RNA–Protein interactions for RNA: ENST00000438748.5

POLR1B-208, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-208ENST00000438748 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
POLR1B-208ENST00000438748 OVOS2A0A0G2JMS6 1433 aa16.61■□□□□ 0.25
POLR1B-208ENST00000438748 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
POLR1B-208ENST00000438748 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
POLR1B-208ENST00000438748 NEFMP07197 916 aa16.58■□□□□ 0.24
POLR1B-208ENST00000438748 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.24
POLR1B-208ENST00000438748 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
POLR1B-208ENST00000438748 KDRP35968 1356 aa16.58■□□□□ 0.24
POLR1B-208ENST00000438748 ILDR2Q71H61 639 aa16.57■□□□□ 0.24
POLR1B-208ENST00000438748 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
POLR1B-208ENST00000438748 PKD1L3Q7Z443 1732 aa16.56■□□□□ 0.24
POLR1B-208ENST00000438748 PCDH11XQ9BZA7 1347 aa16.56■□□□□ 0.24
POLR1B-208ENST00000438748 PCDH11YQ9BZA8 1340 aa16.56■□□□□ 0.24
POLR1B-208ENST00000438748 PLEKHO1Q53GL0 409 aaPredicted RBP16.56■□□□□ 0.24
POLR1B-208ENST00000438748 PLEKHG2Q9H7P9 1386 aa16.55■□□□□ 0.24
POLR1B-208ENST00000438748 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
POLR1B-208ENST00000438748 AMOTQ4VCS5 1084 aa16.54■□□□□ 0.24
POLR1B-208ENST00000438748 FAM182BQ5T319 152 aa16.54■□□□□ 0.24
POLR1B-208ENST00000438748 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
POLR1B-208ENST00000438748 SHANK3Q9BYB0 1731 aa16.53■□□□□ 0.24
POLR1B-208ENST00000438748 MAPK8IP3Q9UPT6 1336 aa16.53■□□□□ 0.24
POLR1B-208ENST00000438748 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
POLR1B-208ENST00000438748 C1orf141Q5JVX7 400 aa16.53■□□□□ 0.24
POLR1B-208ENST00000438748 ZNF530Q6P9A1 599 aaPredicted RBP16.53■□□□□ 0.24
POLR1B-208ENST00000438748 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
POLR1B-208ENST00000438748 FCHSD2O94868 740 aa16.52■□□□□ 0.24
POLR1B-208ENST00000438748 MARCH10Q8NA82 808 aaPredicted RBP16.52■□□□□ 0.24
POLR1B-208ENST00000438748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.52■□□□□ 0.241e-6■□□□□ 10.8
POLR1B-208ENST00000438748 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
POLR1B-208ENST00000438748 IFNL2Q8IZJ0 200 aa16.5■□□□□ 0.23
POLR1B-208ENST00000438748 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
POLR1B-208ENST00000438748 CCER2I3L3R5 266 aa16.48■□□□□ 0.23
POLR1B-208ENST00000438748 CYP27B1O15528 508 aa16.48■□□□□ 0.23
POLR1B-208ENST00000438748 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
POLR1B-208ENST00000438748 PHKG2P15735 406 aa16.48■□□□□ 0.23
POLR1B-208ENST00000438748 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
POLR1B-208ENST00000438748 MIER1Q8N108 512 aa16.48■□□□□ 0.23
POLR1B-208ENST00000438748 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
POLR1B-208ENST00000438748 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
POLR1B-208ENST00000438748 MTHFSDQ2M296 383 aaKnown RBP16.47■□□□□ 0.23
POLR1B-208ENST00000438748 ACSBG1Q96GR2 724 aa16.47■□□□□ 0.23
POLR1B-208ENST00000438748 SF3B2Q13435 895 aaKnown RBP16.46■□□□□ 0.23
POLR1B-208ENST00000438748 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
POLR1B-208ENST00000438748 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
POLR1B-208ENST00000438748 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
POLR1B-208ENST00000438748 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
POLR1B-208ENST00000438748 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
POLR1B-208ENST00000438748 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
POLR1B-208ENST00000438748 MAP3K5Q99683 1374 aa16.45■□□□□ 0.22
POLR1B-208ENST00000438748 NHSQ6T4R5 1651 aa16.44■□□□□ 0.22
POLR1B-208ENST00000438748 TRIM37O94972 964 aa16.44■□□□□ 0.22
POLR1B-208ENST00000438748 BCL9O00512 1426 aa16.44■□□□□ 0.22
POLR1B-208ENST00000438748 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
POLR1B-208ENST00000438748 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
POLR1B-208ENST00000438748 PLEKHF1Q96S99 279 aa16.43■□□□□ 0.22
POLR1B-208ENST00000438748 TOGARAM1Q9Y4F4 1720 aa16.42■□□□□ 0.22
POLR1B-208ENST00000438748 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
POLR1B-208ENST00000438748 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
POLR1B-208ENST00000438748 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
POLR1B-208ENST00000438748 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
POLR1B-208ENST00000438748 KAT6BQ8WYB5 2073 aa16.41■□□□□ 0.22
POLR1B-208ENST00000438748 NKX1-1Q15270 411 aaPredicted RBP16.41■□□□□ 0.22
POLR1B-208ENST00000438748 KDM6AO15550 1401 aaPredicted RBP16.41■□□□□ 0.22
POLR1B-208ENST00000438748 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
POLR1B-208ENST00000438748 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
POLR1B-208ENST00000438748 NEUROD2Q15784 382 aa16.4■□□□□ 0.22
POLR1B-208ENST00000438748 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
POLR1B-208ENST00000438748 KCNQ2O43526 872 aa16.39■□□□□ 0.21
POLR1B-208ENST00000438748 CABP4P57796 275 aa16.39■□□□□ 0.21
POLR1B-208ENST00000438748 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
POLR1B-208ENST00000438748 UPF1Q92900 1129 aaKnown RBP eCLIP16.39■□□□□ 0.21
POLR1B-208ENST00000438748 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
POLR1B-208ENST00000438748 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
POLR1B-208ENST00000438748 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
POLR1B-208ENST00000438748 RNMTO43148 476 aaKnown RBP16.38■□□□□ 0.21
POLR1B-208ENST00000438748 APBA3O96018 575 aa16.38■□□□□ 0.21
POLR1B-208ENST00000438748 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
POLR1B-208ENST00000438748 BAG6P46379 1132 aa16.38■□□□□ 0.21
POLR1B-208ENST00000438748 RIPK4P57078 832 aa16.38■□□□□ 0.21
POLR1B-208ENST00000438748 CCDC125Q86Z20 511 aa16.38■□□□□ 0.21
POLR1B-208ENST00000438748 VIRMAQ69YN4 1812 aaKnown RBP16.38■□□□□ 0.21
POLR1B-208ENST00000438748 DLG5Q8TDM6 1919 aa16.37■□□□□ 0.21
POLR1B-208ENST00000438748 ERVV-2B6SEH9 535 aa16.37■□□□□ 0.21
POLR1B-208ENST00000438748 APAF1O14727 1248 aa16.37■□□□□ 0.21
POLR1B-208ENST00000438748 TEFQ10587 303 aa16.37■□□□□ 0.21
POLR1B-208ENST00000438748 BTAF1O14981 1849 aa16.37■□□□□ 0.21
POLR1B-208ENST00000438748 ITGB4P16144 1822 aa16.37■□□□□ 0.21
POLR1B-208ENST00000438748 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
POLR1B-208ENST00000438748 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
POLR1B-208ENST00000438748 MCM10Q7L590 875 aa16.35■□□□□ 0.21
POLR1B-208ENST00000438748 PTF1AQ7RTS3 328 aa16.35■□□□□ 0.21
POLR1B-208ENST00000438748 MRC1P22897 1456 aa16.35■□□□□ 0.21
POLR1B-208ENST00000438748 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
POLR1B-208ENST00000438748 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
POLR1B-208ENST00000438748 SOCS7O14512 581 aa16.34■□□□□ 0.21
POLR1B-208ENST00000438748 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
POLR1B-208ENST00000438748 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
POLR1B-208ENST00000438748 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.2
POLR1B-208ENST00000438748 IL17REQ8NFR9 667 aa16.33■□□□□ 0.2
POLR1B-208ENST00000438748 PIGBQ92521 554 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms