1O15162 318 aa19.05■□□□□ 0.64
TNFRSF1A-204ENST00000440083 TMOD3Q9NYL9 352 aa19.05■□□□□ 0.64
TNFRSF1A-204ENST00000440083 RNMTO43148 476 aaKnown RBP19.04■□□□□ 0.64
TNFRSF1A-204ENST00000440083 KCNQ4P56696 695 aa19.03■□□□□ 0.64
TNFRSF1A-204ENST00000440083 CABP4P57796 275 aa19.03■□□□□ 0.64
TNFRSF1A-204ENST00000440083 TXNRD1Q16881 649 aa19.03■□□□□ 0.64
TNFRSF1A-204ENST00000440083 NGEFQ8N5V2 710 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms