RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 PLEKHO1Q53GL0 409 aaPredicted RBP17.64■□□□□ 0.41
RPE-208ENST00000436630 CDCA7Q9BWT1 371 aaPredicted RBP17.64■□□□□ 0.41
RPE-208ENST00000436630 DISP2A7MBM2 1401 aa17.64■□□□□ 0.41
RPE-208ENST00000436630 IL2RBP14784 551 aa17.63■□□□□ 0.41
RPE-208ENST00000436630 VPS72Q15906 364 aa17.63■□□□□ 0.41
RPE-208ENST00000436630 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
RPE-208ENST00000436630 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
RPE-208ENST00000436630 SPATA31A5Q5VU36 1347 aa17.63■□□□□ 0.41
RPE-208ENST00000436630 SPATA31A7Q8IWB4 1347 aa17.63■□□□□ 0.41
RPE-208ENST00000436630 LRRC37A3O60309 1634 aa17.62■□□□□ 0.41
RPE-208ENST00000436630 PDE3BQ13370 1112 aa17.62■□□□□ 0.41
RPE-208ENST00000436630 USP21Q9UK80 565 aa17.62■□□□□ 0.41
RPE-208ENST00000436630 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
RPE-208ENST00000436630 VIRMAQ69YN4 1812 aaKnown RBP17.62■□□□□ 0.41
RPE-208ENST00000436630 SHANK3Q9BYB0 1731 aa17.61■□□□□ 0.41
RPE-208ENST00000436630 RIPK4P57078 832 aa17.61■□□□□ 0.41
RPE-208ENST00000436630 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
RPE-208ENST00000436630 AFF2P51816 1311 aa17.61■□□□□ 0.41
RPE-208ENST00000436630 ZNF521Q96K83 1311 aa17.61■□□□□ 0.41
RPE-208ENST00000436630 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
RPE-208ENST00000436630 ATRNO75882 1429 aa17.61■□□□□ 0.41
RPE-208ENST00000436630 HTATSF1O43719 755 aaKnown RBP17.6■□□□□ 0.41
RPE-208ENST00000436630 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
RPE-208ENST00000436630 ADAMTS7Q9UKP4 1686 aa17.6■□□□□ 0.41
RPE-208ENST00000436630 TNS2Q63HR2 1409 aa17.59■□□□□ 0.41
RPE-208ENST00000436630 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
RPE-208ENST00000436630 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
RPE-208ENST00000436630 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
RPE-208ENST00000436630 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
RPE-208ENST00000436630 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.4
RPE-208ENST00000436630 C1orf141Q5JVX7 400 aa17.58■□□□□ 0.4
RPE-208ENST00000436630 ZNF530Q6P9A1 599 aaPredicted RBP17.58■□□□□ 0.4
RPE-208ENST00000436630 ILDR2Q71H61 639 aa17.58■□□□□ 0.4
RPE-208ENST00000436630 WDR63Q8IWG1 891 aa17.58■□□□□ 0.4
RPE-208ENST00000436630 WWC1Q8IX03 1113 aa17.58■□□□□ 0.4
RPE-208ENST00000436630 TRPC5Q9UL62 973 aaPredicted RBP17.58■□□□□ 0.4
RPE-208ENST00000436630 THSD7AQ9UPZ6 1657 aa17.58■□□□□ 0.4
RPE-208ENST00000436630 IL16Q14005 1332 aa17.57■□□□□ 0.4
RPE-208ENST00000436630 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
RPE-208ENST00000436630 AKAP4Q5JQC9 854 aa17.57■□□□□ 0.4
RPE-208ENST00000436630 RTF1Q92541 710 aaKnown RBP17.57■□□□□ 0.4
RPE-208ENST00000436630 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
RPE-208ENST00000436630 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
RPE-208ENST00000436630 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
RPE-208ENST00000436630 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
RPE-208ENST00000436630 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
RPE-208ENST00000436630 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
RPE-208ENST00000436630 GLI3P10071 1580 aa17.56■□□□□ 0.4
RPE-208ENST00000436630 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
RPE-208ENST00000436630 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
RPE-208ENST00000436630 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
RPE-208ENST00000436630 SALL2Q9Y467 1007 aaPredicted RBP17.55■□□□□ 0.4
RPE-208ENST00000436630 IFNL2Q8IZJ0 200 aa17.54■□□□□ 0.4
RPE-208ENST00000436630 MRC1P22897 1456 aa17.53■□□□□ 0.4
RPE-208ENST00000436630 E9PSI1 815 aa17.53■□□□□ 0.4
RPE-208ENST00000436630 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
RPE-208ENST00000436630 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
RPE-208ENST00000436630 PHKG2P15735 406 aa17.52■□□□□ 0.4
RPE-208ENST00000436630 GJD4Q96KN9 370 aaPredicted RBP17.52■□□□□ 0.4
RPE-208ENST00000436630 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
RPE-208ENST00000436630 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
RPE-208ENST00000436630 IFT57Q9NWB7 429 aa17.5■□□□□ 0.39
RPE-208ENST00000436630 EXOC5O00471 708 aa17.49■□□□□ 0.39
RPE-208ENST00000436630 DDB1Q16531 1140 aa17.49■□□□□ 0.39
RPE-208ENST00000436630 DCAF5Q96JK2 942 aa17.49■□□□□ 0.39
RPE-208ENST00000436630 BABAM1Q9NWV8 329 aa17.49■□□□□ 0.39
RPE-208ENST00000436630 KDM6AO15550 1401 aaPredicted RBP17.48■□□□□ 0.39
RPE-208ENST00000436630 CYP27B1O15528 508 aa17.48■□□□□ 0.39
RPE-208ENST00000436630 GNAI1P63096 354 aa17.48■□□□□ 0.39
RPE-208ENST00000436630 SLFN5Q08AF3 891 aa17.48■□□□□ 0.39
RPE-208ENST00000436630 NKX1-1Q15270 411 aaPredicted RBP17.48■□□□□ 0.39
RPE-208ENST00000436630 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
RPE-208ENST00000436630 FAM98CQ17RN3 349 aaKnown RBP17.47■□□□□ 0.39
RPE-208ENST00000436630 MCM10Q7L590 875 aa17.47■□□□□ 0.39
RPE-208ENST00000436630 QTRT2Q9H974 415 aaKnown RBP17.47■□□□□ 0.39
RPE-208ENST00000436630 TOGARAM1Q9Y4F4 1720 aa17.47■□□□□ 0.39
RPE-208ENST00000436630 RNMTO43148 476 aaKnown RBP17.46■□□□□ 0.39
RPE-208ENST00000436630 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
RPE-208ENST00000436630 CFAP44Q96MT7 982 aa17.46■□□□□ 0.39
RPE-208ENST00000436630 DOT1LQ8TEK3 1739 aa17.45■□□□□ 0.38
RPE-208ENST00000436630 ONECUT3O60422 494 aaPredicted RBP17.45■□□□□ 0.38
RPE-208ENST00000436630 TEFQ10587 303 aa17.45■□□□□ 0.38
RPE-208ENST00000436630 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
RPE-208ENST00000436630 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
RPE-208ENST00000436630 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
RPE-208ENST00000436630 RBM6P78332 1123 aaKnown RBP17.44■□□□□ 0.38
RPE-208ENST00000436630 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
RPE-208ENST00000436630 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
RPE-208ENST00000436630 THUMPD2Q9BTF0 503 aaKnown RBP17.44■□□□□ 0.38
RPE-208ENST00000436630 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
RPE-208ENST00000436630 PAPPAQ13219 1627 aa17.43■□□□□ 0.38
RPE-208ENST00000436630 ITGB4P16144 1822 aa17.43■□□□□ 0.38
RPE-208ENST00000436630 ERVV-2B6SEH9 535 aa17.43■□□□□ 0.38
RPE-208ENST00000436630 DDX54Q8TDD1 881 aaKnown RBP17.43■□□□□ 0.38
RPE-208ENST00000436630 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
RPE-208ENST00000436630 RGS17Q9UGC6 210 aaPredicted RBP17.43■□□□□ 0.38
RPE-208ENST00000436630 BCL9O00512 1426 aa17.42■□□□□ 0.38
RPE-208ENST00000436630 A0A0G2JS52 829 aa17.42■□□□□ 0.38
RPE-208ENST00000436630 MYT1Q01538 1121 aa17.42■□□□□ 0.38
RPE-208ENST00000436630 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms