RNA–Protein interactions for RNA: ENST00000438886.1

APEX1-203, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-203ENST00000438886 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
APEX1-203ENST00000438886 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
APEX1-203ENST00000438886 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
APEX1-203ENST00000438886 PCDH11XQ9BZA7 1347 aa11.28□□□□□ -0.6
APEX1-203ENST00000438886 PCDH11YQ9BZA8 1340 aa11.28□□□□□ -0.6
APEX1-203ENST00000438886 RGS12O14924 1447 aa11.27□□□□□ -0.6
APEX1-203ENST00000438886 EXOC5O00471 708 aa11.27□□□□□ -0.61
APEX1-203ENST00000438886 DDB1Q16531 1140 aa11.27□□□□□ -0.61
APEX1-203ENST00000438886 PLEKHO1Q53GL0 409 aaPredicted RBP11.27□□□□□ -0.61
APEX1-203ENST00000438886 USHBP1Q8N6Y0 703 aa11.27□□□□□ -0.61
APEX1-203ENST00000438886 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
APEX1-203ENST00000438886 BCL9O00512 1426 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 SHANK3Q9BYB0 1731 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 BRWD3Q6RI45 1802 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 A0A0G2JS52 829 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 HMOX1P09601 288 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 MYT1Q01538 1121 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 SEPT12Q8IYM1 358 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 MIER1Q8N108 512 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
APEX1-203ENST00000438886 MAPK8IP3Q9UPT6 1336 aa11.26□□□□□ -0.61
APEX1-203ENST00000438886 HSP90AB1P08238 724 aaKnown RBP11.25□□□□□ -0.61
APEX1-203ENST00000438886 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
APEX1-203ENST00000438886 PDE3BQ13370 1112 aa11.25□□□□□ -0.61
APEX1-203ENST00000438886 AEBP1Q8IUX7 1158 aa11.25□□□□□ -0.61
APEX1-203ENST00000438886 C1orf141Q5JVX7 400 aa11.24□□□□□ -0.61
APEX1-203ENST00000438886 NGEFQ8N5V2 710 aa11.24□□□□□ -0.61
APEX1-203ENST00000438886 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
APEX1-203ENST00000438886 ADAMTS8Q9UP79 889 aa11.24□□□□□ -0.61
APEX1-203ENST00000438886 CCDC184Q52MB2 194 aa11.23□□□□□ -0.61
APEX1-203ENST00000438886 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
APEX1-203ENST00000438886 KRT27Q7Z3Y8 459 aa11.23□□□□□ -0.61
APEX1-203ENST00000438886 IFNL2Q8IZJ0 200 aa11.23□□□□□ -0.61
APEX1-203ENST00000438886 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
APEX1-203ENST00000438886 EP400Q96L91 3159 aa11.23□□□□□ -0.61
APEX1-203ENST00000438886 HTATSF1O43719 755 aaKnown RBP11.22□□□□□ -0.61
APEX1-203ENST00000438886 LMOD3Q0VAK6 560 aa11.22□□□□□ -0.61
APEX1-203ENST00000438886 AKAP4Q5JQC9 854 aa11.22□□□□□ -0.61
APEX1-203ENST00000438886 ZNF530Q6P9A1 599 aaPredicted RBP11.22□□□□□ -0.61
APEX1-203ENST00000438886 ADAMTS7Q9UKP4 1686 aa11.22□□□□□ -0.61
APEX1-203ENST00000438886 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.61
APEX1-203ENST00000438886 MAP3K5Q99683 1374 aa11.21□□□□□ -0.61
APEX1-203ENST00000438886 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
APEX1-203ENST00000438886 DLG5Q8TDM6 1919 aa11.21□□□□□ -0.62
APEX1-203ENST00000438886 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.62
APEX1-203ENST00000438886 PHKG2P15735 406 aa11.2□□□□□ -0.62
APEX1-203ENST00000438886 NFE2L2Q16236 605 aa11.2□□□□□ -0.62
APEX1-203ENST00000438886 FAM196AQ6ZSG2 479 aa11.2□□□□□ -0.62
APEX1-203ENST00000438886 DCAF5Q96JK2 942 aa11.2□□□□□ -0.62
APEX1-203ENST00000438886 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
APEX1-203ENST00000438886 GNAT3A8MTJ3 354 aa11.19□□□□□ -0.62
APEX1-203ENST00000438886 CYP27B1O15528 508 aa11.19□□□□□ -0.62
APEX1-203ENST00000438886 MTHFSDQ2M296 383 aaKnown RBP11.19□□□□□ -0.62
APEX1-203ENST00000438886 FAM9BQ8IZU0 186 aa11.19□□□□□ -0.62
APEX1-203ENST00000438886 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
APEX1-203ENST00000438886 NHSQ6T4R5 1651 aa11.19□□□□□ -0.62
APEX1-203ENST00000438886 KAT6BQ8WYB5 2073 aa11.19□□□□□ -0.62
APEX1-203ENST00000438886 DOT1LQ8TEK3 1739 aa11.18□□□□□ -0.62
APEX1-203ENST00000438886 ERVV-2B6SEH9 535 aa11.18□□□□□ -0.62
APEX1-203ENST00000438886 TMPOP42166 694 aaKnown RBP11.18□□□□□ -0.62
APEX1-203ENST00000438886 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
APEX1-203ENST00000438886 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
APEX1-203ENST00000438886 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
APEX1-203ENST00000438886 MRC1P22897 1456 aa11.18□□□□□ -0.62
APEX1-203ENST00000438886 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
APEX1-203ENST00000438886 ITGB4P16144 1822 aa11.16□□□□□ -0.62
APEX1-203ENST00000438886 TOGARAM1Q9Y4F4 1720 aa11.16□□□□□ -0.62
APEX1-203ENST00000438886 CALD1Q05682 793 aaKnown RBP11.16□□□□□ -0.62
APEX1-203ENST00000438886 CCDC27Q2M243 656 aa11.16□□□□□ -0.62
APEX1-203ENST00000438886 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
APEX1-203ENST00000438886 KDM6AO15550 1401 aaPredicted RBP11.16□□□□□ -0.62
APEX1-203ENST00000438886 APAF1O14727 1248 aa11.15□□□□□ -0.62
APEX1-203ENST00000438886 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
APEX1-203ENST00000438886 RIPK4P57078 832 aa11.15□□□□□ -0.62
APEX1-203ENST00000438886 CCDC125Q86Z20 511 aa11.15□□□□□ -0.62
APEX1-203ENST00000438886 RGPD3A6NKT7 1758 aaPredicted RBP11.15□□□□□ -0.62
APEX1-203ENST00000438886 SIPA1L3O60292 1781 aaPredicted RBP11.15□□□□□ -0.62
APEX1-203ENST00000438886 RGPD4Q7Z3J3 1758 aa11.15□□□□□ -0.62
APEX1-203ENST00000438886 RNMTO43148 476 aaKnown RBP11.14□□□□□ -0.63
APEX1-203ENST00000438886 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
APEX1-203ENST00000438886 TNS1Q9HBL0 1735 aaKnown RBP11.13□□□□□ -0.63
APEX1-203ENST00000438886 TEFQ10587 303 aa11.13□□□□□ -0.63
APEX1-203ENST00000438886 SLC52A2Q9HAB3 445 aa11.13□□□□□ -0.63
APEX1-203ENST00000438886 BABAM1Q9NWV8 329 aa11.13□□□□□ -0.63
APEX1-203ENST00000438886 TMOD3Q9NYL9 352 aa11.13□□□□□ -0.63
APEX1-203ENST00000438886 BTAF1O14981 1849 aa11.13□□□□□ -0.63
APEX1-203ENST00000438886 CABP4P57796 275 aa11.12□□□□□ -0.63
APEX1-203ENST00000438886 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
APEX1-203ENST00000438886 PAPPAQ13219 1627 aa11.12□□□□□ -0.63
APEX1-203ENST00000438886 IL16Q14005 1332 aa11.11□□□□□ -0.63
APEX1-203ENST00000438886 ZNF831Q5JPB2 1677 aa11.11□□□□□ -0.63
APEX1-203ENST00000438886 SF3B2Q13435 895 aaKnown RBP11.11□□□□□ -0.63
APEX1-203ENST00000438886 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
APEX1-203ENST00000438886 SMARCC1Q92922 1105 aaPredicted RBP11.11□□□□□ -0.63
APEX1-203ENST00000438886 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
APEX1-203ENST00000438886 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
APEX1-203ENST00000438886 WDR63Q8IWG1 891 aa11.1□□□□□ -0.63
APEX1-203ENST00000438886 TRIM35Q9UPQ4 493 aa11.1□□□□□ -0.63
APEX1-203ENST00000438886 KDM3BQ7LBC6 1761 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms