RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
SMARCA2-213ENST00000439732 NCAPD2Q15021 1401 aa12.77□□□□□ -0.37
SMARCA2-213ENST00000439732 TNS2Q63HR2 1409 aa12.77□□□□□ -0.37
SMARCA2-213ENST00000439732 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
SMARCA2-213ENST00000439732 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-213ENST00000439732 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
SMARCA2-213ENST00000439732 BCL9O00512 1426 aa12.76□□□□□ -0.37
SMARCA2-213ENST00000439732 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
SMARCA2-213ENST00000439732 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
SMARCA2-213ENST00000439732 PCDH11XQ9BZA7 1347 aa12.75□□□□□ -0.37
SMARCA2-213ENST00000439732 PCDH11YQ9BZA8 1340 aa12.75□□□□□ -0.37
SMARCA2-213ENST00000439732 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
SMARCA2-213ENST00000439732 LRRC37A3O60309 1634 aa12.74□□□□□ -0.37
SMARCA2-213ENST00000439732 MEGF6O75095 1541 aa12.74□□□□□ -0.37
SMARCA2-213ENST00000439732 TRIM37O94972 964 aa12.74□□□□□ -0.37
SMARCA2-213ENST00000439732 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
SMARCA2-213ENST00000439732 KDRP35968 1356 aa12.73□□□□□ -0.37
SMARCA2-213ENST00000439732 BAG6P46379 1132 aa12.73□□□□□ -0.37
SMARCA2-213ENST00000439732 ANP32CO43423 234 aa12.72□□□□□ -0.37
SMARCA2-213ENST00000439732 U2AF1L5P0DN76 240 aaPredicted RBP12.72□□□□□ -0.37
SMARCA2-213ENST00000439732 U2AF1Q01081 240 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCA2-213ENST00000439732 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
SMARCA2-213ENST00000439732 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
SMARCA2-213ENST00000439732 PNNQ9H307 717 aaKnown RBP12.72□□□□□ -0.37
SMARCA2-213ENST00000439732 CYP27B1O15528 508 aa12.71□□□□□ -0.37
SMARCA2-213ENST00000439732 FCHSD2O94868 740 aa12.71□□□□□ -0.37
SMARCA2-213ENST00000439732 APBA3O96018 575 aa12.71□□□□□ -0.37
SMARCA2-213ENST00000439732 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
SMARCA2-213ENST00000439732 HMOX1P09601 288 aa12.71□□□□□ -0.37
SMARCA2-213ENST00000439732 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
SMARCA2-213ENST00000439732 COL3A1P02461 1466 aaPredicted RBP12.71□□□□□ -0.38
SMARCA2-213ENST00000439732 NEFMP07197 916 aa12.7□□□□□ -0.38
SMARCA2-213ENST00000439732 C1orf141Q5JVX7 400 aa12.7□□□□□ -0.38
SMARCA2-213ENST00000439732 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
SMARCA2-213ENST00000439732 RGPD1P0DJD0 1748 aa12.7□□□□□ -0.38
SMARCA2-213ENST00000439732 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
SMARCA2-213ENST00000439732 PHKG2P15735 406 aa12.69□□□□□ -0.38
SMARCA2-213ENST00000439732 PLSCR1O15162 318 aa12.68□□□□□ -0.38
SMARCA2-213ENST00000439732 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
SMARCA2-213ENST00000439732 ACSBG1Q96GR2 724 aa12.68□□□□□ -0.38
SMARCA2-213ENST00000439732 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
SMARCA2-213ENST00000439732 KCNQ2O43526 872 aa12.67□□□□□ -0.38
SMARCA2-213ENST00000439732 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
SMARCA2-213ENST00000439732 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-213ENST00000439732 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
SMARCA2-213ENST00000439732 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
SMARCA2-213ENST00000439732 HMGB2P26583 209 aaKnown RBP12.66□□□□□ -0.38
SMARCA2-213ENST00000439732 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
SMARCA2-213ENST00000439732 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
SMARCA2-213ENST00000439732 DEFB132Q7Z7B7 95 aa12.66□□□□□ -0.38
SMARCA2-213ENST00000439732 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
SMARCA2-213ENST00000439732 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
SMARCA2-213ENST00000439732 PRKAR2BP31323 418 aa12.65□□□□□ -0.38
SMARCA2-213ENST00000439732 WDR43Q15061 677 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMARCA2-213ENST00000439732 MTHFSDQ2M296 383 aaKnown RBP12.65□□□□□ -0.38
SMARCA2-213ENST00000439732 CAMKK2Q96RR4 588 aa12.65□□□□□ -0.38
SMARCA2-213ENST00000439732 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
SMARCA2-213ENST00000439732 PTF1AQ7RTS3 328 aa12.64□□□□□ -0.39
SMARCA2-213ENST00000439732 EZH2Q15910 746 aaKnown RBP12.63□□□□□ -0.39
SMARCA2-213ENST00000439732 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
SMARCA2-213ENST00000439732 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
SMARCA2-213ENST00000439732 TMOD3Q9NYL9 352 aa12.63□□□□□ -0.39
SMARCA2-213ENST00000439732 NHSQ6T4R5 1651 aa12.63□□□□□ -0.39
SMARCA2-213ENST00000439732 TNS1Q9HBL0 1735 aaKnown RBP12.62□□□□□ -0.39
SMARCA2-213ENST00000439732 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
SMARCA2-213ENST00000439732 CABP4P57796 275 aa12.62□□□□□ -0.39
SMARCA2-213ENST00000439732 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
SMARCA2-213ENST00000439732 NBPF14Q5TI25 921 aa12.61□□□□□ -0.39
SMARCA2-213ENST00000439732 PIGBQ92521 554 aa12.61□□□□□ -0.39
SMARCA2-213ENST00000439732 BTAF1O14981 1849 aa12.6□□□□□ -0.39
SMARCA2-213ENST00000439732 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
SMARCA2-213ENST00000439732 HTATSF1O43719 755 aaKnown RBP12.6□□□□□ -0.39
SMARCA2-213ENST00000439732 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
SMARCA2-213ENST00000439732 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
SMARCA2-213ENST00000439732 PLEKHF1Q96S99 279 aa12.6□□□□□ -0.39
SMARCA2-213ENST00000439732 ITGB4P16144 1822 aa12.6□□□□□ -0.39
SMARCA2-213ENST00000439732 MAP3K5Q99683 1374 aa12.59□□□□□ -0.39
SMARCA2-213ENST00000439732 TXNRD1Q16881 649 aa12.59□□□□□ -0.39
SMARCA2-213ENST00000439732 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
SMARCA2-213ENST00000439732 MRS2Q9HD23 443 aa12.59□□□□□ -0.39
SMARCA2-213ENST00000439732 ADAMTS8Q9UP79 889 aa12.59□□□□□ -0.39
SMARCA2-213ENST00000439732 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
SMARCA2-213ENST00000439732 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.39
SMARCA2-213ENST00000439732 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.39
SMARCA2-213ENST00000439732 TEFQ10587 303 aa12.58□□□□□ -0.4
SMARCA2-213ENST00000439732 NFE2L2Q16236 605 aa12.58□□□□□ -0.4
SMARCA2-213ENST00000439732 PROM2Q8N271 834 aa12.58□□□□□ -0.4
SMARCA2-213ENST00000439732 RUNDC1Q96C34 613 aa12.58□□□□□ -0.4
SMARCA2-213ENST00000439732 LGR6Q9HBX8 967 aa12.58□□□□□ -0.4
SMARCA2-213ENST00000439732 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
SMARCA2-213ENST00000439732 SCN11AQ9UI33 1791 aa12.56□□□□□ -0.4
SMARCA2-213ENST00000439732 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
SMARCA2-213ENST00000439732 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
SMARCA2-213ENST00000439732 IL17REQ8NFR9 667 aa12.56□□□□□ -0.4
SMARCA2-213ENST00000439732 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
SMARCA2-213ENST00000439732 CCNL1Q9UK58 526 aaPredicted RBP12.56□□□□□ -0.4
SMARCA2-213ENST00000439732 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
SMARCA2-213ENST00000439732 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
SMARCA2-213ENST00000439732 ATG3Q9NT62 314 aa12.55□□□□□ -0.4
SMARCA2-213ENST00000439732 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms