RNA–Protein interactions for RNA: ENST00000437728.1

RPS3AP29-201, Transcript of ribosomal protein S3a pseudogene 29, humanhuman

BASIC

Gene RPS3AP29, Length 769 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP29-201ENST00000437728 PTPN23Q9H3S7 1636 aa12.9□□□□□ -0.34
RPS3AP29-201ENST00000437728 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.35
RPS3AP29-201ENST00000437728 ZNF644Q9H582 1327 aaPredicted RBP12.89□□□□□ -0.35
RPS3AP29-201ENST00000437728 KCNH2Q12809 1159 aa12.89□□□□□ -0.35
RPS3AP29-201ENST00000437728 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
RPS3AP29-201ENST00000437728 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
RPS3AP29-201ENST00000437728 CTHP32929 405 aa12.88□□□□□ -0.35
RPS3AP29-201ENST00000437728 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
RPS3AP29-201ENST00000437728 MLH3Q9UHC1 1453 aa12.88□□□□□ -0.35
RPS3AP29-201ENST00000437728 INO80Q9ULG1 1556 aaPredicted RBP12.87□□□□□ -0.35
RPS3AP29-201ENST00000437728 YEATS2Q9ULM3 1422 aa12.87□□□□□ -0.35
RPS3AP29-201ENST00000437728 PER1O15534 1290 aaPredicted RBP12.86□□□□□ -0.35
RPS3AP29-201ENST00000437728 HELBQ8NG08 1087 aaPredicted RBP12.86□□□□□ -0.35
RPS3AP29-201ENST00000437728 UNC93B1Q9H1C4 597 aa12.86□□□□□ -0.35
RPS3AP29-201ENST00000437728 KIDINS220Q9ULH0 1771 aa12.85□□□□□ -0.35
RPS3AP29-201ENST00000437728 HNRNPMP52272 730 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPS3AP29-201ENST00000437728 SKOR1P84550 965 aa12.85□□□□□ -0.35
RPS3AP29-201ENST00000437728 AFAP1Q8N556 730 aa12.85□□□□□ -0.35
RPS3AP29-201ENST00000437728 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPS3AP29-201ENST00000437728 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
RPS3AP29-201ENST00000437728 ABCA6Q8N139 1617 aa12.84□□□□□ -0.35
RPS3AP29-201ENST00000437728 ATP7AQ04656 1500 aa12.84□□□□□ -0.35
RPS3AP29-201ENST00000437728 WNT7AO00755 349 aa12.84□□□□□ -0.35
RPS3AP29-201ENST00000437728 WNT7BP56706 349 aa12.84□□□□□ -0.35
RPS3AP29-201ENST00000437728 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
RPS3AP29-201ENST00000437728 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
RPS3AP29-201ENST00000437728 MAST1Q9Y2H9 1570 aa12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 FAM187AA6NFU0 413 aa12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 PKDCCQ504Y2 493 aa12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 CYP4X1Q8N118 509 aa12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 MAP10Q9P2G4 905 aa12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 SHANK2Q9UPX8 1470 aa12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.36
RPS3AP29-201ENST00000437728 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
RPS3AP29-201ENST00000437728 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
RPS3AP29-201ENST00000437728 LINC01559Q495D7 138 aa12.82□□□□□ -0.36
RPS3AP29-201ENST00000437728 TRAF7Q6Q0C0 670 aa12.82□□□□□ -0.36
RPS3AP29-201ENST00000437728 MRGPRX2Q96LB1 330 aa12.82□□□□□ -0.36
RPS3AP29-201ENST00000437728 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
RPS3AP29-201ENST00000437728 ABCC5O15440 1437 aa12.81□□□□□ -0.36
RPS3AP29-201ENST00000437728 C9orf84Q5VXU9 1444 aa12.81□□□□□ -0.36
RPS3AP29-201ENST00000437728 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
RPS3AP29-201ENST00000437728 BAP1Q92560 729 aa12.81□□□□□ -0.36
RPS3AP29-201ENST00000437728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.81□□□□□ -0.36
RPS3AP29-201ENST00000437728 DAPK1P53355 1430 aa12.8□□□□□ -0.36
RPS3AP29-201ENST00000437728 ATP10AO60312 1499 aa12.8□□□□□ -0.36
RPS3AP29-201ENST00000437728 SIGLEC1Q9BZZ2 1709 aa12.8□□□□□ -0.36
RPS3AP29-201ENST00000437728 TTC24A2A3L6 582 aaPredicted RBP12.8□□□□□ -0.36
RPS3AP29-201ENST00000437728 PCMTD1Q96MG8 357 aaPredicted RBP12.8□□□□□ -0.36
RPS3AP29-201ENST00000437728 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
RPS3AP29-201ENST00000437728 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
RPS3AP29-201ENST00000437728 DGAT1O75907 488 aa12.79□□□□□ -0.36
RPS3AP29-201ENST00000437728 SH3BP2P78314 561 aa12.79□□□□□ -0.36
RPS3AP29-201ENST00000437728 CTDSPL2Q05D32 466 aa12.79□□□□□ -0.36
RPS3AP29-201ENST00000437728 PPP2R2DQ66LE6 453 aa12.79□□□□□ -0.36
RPS3AP29-201ENST00000437728 GOPCQ9HD26 462 aa12.79□□□□□ -0.36
RPS3AP29-201ENST00000437728 LCE2BO14633 110 aa12.78□□□□□ -0.36
RPS3AP29-201ENST00000437728 AGLP35573 1532 aa12.78□□□□□ -0.36
RPS3AP29-201ENST00000437728 ADGBQ8N7X0 1667 aa12.77□□□□□ -0.36
RPS3AP29-201ENST00000437728 SNIP1Q8TAD8 396 aaKnown RBP12.77□□□□□ -0.37
RPS3AP29-201ENST00000437728 ZNF511Q8NB15 262 aa12.76□□□□□ -0.37
RPS3AP29-201ENST00000437728 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
RPS3AP29-201ENST00000437728 ADGRL2O95490 1459 aa12.76□□□□□ -0.37
RPS3AP29-201ENST00000437728 AP1G2O75843 785 aa12.75□□□□□ -0.37
RPS3AP29-201ENST00000437728 A2MP01023 1474 aa12.75□□□□□ -0.37
RPS3AP29-201ENST00000437728 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
RPS3AP29-201ENST00000437728 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
RPS3AP29-201ENST00000437728 FAM50AQ14320 339 aaKnown RBP12.74□□□□□ -0.37
RPS3AP29-201ENST00000437728 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
RPS3AP29-201ENST00000437728 PTPRKQ15262 1439 aa12.73□□□□□ -0.37
RPS3AP29-201ENST00000437728 MYT1Q01538 1121 aa12.72□□□□□ -0.37
RPS3AP29-201ENST00000437728 LRRN4Q8WUT4 740 aa12.72□□□□□ -0.37
RPS3AP29-201ENST00000437728 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.37
RPS3AP29-201ENST00000437728 J3QL48 77 aa12.71□□□□□ -0.37
RPS3AP29-201ENST00000437728 RFC5P40937 340 aa12.71□□□□□ -0.37
RPS3AP29-201ENST00000437728 DUOX2Q9NRD8 1548 aa12.71□□□□□ -0.38
RPS3AP29-201ENST00000437728 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
RPS3AP29-201ENST00000437728 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
RPS3AP29-201ENST00000437728 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
RPS3AP29-201ENST00000437728 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
RPS3AP29-201ENST00000437728 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
RPS3AP29-201ENST00000437728 ANKRD30AQ9BXX3 1397 aa12.69□□□□□ -0.38
RPS3AP29-201ENST00000437728 SIAH2O43255 324 aa12.69□□□□□ -0.38
RPS3AP29-201ENST00000437728 SMPD1P17405 629 aa12.69□□□□□ -0.38
RPS3AP29-201ENST00000437728 ARMC2Q8NEN0 867 aa12.69□□□□□ -0.38
RPS3AP29-201ENST00000437728 FOXJ1Q92949 421 aa12.69□□□□□ -0.38
RPS3AP29-201ENST00000437728 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
RPS3AP29-201ENST00000437728 ALDH1A1P00352 501 aa12.68□□□□□ -0.38
RPS3AP29-201ENST00000437728 AGERQ15109 404 aa12.68□□□□□ -0.38
RPS3AP29-201ENST00000437728 MADDQ8WXG6 1647 aa12.68□□□□□ -0.38
RPS3AP29-201ENST00000437728 ARID4BQ4LE39 1312 aaPredicted RBP12.67□□□□□ -0.38
RPS3AP29-201ENST00000437728 RNF17Q9BXT8 1623 aaKnown RBP12.67□□□□□ -0.38
RPS3AP29-201ENST00000437728 VARSP26640 1264 aaKnown RBP12.67□□□□□ -0.38
RPS3AP29-201ENST00000437728 FAM135AQ9P2D6 1515 aa12.66□□□□□ -0.38
RPS3AP29-201ENST00000437728 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
RPS3AP29-201ENST00000437728 USP17L8P0C7I0 530 aa12.65□□□□□ -0.38
RPS3AP29-201ENST00000437728 NR6A1Q15406 480 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms