RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	HOXC9	P31274	260 aa		22.99	■■□□□ 1.27
LAMB1-205	ENST00000439976	MEGF6	O75095	1541 aa		22.98	■■□□□ 1.27
LAMB1-205	ENST00000439976	PRIM1	P49642	420 aa	Known RBP	22.98	■■□□□ 1.27
LAMB1-205	ENST00000439976	COG3	Q96JB2	828 aa		22.95	■■□□□ 1.26
LAMB1-205	ENST00000439976	TONSL	Q96HA7	1378 aa		22.94	■■□□□ 1.26
LAMB1-205	ENST00000439976	ST20-MTHFS	A0A0A6YYL1	179 aa		22.94	■■□□□ 1.26
LAMB1-205	ENST00000439976	SYTL4	Q96C24	671 aa	Predicted RBP	22.94	■■□□□ 1.26
LAMB1-205	ENST00000439976	ZCRB1	Q8TBF4	217 aa	Known RBP	22.93	■■□□□ 1.26
LAMB1-205	ENST00000439976	TFCP2L1	Q9NZI6	479 aa		22.93	■■□□□ 1.26
LAMB1-205	ENST00000439976	AMPH	P49418	695 aa		22.92	■■□□□ 1.26
LAMB1-205	ENST00000439976	GPR162	Q16538	588 aa		22.92	■■□□□ 1.26
LAMB1-205	ENST00000439976	POLD1	P28340	1107 aa		22.91	■■□□□ 1.26
LAMB1-205	ENST00000439976	C1QTNF8	P60827	252 aa		22.91	■■□□□ 1.26
LAMB1-205	ENST00000439976	NBPF6	Q5VWK0	638 aa		22.91	■■□□□ 1.26
LAMB1-205	ENST00000439976	NLGN2	Q8NFZ4	835 aa		22.91	■■□□□ 1.26
LAMB1-205	ENST00000439976	NBPF4	Q96M43	638 aa		22.91	■■□□□ 1.26
LAMB1-205	ENST00000439976	RTL1	A6NKG5	1358 aa		22.9	■■□□□ 1.26
LAMB1-205	ENST00000439976	KLHL34	Q8N239	644 aa		22.9	■■□□□ 1.26
LAMB1-205	ENST00000439976	RRS1	Q15050	365 aa	Known RBP	22.89	■■□□□ 1.25
LAMB1-205	ENST00000439976	CCNL1	Q9UK58	526 aa	Predicted RBP	22.88	■■□□□ 1.25
LAMB1-205	ENST00000439976	FYB1	O15117	783 aa		22.87	■■□□□ 1.25
LAMB1-205	ENST00000439976	COL23A1	Q86Y22	540 aa	Predicted RBP	22.87	■■□□□ 1.25
LAMB1-205	ENST00000439976	USHBP1	Q8N6Y0	703 aa		22.86	■■□□□ 1.25
LAMB1-205	ENST00000439976	SENP3-EIF4A1	A0A087X0R7	540 aa		22.85	■■□□□ 1.25
LAMB1-205	ENST00000439976	GGNBP2	Q9H3C7	697 aa		22.85	■■□□□ 1.25
LAMB1-205	ENST00000439976	CGNL1	Q0VF96	1302 aa		22.84	■■□□□ 1.25
LAMB1-205	ENST00000439976	YBX3	P16989	372 aa	Known RBP eCLIP	22.84	■■□□□ 1.25
LAMB1-205	ENST00000439976	USP47	Q96K76	1375 aa		22.84	■■□□□ 1.25
LAMB1-205	ENST00000439976	PELP1	Q8IZL8	1130 aa	Known RBP	22.83	■■□□□ 1.25
LAMB1-205	ENST00000439976	C5	P01031	1676 aa		22.83	■■□□□ 1.24
LAMB1-205	ENST00000439976	SLC24A1	O60721	1099 aa		22.82	■■□□□ 1.24
LAMB1-205	ENST00000439976	INSR	P06213	1382 aa		22.81	■■□□□ 1.24
LAMB1-205	ENST00000439976	TAF1L	Q8IZX4	1826 aa		22.81	■■□□□ 1.24
LAMB1-205	ENST00000439976	HSP90AB2P	Q58FF8	381 aa		22.81	■■□□□ 1.24
LAMB1-205	ENST00000439976	RAPGEF4	Q8WZA2	1011 aa		22.8	■■□□□ 1.24
LAMB1-205	ENST00000439976	TOGARAM1	Q9Y4F4	1720 aa		22.79	■■□□□ 1.24
LAMB1-205	ENST00000439976	MSL1	Q68DK7	614 aa		22.79	■■□□□ 1.24
LAMB1-205	ENST00000439976	SMG6	Q86US8	1419 aa	Known RBP	22.79	■■□□□ 1.24
LAMB1-205	ENST00000439976	TAT	P17735	454 aa	Predicted RBP	22.78	■■□□□ 1.24
LAMB1-205	ENST00000439976	PCDH11X	Q9BZA7	1347 aa		22.78	■■□□□ 1.24
LAMB1-205	ENST00000439976	PCDH11Y	Q9BZA8	1340 aa		22.78	■■□□□ 1.24
LAMB1-205	ENST00000439976	KIF20B	Q96Q89	1820 aa		22.78	■■□□□ 1.24
LAMB1-205	ENST00000439976	PALLD	Q8WX93	1383 aa		22.77	■■□□□ 1.24
LAMB1-205	ENST00000439976	CYP27B1	O15528	508 aa		22.77	■■□□□ 1.24
LAMB1-205	ENST00000439976	MSH5	O43196	834 aa		22.77	■■□□□ 1.24
LAMB1-205	ENST00000439976	GIGYF1	O75420	1035 aa	Predicted RBP	22.77	■■□□□ 1.24
LAMB1-205	ENST00000439976	FLT4	P35916	1363 aa		22.76	■■□□□ 1.23
LAMB1-205	ENST00000439976	AMIGO3	Q86WK7	504 aa		22.76	■■□□□ 1.23
LAMB1-205	ENST00000439976	KIF24	Q5T7B8	1368 aa		22.76	■■□□□ 1.23
LAMB1-205	ENST00000439976	ITGB4	P16144	1822 aa		22.75	■■□□□ 1.23
LAMB1-205	ENST00000439976	CEP350	Q5VT06	3117 aa		22.75	■■□□□ 1.23
LAMB1-205	ENST00000439976	PKD1L3	Q7Z443	1732 aa		22.75	■■□□□ 1.23
LAMB1-205	ENST00000439976	GRIN3B	O60391	1043 aa		22.75	■■□□□ 1.23
LAMB1-205	ENST00000439976	TMF1	P82094	1093 aa		22.75	■■□□□ 1.23
LAMB1-205	ENST00000439976	NCAPD2	Q15021	1401 aa		22.74	■■□□□ 1.23
LAMB1-205	ENST00000439976	C4B	P0C0L5	1744 aa		22.74	■■□□□ 1.23
LAMB1-205	ENST00000439976	MPRIP	Q6WCQ1	1025 aa		22.73	■■□□□ 1.23
LAMB1-205	ENST00000439976	CARD14	Q9BXL6	1004 aa		22.73	■■□□□ 1.23
LAMB1-205	ENST00000439976	CD2AP	Q9Y5K6	639 aa		22.72	■■□□□ 1.23
LAMB1-205	ENST00000439976	MAP2	P11137	1827 aa	Known RBP	22.71	■■□□□ 1.23
LAMB1-205	ENST00000439976	UBR3	Q6ZT12	1888 aa		22.71	■■□□□ 1.23
LAMB1-205	ENST00000439976	EMILIN1	Q9Y6C2	1016 aa		22.71	■■□□□ 1.23
LAMB1-205	ENST00000439976	FLAD1	Q8NFF5	587 aa		22.7	■■□□□ 1.22
LAMB1-205	ENST00000439976	ANKRD26	Q9UPS8	1709 aa		22.69	■■□□□ 1.22
LAMB1-205	ENST00000439976	SMIM5	Q71RC9	77 aa		22.69	■■□□□ 1.22
LAMB1-205	ENST00000439976	PIGB	Q92521	554 aa		22.69	■■□□□ 1.22
LAMB1-205	ENST00000439976	ATP10D	Q9P241	1426 aa		22.68	■■□□□ 1.22
LAMB1-205	ENST00000439976	NKX1-1	Q15270	411 aa	Predicted RBP	22.68	■■□□□ 1.22
LAMB1-205	ENST00000439976	ADCY9	O60503	1353 aa		22.67	■■□□□ 1.22
LAMB1-205	ENST00000439976	SMARCC1	Q92922	1105 aa	Predicted RBP	22.67	■■□□□ 1.22
LAMB1-205	ENST00000439976	NSD3	Q9BZ95	1437 aa		22.66	■■□□□ 1.22
LAMB1-205	ENST00000439976	HMGB2	P26583	209 aa	Known RBP	22.65	■■□□□ 1.22
LAMB1-205	ENST00000439976	CDCA8	Q53HL2	280 aa		22.64	■■□□□ 1.21
LAMB1-205	ENST00000439976	AK7	Q96M32	723 aa		22.64	■■□□□ 1.21
LAMB1-205	ENST00000439976	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	22.63	■■□□□ 1.21
LAMB1-205	ENST00000439976	LINC00116	Q8NCU8	138 aa		22.63	■■□□□ 1.21
LAMB1-205	ENST00000439976	LOC102724428	A0A0B4J2F2	783 aa		22.62	■■□□□ 1.21
LAMB1-205	ENST00000439976	PHF14	O94880	888 aa		22.62	■■□□□ 1.21
LAMB1-205	ENST00000439976	SIK1	P57059	783 aa		22.62	■■□□□ 1.21
LAMB1-205	ENST00000439976	WASHC2A	Q641Q2	1341 aa		22.61	■■□□□ 1.21
LAMB1-205	ENST00000439976	EYA1	Q99502	592 aa		22.61	■■□□□ 1.21
LAMB1-205	ENST00000439976	SSFA2	P28290	1259 aa		22.6	■■□□□ 1.21
LAMB1-205	ENST00000439976	ITPK1	Q13572	414 aa		22.6	■■□□□ 1.21
LAMB1-205	ENST00000439976	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	22.6	■■□□□ 1.21
LAMB1-205	ENST00000439976	IGSF1	Q8N6C5	1336 aa		22.59	■■□□□ 1.21
LAMB1-205	ENST00000439976	PPM1G	O15355	546 aa	Predicted RBP	22.59	■■□□□ 1.21
LAMB1-205	ENST00000439976	ASAP1	Q9ULH1	1129 aa		22.59	■■□□□ 1.21
LAMB1-205	ENST00000439976	SPG7	Q9UQ90	795 aa		22.59	■■□□□ 1.21
LAMB1-205	ENST00000439976	PHKG2	P15735	406 aa		22.57	■■□□□ 1.2
LAMB1-205	ENST00000439976	GPBP1L1	Q9HC44	474 aa	Predicted RBP	22.57	■■□□□ 1.2
LAMB1-205	ENST00000439976	POLK	Q9UBT6	870 aa		22.57	■■□□□ 1.2
LAMB1-205	ENST00000439976	WWC3	Q9ULE0	1092 aa		22.57	■■□□□ 1.2
LAMB1-205	ENST00000439976	TMOD3	Q9NYL9	352 aa		22.56	■■□□□ 1.2
LAMB1-205	ENST00000439976	ATG3	Q9NT62	314 aa		22.55	■■□□□ 1.2
LAMB1-205	ENST00000439976	GNPAT	O15228	680 aa		22.54	■■□□□ 1.2
LAMB1-205	ENST00000439976	KIAA1551	Q9HCM1	1747 aa		22.54	■■□□□ 1.2
LAMB1-205	ENST00000439976	CIC	Q96RK0	1608 aa	Predicted RBP	22.53	■■□□□ 1.2
LAMB1-205	ENST00000439976	KDR	P35968	1356 aa		22.53	■■□□□ 1.2
LAMB1-205	ENST00000439976	ATP6V1A	P38606	617 aa		22.53	■■□□□ 1.2
LAMB1-205	ENST00000439976	IFNL2	Q8IZJ0	200 aa		22.53	■■□□□ 1.2

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