RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ANKRD36BQ8N2N9 1353 aa20.03■□□□□ 0.8
LINC01088-201ENST00000437737 CCNL1Q9UK58 526 aaPredicted RBP20.01■□□□□ 0.79
LINC01088-201ENST00000437737 EDC4Q6P2E9 1401 aaKnown RBP20.01■□□□□ 0.79
LINC01088-201ENST00000437737 ATP10DQ9P241 1426 aa20.01■□□□□ 0.79
LINC01088-201ENST00000437737 IP6K1Q92551 441 aa20■□□□□ 0.79
LINC01088-201ENST00000437737 GOLGB1Q14789 3259 aaKnown RBP20■□□□□ 0.79
LINC01088-201ENST00000437737 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
LINC01088-201ENST00000437737 RGPD2P0DJD1 1756 aa19.98■□□□□ 0.79
LINC01088-201ENST00000437737 NSD2O96028 1365 aa19.98■□□□□ 0.79
LINC01088-201ENST00000437737 MSL1Q68DK7 614 aa19.98■□□□□ 0.79
LINC01088-201ENST00000437737 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
LINC01088-201ENST00000437737 SLC12A5Q9H2X9 1139 aa19.98■□□□□ 0.79
LINC01088-201ENST00000437737 COL23A1Q86Y22 540 aaPredicted RBP19.97■□□□□ 0.79
LINC01088-201ENST00000437737 TERF2IPQ9NYB0 399 aa19.97■□□□□ 0.79
LINC01088-201ENST00000437737 USP47Q96K76 1375 aa19.96■□□□□ 0.79
LINC01088-201ENST00000437737 NEUROD1Q13562 356 aa19.96■□□□□ 0.79
LINC01088-201ENST00000437737 GPBP1L1Q9HC44 474 aaPredicted RBP19.96■□□□□ 0.79
LINC01088-201ENST00000437737 A0A1W2PP64 1363 aa19.95■□□□□ 0.79
LINC01088-201ENST00000437737 C5P01031 1676 aa19.95■□□□□ 0.78
LINC01088-201ENST00000437737 ZCRB1Q8TBF4 217 aaKnown RBP19.95■□□□□ 0.78
LINC01088-201ENST00000437737 CEP350Q5VT06 3117 aa19.93■□□□□ 0.78
LINC01088-201ENST00000437737 MEGF6O75095 1541 aa19.93■□□□□ 0.78
LINC01088-201ENST00000437737 AMPHP49418 695 aa19.93■□□□□ 0.78
LINC01088-201ENST00000437737 HOXC9P31274 260 aa19.92■□□□□ 0.78
LINC01088-201ENST00000437737 ZNF526Q8TF50 670 aaPredicted RBP19.92■□□□□ 0.78
LINC01088-201ENST00000437737 CARD11Q9BXL7 1154 aa19.92■□□□□ 0.78
LINC01088-201ENST00000437737 COG3Q96JB2 828 aa19.91■□□□□ 0.78
LINC01088-201ENST00000437737 CD2APQ9Y5K6 639 aa19.91■□□□□ 0.78
LINC01088-201ENST00000437737 MAP3K19Q56UN5 1328 aa19.91■□□□□ 0.78
LINC01088-201ENST00000437737 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
LINC01088-201ENST00000437737 HSPA6P17066 643 aa19.9■□□□□ 0.78
LINC01088-201ENST00000437737 ADCY9O60503 1353 aa19.88■□□□□ 0.77
LINC01088-201ENST00000437737 FLAD1Q8NFF5 587 aa19.88■□□□□ 0.77
LINC01088-201ENST00000437737 FBLN1P23142 703 aa19.87■□□□□ 0.77
LINC01088-201ENST00000437737 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
LINC01088-201ENST00000437737 RAPGEF4Q8WZA2 1011 aa19.86■□□□□ 0.77
LINC01088-201ENST00000437737 USHBP1Q8N6Y0 703 aa19.85■□□□□ 0.77
LINC01088-201ENST00000437737 WWC3Q9ULE0 1092 aa19.85■□□□□ 0.77
LINC01088-201ENST00000437737 C4BP0C0L5 1744 aa19.85■□□□□ 0.77
LINC01088-201ENST00000437737 RTL1A6NKG5 1358 aa19.84■□□□□ 0.77
LINC01088-201ENST00000437737 PALLDQ8WX93 1383 aa19.84■□□□□ 0.77
LINC01088-201ENST00000437737 CGNL1Q0VF96 1302 aa19.84■□□□□ 0.77
LINC01088-201ENST00000437737 NBPF6Q5VWK0 638 aa19.84■□□□□ 0.77
LINC01088-201ENST00000437737 NBPF4Q96M43 638 aa19.84■□□□□ 0.77
LINC01088-201ENST00000437737 SMG6Q86US8 1419 aaKnown RBP19.84■□□□□ 0.77
LINC01088-201ENST00000437737 IGSF1Q8N6C5 1336 aa19.83■□□□□ 0.77
LINC01088-201ENST00000437737 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
LINC01088-201ENST00000437737 AK7Q96M32 723 aa19.83■□□□□ 0.77
LINC01088-201ENST00000437737 PUS7Q96PZ0 661 aaKnown RBP19.83■□□□□ 0.77
LINC01088-201ENST00000437737 MPRIPQ6WCQ1 1025 aa19.82■□□□□ 0.76
LINC01088-201ENST00000437737 ITGB4P16144 1822 aa19.81■□□□□ 0.76
LINC01088-201ENST00000437737 PCDH11XQ9BZA7 1347 aa19.81■□□□□ 0.76
LINC01088-201ENST00000437737 PCDH11YQ9BZA8 1340 aa19.81■□□□□ 0.76
LINC01088-201ENST00000437737 PHF14O94880 888 aa19.81■□□□□ 0.76
LINC01088-201ENST00000437737 RRS1Q15050 365 aaKnown RBP19.81■□□□□ 0.76
LINC01088-201ENST00000437737 TOGARAM1Q9Y4F4 1720 aa19.81■□□□□ 0.76
LINC01088-201ENST00000437737 UBR3Q6ZT12 1888 aa19.81■□□□□ 0.76
LINC01088-201ENST00000437737 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
LINC01088-201ENST00000437737 SMARCC1Q92922 1105 aaPredicted RBP19.78■□□□□ 0.76
LINC01088-201ENST00000437737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.76■□□□□ 0.75
LINC01088-201ENST00000437737 KIF3CO14782 793 aa19.76■□□□□ 0.75
LINC01088-201ENST00000437737 AMIGO3Q86WK7 504 aa19.76■□□□□ 0.75
LINC01088-201ENST00000437737 SMIM5Q71RC9 77 aa19.75■□□□□ 0.75
LINC01088-201ENST00000437737 GGNBP2Q9H3C7 697 aa19.75■□□□□ 0.75
LINC01088-201ENST00000437737 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
LINC01088-201ENST00000437737 CYP27B1O15528 508 aa19.73■□□□□ 0.75
LINC01088-201ENST00000437737 SSFA2P28290 1259 aa19.73■□□□□ 0.75
LINC01088-201ENST00000437737 APLP1P51693 650 aa19.73■□□□□ 0.75
LINC01088-201ENST00000437737 KIF20BQ96Q89 1820 aa19.73■□□□□ 0.75
LINC01088-201ENST00000437737 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
LINC01088-201ENST00000437737 INSRP06213 1382 aa19.72■□□□□ 0.75
LINC01088-201ENST00000437737 HSP90AB2PQ58FF8 381 aa19.72■□□□□ 0.75
LINC01088-201ENST00000437737 MAP2P11137 1827 aaKnown RBP19.72■□□□□ 0.75
LINC01088-201ENST00000437737 FLT4P35916 1363 aa19.71■□□□□ 0.75
LINC01088-201ENST00000437737 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
LINC01088-201ENST00000437737 ST20-MTHFSA0A0A6YYL1 179 aa19.71■□□□□ 0.75
LINC01088-201ENST00000437737 FYB1O15117 783 aa19.71■□□□□ 0.75
LINC01088-201ENST00000437737 TESK2Q96S53 571 aa19.71■□□□□ 0.75
LINC01088-201ENST00000437737 PIGBQ92521 554 aa19.7■□□□□ 0.74
LINC01088-201ENST00000437737 N4BP2Q86UW6 1770 aaPredicted RBP19.7■□□□□ 0.74
LINC01088-201ENST00000437737 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
LINC01088-201ENST00000437737 SLC24A1O60721 1099 aa19.69■□□□□ 0.74
LINC01088-201ENST00000437737 SIK1P57059 783 aa19.69■□□□□ 0.74
LINC01088-201ENST00000437737 LINC00116Q8NCU8 138 aa19.69■□□□□ 0.74
LINC01088-201ENST00000437737 KIF13BQ9NQT8 1826 aa19.68■□□□□ 0.74
LINC01088-201ENST00000437737 GNPATO15228 680 aa19.68■□□□□ 0.74
LINC01088-201ENST00000437737 TOMM70O94826 608 aa19.67■□□□□ 0.74
LINC01088-201ENST00000437737 KIF24Q5T7B8 1368 aa19.67■□□□□ 0.74
LINC01088-201ENST00000437737 PXDNLA1KZ92 1463 aa19.67■□□□□ 0.74
LINC01088-201ENST00000437737 KIAA1551Q9HCM1 1747 aa19.66■□□□□ 0.74
LINC01088-201ENST00000437737 MMP10P09238 476 aa19.66■□□□□ 0.74
LINC01088-201ENST00000437737 TMOD3Q9NYL9 352 aa19.66■□□□□ 0.74
LINC01088-201ENST00000437737 BCS1LQ9Y276 419 aa19.66■□□□□ 0.74
LINC01088-201ENST00000437737 ATP6V1AP38606 617 aa19.65■□□□□ 0.74
LINC01088-201ENST00000437737 SPG7Q9UQ90 795 aa19.65■□□□□ 0.74
LINC01088-201ENST00000437737 WDR90Q96KV7 1748 aa19.65■□□□□ 0.74
LINC01088-201ENST00000437737 NKX1-1Q15270 411 aaPredicted RBP19.64■□□□□ 0.73
LINC01088-201ENST00000437737 ITPK1Q13572 414 aa19.63■□□□□ 0.73
LINC01088-201ENST00000437737 ARHGAP27Q6ZUM4 889 aa19.63■□□□□ 0.73
LINC01088-201ENST00000437737 TGFB2P61812 414 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms