RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 TATP17735 454 aaPredicted RBP22.3■■□□□ 1.16
CALD1-209ENST00000436461 MYT1Q01538 1121 aa22.3■■□□□ 1.16
CALD1-209ENST00000436461 BARGINQ6ZT62 677 aa22.3■■□□□ 1.16
CALD1-209ENST00000436461 OVOS2A0A0G2JMS6 1433 aa22.29■■□□□ 1.16
CALD1-209ENST00000436461 SHANK3Q9BYB0 1731 aa22.29■■□□□ 1.16
CALD1-209ENST00000436461 LRRC37A3O60309 1634 aa22.29■■□□□ 1.16
CALD1-209ENST00000436461 THSD7AQ9UPZ6 1657 aa22.28■■□□□ 1.16
CALD1-209ENST00000436461 RBM6P78332 1123 aaKnown RBP22.28■■□□□ 1.16
CALD1-209ENST00000436461 PKD1L3Q7Z443 1732 aa22.28■■□□□ 1.16
CALD1-209ENST00000436461 RXRBP28702 533 aa22.25■■□□□ 1.15
CALD1-209ENST00000436461 MTHFSDQ2M296 383 aaKnown RBP22.25■■□□□ 1.15
CALD1-209ENST00000436461 RUNDC1Q96C34 613 aa22.25■■□□□ 1.15
CALD1-209ENST00000436461 MAPK8IP3Q9UPT6 1336 aa22.25■■□□□ 1.15
CALD1-209ENST00000436461 DLG5Q8TDM6 1919 aa22.25■■□□□ 1.15
CALD1-209ENST00000436461 BRWD3Q6RI45 1802 aa22.24■■□□□ 1.15
CALD1-209ENST00000436461 RRP7AQ9Y3A4 280 aaKnown RBP22.24■■□□□ 1.15
CALD1-209ENST00000436461 APAF1O14727 1248 aa22.23■■□□□ 1.15
CALD1-209ENST00000436461 DDB1Q16531 1140 aa22.23■■□□□ 1.15
CALD1-209ENST00000436461 SEPT12Q8IYM1 358 aa22.23■■□□□ 1.15
CALD1-209ENST00000436461 ZCRB1Q8TBF4 217 aaKnown RBP22.23■■□□□ 1.15
CALD1-209ENST00000436461 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
CALD1-209ENST00000436461 NEFMP07197 916 aa22.22■■□□□ 1.15
CALD1-209ENST00000436461 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
CALD1-209ENST00000436461 CDCA7Q9BWT1 371 aaPredicted RBP22.22■■□□□ 1.15
CALD1-209ENST00000436461 TNS2Q63HR2 1409 aa22.22■■□□□ 1.15
CALD1-209ENST00000436461 ONECUT3O60422 494 aaPredicted RBP22.21■■□□□ 1.15
CALD1-209ENST00000436461 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
CALD1-209ENST00000436461 DDX54Q8TDD1 881 aaKnown RBP22.21■■□□□ 1.15
CALD1-209ENST00000436461 RGS12O14924 1447 aa22.21■■□□□ 1.15
CALD1-209ENST00000436461 EXOC5O00471 708 aa22.2■■□□□ 1.15
CALD1-209ENST00000436461 ZNF530Q6P9A1 599 aaPredicted RBP22.2■■□□□ 1.15
CALD1-209ENST00000436461 SPG7Q9UQ90 795 aa22.2■■□□□ 1.15
CALD1-209ENST00000436461 CYP27B1O15528 508 aa22.2■■□□□ 1.14
CALD1-209ENST00000436461 AMOTQ4VCS5 1084 aa22.2■■□□□ 1.14
CALD1-209ENST00000436461 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.14
CALD1-209ENST00000436461 VIRMAQ69YN4 1812 aaKnown RBP22.19■■□□□ 1.14
CALD1-209ENST00000436461 TMPOP42166 694 aaKnown RBP22.18■■□□□ 1.14
CALD1-209ENST00000436461 NFE2L2Q16236 605 aa22.17■■□□□ 1.14
CALD1-209ENST00000436461 FAM182BQ5T319 152 aa22.17■■□□□ 1.14
CALD1-209ENST00000436461 GAS2L2Q8NHY3 880 aa22.17■■□□□ 1.14
CALD1-209ENST00000436461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.17■■□□□ 1.142e-7■■■□□ 15.9
CALD1-209ENST00000436461 PCDH11XQ9BZA7 1347 aa22.17■■□□□ 1.14
CALD1-209ENST00000436461 PCDH11YQ9BZA8 1340 aa22.17■■□□□ 1.14
CALD1-209ENST00000436461 EP400Q96L91 3159 aa22.16■■□□□ 1.14
CALD1-209ENST00000436461 PHKG2P15735 406 aa22.16■■□□□ 1.14
CALD1-209ENST00000436461 MARCH10Q8NA82 808 aaPredicted RBP22.16■■□□□ 1.14
CALD1-209ENST00000436461 RIPK4P57078 832 aa22.15■■□□□ 1.14
CALD1-209ENST00000436461 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
CALD1-209ENST00000436461 PLEKHG2Q9H7P9 1386 aa22.15■■□□□ 1.14
CALD1-209ENST00000436461 DCTN1Q14203 1278 aa22.14■■□□□ 1.14
CALD1-209ENST00000436461 C1orf141Q5JVX7 400 aa22.14■■□□□ 1.14
CALD1-209ENST00000436461 IFNL2Q8IZJ0 200 aa22.14■■□□□ 1.14
CALD1-209ENST00000436461 MPRIPQ6WCQ1 1025 aa22.13■■□□□ 1.13
CALD1-209ENST00000436461 MAP3K5Q99683 1374 aa22.13■■□□□ 1.13
CALD1-209ENST00000436461 AKAP4Q5JQC9 854 aa22.13■■□□□ 1.13
CALD1-209ENST00000436461 KAT6BQ8WYB5 2073 aa22.12■■□□□ 1.13
CALD1-209ENST00000436461 TOGARAM1Q9Y4F4 1720 aa22.12■■□□□ 1.13
CALD1-209ENST00000436461 HNRNPUQ00839 825 aaKnown RBP eCLIP22.12■■□□□ 1.13
CALD1-209ENST00000436461 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
CALD1-209ENST00000436461 KDM6AO15550 1401 aaPredicted RBP22.11■■□□□ 1.13
CALD1-209ENST00000436461 GNAT3A8MTJ3 354 aa22.11■■□□□ 1.13
CALD1-209ENST00000436461 MCM10Q7L590 875 aa22.11■■□□□ 1.13
CALD1-209ENST00000436461 THUMPD2Q9BTF0 503 aaKnown RBP22.11■■□□□ 1.13
CALD1-209ENST00000436461 SCN11AQ9UI33 1791 aa22.11■■□□□ 1.13
CALD1-209ENST00000436461 KRT27Q7Z3Y8 459 aa22.1■■□□□ 1.13
CALD1-209ENST00000436461 LGR6Q9HBX8 967 aa22.1■■□□□ 1.13
CALD1-209ENST00000436461 TRIM35Q9UPQ4 493 aa22.1■■□□□ 1.13
CALD1-209ENST00000436461 DOT1LQ8TEK3 1739 aa22.1■■□□□ 1.13
CALD1-209ENST00000436461 IL17REQ8NFR9 667 aa22.09■■□□□ 1.13
CALD1-209ENST00000436461 RTF1Q92541 710 aaKnown RBP22.07■■□□□ 1.12
CALD1-209ENST00000436461 ADAMTS7Q9UKP4 1686 aa22.07■■□□□ 1.12
CALD1-209ENST00000436461 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
CALD1-209ENST00000436461 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
CALD1-209ENST00000436461 ITGB4P16144 1822 aa22.06■■□□□ 1.12
CALD1-209ENST00000436461 RNMTO43148 476 aaKnown RBP22.06■■□□□ 1.12
CALD1-209ENST00000436461 DCAF5Q96JK2 942 aa22.05■■□□□ 1.12
CALD1-209ENST00000436461 SBF2Q86WG5 1849 aa22.05■■□□□ 1.12
CALD1-209ENST00000436461 HSP90AB1P08238 724 aaKnown RBP22.04■■□□□ 1.12
CALD1-209ENST00000436461 WWC1Q8IX03 1113 aa22.04■■□□□ 1.12
CALD1-209ENST00000436461 LMOD3Q0VAK6 560 aa22.02■■□□□ 1.12
CALD1-209ENST00000436461 SYTL4Q96C24 671 aaPredicted RBP22.02■■□□□ 1.12
CALD1-209ENST00000436461 CEMIPQ8WUJ3 1361 aa22.02■■□□□ 1.12
CALD1-209ENST00000436461 HTATSF1O43719 755 aaKnown RBP22.02■■□□□ 1.11
CALD1-209ENST00000436461 SIPA1L3O60292 1781 aaPredicted RBP22.01■■□□□ 1.11
CALD1-209ENST00000436461 KCNQ2O43526 872 aa22.01■■□□□ 1.11
CALD1-209ENST00000436461 CCDC27Q2M243 656 aa22.01■■□□□ 1.11
CALD1-209ENST00000436461 PTF1AQ7RTS3 328 aa22.01■■□□□ 1.11
CALD1-209ENST00000436461 PRIM1P49642 420 aaKnown RBP22■■□□□ 1.11
CALD1-209ENST00000436461 NFATC2IPQ8NCF5 419 aa21.99■■□□□ 1.11
CALD1-209ENST00000436461 MRC1P22897 1456 aa21.99■■□□□ 1.11
CALD1-209ENST00000436461 ZNF521Q96K83 1311 aa21.99■■□□□ 1.11
CALD1-209ENST00000436461 CABP4P57796 275 aa21.98■■□□□ 1.11
CALD1-209ENST00000436461 TEFQ10587 303 aa21.98■■□□□ 1.11
CALD1-209ENST00000436461 NHSQ6T4R5 1651 aa21.98■■□□□ 1.11
CALD1-209ENST00000436461 FAM196AQ6ZSG2 479 aa21.98■■□□□ 1.11
CALD1-209ENST00000436461 SLC52A2Q9HAB3 445 aa21.98■■□□□ 1.11
CALD1-209ENST00000436461 MIS18AQ9NYP9 233 aa21.98■■□□□ 1.11
CALD1-209ENST00000436461 LAS1LQ9Y4W2 734 aaKnown RBP21.98■■□□□ 1.11
CALD1-209ENST00000436461 BCL9O00512 1426 aa21.97■■□□□ 1.11
CALD1-209ENST00000436461 ERVV-2B6SEH9 535 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms