RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.16
IRF1-204ENST00000439555 NLRP2Q9NX02 1062 aa16.02■□□□□ 0.16
IRF1-204ENST00000439555 TUBGCP6Q96RT7 1819 aa16.02■□□□□ 0.16
IRF1-204ENST00000439555 ZNF827Q17R98 1081 aa16.01■□□□□ 0.15
IRF1-204ENST00000439555 LRRC4BQ9NT99 713 aa16.01■□□□□ 0.15
IRF1-204ENST00000439555 LY75O60449 1722 aa16■□□□□ 0.15
IRF1-204ENST00000439555 IL2RBP14784 551 aa16■□□□□ 0.15
IRF1-204ENST00000439555 ACSBG1Q96GR2 724 aa16■□□□□ 0.15
IRF1-204ENST00000439555 LTN1O94822 1766 aa16■□□□□ 0.15
IRF1-204ENST00000439555 FYB1O15117 783 aa15.99■□□□□ 0.15
IRF1-204ENST00000439555 MAP3K19Q56UN5 1328 aa15.97■□□□□ 0.15
IRF1-204ENST00000439555 PNPLA7Q6ZV29 1317 aa15.96■□□□□ 0.15
IRF1-204ENST00000439555 HOXC9P31274 260 aa15.96■□□□□ 0.15
IRF1-204ENST00000439555 AMPHP49418 695 aa15.96■□□□□ 0.15
IRF1-204ENST00000439555 RTL1A6NKG5 1358 aa15.94■□□□□ 0.14
IRF1-204ENST00000439555 FAM208AQ9UK61 1670 aaKnown RBP15.93■□□□□ 0.14
IRF1-204ENST00000439555 HSPA6P17066 643 aa15.93■□□□□ 0.14
IRF1-204ENST00000439555 HMGB2P26583 209 aaKnown RBP15.93■□□□□ 0.14
IRF1-204ENST00000439555 PELP1Q8IZL8 1130 aaKnown RBP15.93■□□□□ 0.14
IRF1-204ENST00000439555 KLHL34Q8N239 644 aa15.93■□□□□ 0.14
IRF1-204ENST00000439555 NLGN2Q8NFZ4 835 aa15.93■□□□□ 0.14
IRF1-204ENST00000439555 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
IRF1-204ENST00000439555 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
IRF1-204ENST00000439555 TFCP2L1Q9NZI6 479 aa15.93■□□□□ 0.14
IRF1-204ENST00000439555 KIF24Q5T7B8 1368 aa15.92■□□□□ 0.14
IRF1-204ENST00000439555 YBX3P16989 372 aaKnown RBP eCLIP15.92■□□□□ 0.14
IRF1-204ENST00000439555 FBLN1P23142 703 aa15.92■□□□□ 0.14
IRF1-204ENST00000439555 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
IRF1-204ENST00000439555 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
IRF1-204ENST00000439555 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
IRF1-204ENST00000439555 RRS1Q15050 365 aaKnown RBP15.9■□□□□ 0.14
IRF1-204ENST00000439555 GPBP1L1Q9HC44 474 aaPredicted RBP15.9■□□□□ 0.14
IRF1-204ENST00000439555 ATP10DQ9P241 1426 aa15.9■□□□□ 0.14
IRF1-204ENST00000439555 CD2APQ9Y5K6 639 aa15.89■□□□□ 0.13
IRF1-204ENST00000439555 CGNL1Q0VF96 1302 aa15.89■□□□□ 0.13
IRF1-204ENST00000439555 INSRP06213 1382 aa15.88■□□□□ 0.13
IRF1-204ENST00000439555 TAF1LQ8IZX4 1826 aa15.87■□□□□ 0.13
IRF1-204ENST00000439555 DOT1LQ8TEK3 1739 aa15.87■□□□□ 0.13
IRF1-204ENST00000439555 ADCY9O60503 1353 aa15.87■□□□□ 0.13
IRF1-204ENST00000439555 FLT4P35916 1363 aa15.87■□□□□ 0.13
IRF1-204ENST00000439555 SMG6Q86US8 1419 aaKnown RBP15.86■□□□□ 0.13
IRF1-204ENST00000439555 NSD3Q9BZ95 1437 aa15.86■□□□□ 0.13
IRF1-204ENST00000439555 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
IRF1-204ENST00000439555 ZCRB1Q8TBF4 217 aaKnown RBP15.86■□□□□ 0.13
IRF1-204ENST00000439555 DDX54Q8TDD1 881 aaKnown RBP15.86■□□□□ 0.13
IRF1-204ENST00000439555 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
IRF1-204ENST00000439555 HSP90AB2PQ58FF8 381 aa15.85■□□□□ 0.13
IRF1-204ENST00000439555 COL23A1Q86Y22 540 aaPredicted RBP15.85■□□□□ 0.13
IRF1-204ENST00000439555 FLAD1Q8NFF5 587 aa15.85■□□□□ 0.13
IRF1-204ENST00000439555 HSPA5P11021 654 aaKnown RBP15.84■□□□□ 0.13
IRF1-204ENST00000439555 PRIM1P49642 420 aaKnown RBP15.84■□□□□ 0.13
IRF1-204ENST00000439555 RAPGEF4Q8WZA2 1011 aa15.84■□□□□ 0.13
IRF1-204ENST00000439555 C5P01031 1676 aa15.83■□□□□ 0.13
IRF1-204ENST00000439555 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
IRF1-204ENST00000439555 CCNL1Q9UK58 526 aaPredicted RBP15.82■□□□□ 0.12
IRF1-204ENST00000439555 NSD2O96028 1365 aa15.82■□□□□ 0.12
IRF1-204ENST00000439555 TATP17735 454 aaPredicted RBP15.81■□□□□ 0.12
IRF1-204ENST00000439555 KCNQ4P56696 695 aa15.81■□□□□ 0.12
IRF1-204ENST00000439555 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
IRF1-204ENST00000439555 SYTL4Q96C24 671 aaPredicted RBP15.81■□□□□ 0.12
IRF1-204ENST00000439555 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
IRF1-204ENST00000439555 MEGF6O75095 1541 aa15.8■□□□□ 0.12
IRF1-204ENST00000439555 MSH5O43196 834 aa15.79■□□□□ 0.12
IRF1-204ENST00000439555 APLP1P51693 650 aa15.79■□□□□ 0.12
IRF1-204ENST00000439555 USHBP1Q8N6Y0 703 aa15.78■□□□□ 0.12
IRF1-204ENST00000439555 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
IRF1-204ENST00000439555 PANK3Q9H999 370 aa15.78■□□□□ 0.12
IRF1-204ENST00000439555 POLKQ9UBT6 870 aa15.78■□□□□ 0.12
IRF1-204ENST00000439555 PCDH11XQ9BZA7 1347 aa15.77■□□□□ 0.12
IRF1-204ENST00000439555 PCDH11YQ9BZA8 1340 aa15.77■□□□□ 0.12
IRF1-204ENST00000439555 KIF3CO14782 793 aa15.77■□□□□ 0.12
IRF1-204ENST00000439555 PPM1GO15355 546 aaPredicted RBP15.77■□□□□ 0.12
IRF1-204ENST00000439555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.77■□□□□ 0.12
IRF1-204ENST00000439555 UBR3Q6ZT12 1888 aa15.77■□□□□ 0.11
IRF1-204ENST00000439555 NCAPD2Q15021 1401 aa15.77■□□□□ 0.11
IRF1-204ENST00000439555 ITGB4P16144 1822 aa15.76■□□□□ 0.11
IRF1-204ENST00000439555 DNAJC5GQ8N7S2 189 aa15.76■□□□□ 0.11
IRF1-204ENST00000439555 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
IRF1-204ENST00000439555 KIF20BQ96Q89 1820 aa15.74■□□□□ 0.11
IRF1-204ENST00000439555 KIF13BQ9NQT8 1826 aa15.74■□□□□ 0.11
IRF1-204ENST00000439555 TOMM70O94826 608 aa15.74■□□□□ 0.11
IRF1-204ENST00000439555 MSL1Q68DK7 614 aa15.74■□□□□ 0.11
IRF1-204ENST00000439555 EYA1Q99502 592 aa15.74■□□□□ 0.11
IRF1-204ENST00000439555 CICQ96RK0 1608 aaPredicted RBP15.74■□□□□ 0.11
IRF1-204ENST00000439555 C4BP0C0L5 1744 aa15.74■□□□□ 0.11
IRF1-204ENST00000439555 CYP27B1O15528 508 aa15.73■□□□□ 0.11
IRF1-204ENST00000439555 NKX1-1Q15270 411 aaPredicted RBP15.73■□□□□ 0.11
IRF1-204ENST00000439555 ZNF526Q8TF50 670 aaPredicted RBP15.73■□□□□ 0.11
IRF1-204ENST00000439555 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
IRF1-204ENST00000439555 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
IRF1-204ENST00000439555 EIF4A2Q14240 407 aaKnown RBP15.71■□□□□ 0.11
IRF1-204ENST00000439555 KNSTRNQ9Y448 316 aa15.71■□□□□ 0.11
IRF1-204ENST00000439555 WDR90Q96KV7 1748 aa15.71■□□□□ 0.1
IRF1-204ENST00000439555 TOGARAM1Q9Y4F4 1720 aa15.71■□□□□ 0.1
IRF1-204ENST00000439555 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
IRF1-204ENST00000439555 MAP2P11137 1827 aaKnown RBP15.7■□□□□ 0.1
IRF1-204ENST00000439555 MORC1Q86VD1 984 aa15.69■□□□□ 0.1
IRF1-204ENST00000439555 SMARCC1Q92922 1105 aaPredicted RBP15.69■□□□□ 0.1
IRF1-204ENST00000439555 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
IRF1-204ENST00000439555 PALLDQ8WX93 1383 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms