RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 PAPPAQ13219 1627 aa22.52■■□□□ 1.2
SNRPD3-204ENST00000439775 STK32BQ9NY57 414 aa22.5■■□□□ 1.19
SNRPD3-204ENST00000439775 EMILIN1Q9Y6C2 1016 aa22.5■■□□□ 1.19
SNRPD3-204ENST00000439775 DOT1LQ8TEK3 1739 aa22.49■■□□□ 1.19
SNRPD3-204ENST00000439775 SLC15A2Q16348 729 aa22.49■■□□□ 1.19
SNRPD3-204ENST00000439775 USHBP1Q8N6Y0 703 aa22.49■■□□□ 1.19
SNRPD3-204ENST00000439775 RAPGEF4Q8WZA2 1011 aa22.49■■□□□ 1.19
SNRPD3-204ENST00000439775 POLR3GLQ9BT43 218 aa22.49■■□□□ 1.19
SNRPD3-204ENST00000439775 NCAPD2Q15021 1401 aa22.48■■□□□ 1.19
SNRPD3-204ENST00000439775 WASHC2AQ641Q2 1341 aa22.46■■□□□ 1.19
SNRPD3-204ENST00000439775 NSD2O96028 1365 aa22.46■■□□□ 1.19
SNRPD3-204ENST00000439775 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
SNRPD3-204ENST00000439775 PRIM1P49642 420 aaKnown RBP22.44■■□□□ 1.18
SNRPD3-204ENST00000439775 SLC27A3Q5K4L6 730 aa22.44■■□□□ 1.18
SNRPD3-204ENST00000439775 PCDH11XQ9BZA7 1347 aa22.44■■□□□ 1.18
SNRPD3-204ENST00000439775 PCDH11YQ9BZA8 1340 aa22.44■■□□□ 1.18
SNRPD3-204ENST00000439775 PDGFDQ9GZP0 370 aaPredicted RBP22.44■■□□□ 1.18
SNRPD3-204ENST00000439775 SYTL4Q96C24 671 aaPredicted RBP22.43■■□□□ 1.18
SNRPD3-204ENST00000439775 LRRC4BQ9NT99 713 aa22.43■■□□□ 1.18
SNRPD3-204ENST00000439775 PPP1R1BQ9UD71 204 aaPredicted RBP22.43■■□□□ 1.18
SNRPD3-204ENST00000439775 PPM1GO15355 546 aaPredicted RBP22.42■■□□□ 1.18
SNRPD3-204ENST00000439775 PANK3Q9H999 370 aa22.42■■□□□ 1.18
SNRPD3-204ENST00000439775 POLKQ9UBT6 870 aa22.42■■□□□ 1.18
SNRPD3-204ENST00000439775 PKD1L3Q7Z443 1732 aa22.42■■□□□ 1.18
SNRPD3-204ENST00000439775 LY75O60449 1722 aa22.4■■□□□ 1.18
SNRPD3-204ENST00000439775 MAP2P11137 1827 aaKnown RBP22.4■■□□□ 1.18
SNRPD3-204ENST00000439775 ZBTB7AO95365 584 aa22.39■■□□□ 1.17
SNRPD3-204ENST00000439775 ZNF827Q17R98 1081 aa22.39■■□□□ 1.17
SNRPD3-204ENST00000439775 KAT6BQ8WYB5 2073 aa22.38■■□□□ 1.17
SNRPD3-204ENST00000439775 PTGER2P43116 358 aa22.38■■□□□ 1.17
SNRPD3-204ENST00000439775 AKT1S1Q96B36 256 aa22.37■■□□□ 1.17
SNRPD3-204ENST00000439775 MTFR1LQ9H019 292 aa22.37■■□□□ 1.17
SNRPD3-204ENST00000439775 PLEKHG2Q9H7P9 1386 aa22.37■■□□□ 1.17
SNRPD3-204ENST00000439775 CYP27B1O15528 508 aa22.36■■□□□ 1.17
SNRPD3-204ENST00000439775 EYA1Q99502 592 aa22.36■■□□□ 1.17
SNRPD3-204ENST00000439775 QSER1Q2KHR3 1735 aa22.36■■□□□ 1.17
SNRPD3-204ENST00000439775 TNNT2P45379 298 aaPredicted RBP22.35■■□□□ 1.17
SNRPD3-204ENST00000439775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.34■■□□□ 1.174e-7■□□□□ 8.8
SNRPD3-204ENST00000439775 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
SNRPD3-204ENST00000439775 EIF4A2Q14240 407 aaKnown RBP22.33■■□□□ 1.17
SNRPD3-204ENST00000439775 SGIP1Q9BQI5 828 aa22.33■■□□□ 1.17
SNRPD3-204ENST00000439775 SPG7Q9UQ90 795 aa22.33■■□□□ 1.17
SNRPD3-204ENST00000439775 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.17
SNRPD3-204ENST00000439775 CCNL1Q9UK58 526 aaPredicted RBP22.32■■□□□ 1.16
SNRPD3-204ENST00000439775 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
SNRPD3-204ENST00000439775 NKX1-1Q15270 411 aaPredicted RBP22.31■■□□□ 1.16
SNRPD3-204ENST00000439775 KCNQ4P56696 695 aa22.3■■□□□ 1.16
SNRPD3-204ENST00000439775 KNSTRNQ9Y448 316 aa22.3■■□□□ 1.16
SNRPD3-204ENST00000439775 PNPLA7Q6ZV29 1317 aa22.3■■□□□ 1.16
SNRPD3-204ENST00000439775 IGSF1Q8N6C5 1336 aa22.3■■□□□ 1.16
SNRPD3-204ENST00000439775 MORC1Q86VD1 984 aa22.29■■□□□ 1.16
SNRPD3-204ENST00000439775 SLC16A10Q8TF71 515 aa22.29■■□□□ 1.16
SNRPD3-204ENST00000439775 TUBGCP6Q96RT7 1819 aa22.29■■□□□ 1.16
SNRPD3-204ENST00000439775 PALLDQ8WX93 1383 aa22.28■■□□□ 1.16
SNRPD3-204ENST00000439775 TFCP2L1Q9NZI6 479 aa22.28■■□□□ 1.16
SNRPD3-204ENST00000439775 HMGB2P26583 209 aaKnown RBP22.27■■□□□ 1.16
SNRPD3-204ENST00000439775 MPRIPQ6WCQ1 1025 aa22.27■■□□□ 1.16
SNRPD3-204ENST00000439775 AMER1Q5JTC6 1135 aaPredicted RBP22.26■■□□□ 1.15
SNRPD3-204ENST00000439775 ITGB4P16144 1822 aa22.26■■□□□ 1.15
SNRPD3-204ENST00000439775 C5P01031 1676 aa22.26■■□□□ 1.15
SNRPD3-204ENST00000439775 COL24A1Q17RW2 1714 aa22.26■■□□□ 1.15
SNRPD3-204ENST00000439775 IFNL2Q8IZJ0 200 aa22.25■■□□□ 1.15
SNRPD3-204ENST00000439775 SMARCC1Q92922 1105 aaPredicted RBP22.25■■□□□ 1.15
SNRPD3-204ENST00000439775 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
SNRPD3-204ENST00000439775 PHKG2P15735 406 aa22.24■■□□□ 1.15
SNRPD3-204ENST00000439775 FHDC1Q9C0D6 1143 aaPredicted RBP22.24■■□□□ 1.15
SNRPD3-204ENST00000439775 DCAF8L1A6NGE4 600 aa22.23■■□□□ 1.15
SNRPD3-204ENST00000439775 PIGBQ92521 554 aa22.23■■□□□ 1.15
SNRPD3-204ENST00000439775 ARXQ96QS3 562 aa22.23■■□□□ 1.15
SNRPD3-204ENST00000439775 SYT17Q9BSW7 474 aa22.22■■□□□ 1.15
SNRPD3-204ENST00000439775 TAF1LQ8IZX4 1826 aa22.2■■□□□ 1.14
SNRPD3-204ENST00000439775 TMOD3Q9NYL9 352 aa22.2■■□□□ 1.14
SNRPD3-204ENST00000439775 PER1O15534 1290 aaPredicted RBP22.19■■□□□ 1.14
SNRPD3-204ENST00000439775 POLD1P28340 1107 aa22.19■■□□□ 1.14
SNRPD3-204ENST00000439775 C4BP0C0L5 1744 aa22.18■■□□□ 1.14
SNRPD3-204ENST00000439775 KDRP35968 1356 aa22.18■■□□□ 1.14
SNRPD3-204ENST00000439775 AMOTQ4VCS5 1084 aa22.17■■□□□ 1.14
SNRPD3-204ENST00000439775 HSP90AB1P08238 724 aaKnown RBP22.16■■□□□ 1.14
SNRPD3-204ENST00000439775 PLEKHO1Q53GL0 409 aaPredicted RBP22.16■■□□□ 1.14
SNRPD3-204ENST00000439775 COL23A1Q86Y22 540 aaPredicted RBP22.16■■□□□ 1.14
SNRPD3-204ENST00000439775 FLAD1Q8NFF5 587 aa22.16■■□□□ 1.14
SNRPD3-204ENST00000439775 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
SNRPD3-204ENST00000439775 IL13P35225 146 aa22.15■■□□□ 1.14
SNRPD3-204ENST00000439775 SIK1P57059 783 aa22.15■■□□□ 1.14
SNRPD3-204ENST00000439775 AEBP1Q8IUX7 1158 aa22.15■■□□□ 1.14
SNRPD3-204ENST00000439775 DCAF5Q96JK2 942 aa22.15■■□□□ 1.14
SNRPD3-204ENST00000439775 NPC1L1Q9UHC9 1359 aa22.14■■□□□ 1.14
SNRPD3-204ENST00000439775 ERVV-2B6SEH9 535 aa22.14■■□□□ 1.13
SNRPD3-204ENST00000439775 ASAP1Q9ULH1 1129 aa22.14■■□□□ 1.13
SNRPD3-204ENST00000439775 KDM6AO15550 1401 aaPredicted RBP22.14■■□□□ 1.13
SNRPD3-204ENST00000439775 YY1P25490 414 aa22.13■■□□□ 1.13
SNRPD3-204ENST00000439775 SULT6B1Q6IMI4 303 aa22.13■■□□□ 1.13
SNRPD3-204ENST00000439775 ZNF530Q6P9A1 599 aaPredicted RBP22.13■■□□□ 1.13
SNRPD3-204ENST00000439775 AK7Q96M32 723 aa22.13■■□□□ 1.13
SNRPD3-204ENST00000439775 UTRNP46939 3433 aa22.13■■□□□ 1.13
SNRPD3-204ENST00000439775 MSH5O43196 834 aa22.12■■□□□ 1.13
SNRPD3-204ENST00000439775 MTHFSP49914 203 aa22.11■■□□□ 1.13
SNRPD3-204ENST00000439775 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
SNRPD3-204ENST00000439775 UBR3Q6ZT12 1888 aa22.11■■□□□ 1.13
SNRPD3-204ENST00000439775 ZNF831Q5JPB2 1677 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms