RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PTGER2P43116 358 aa15.02■□□□□ -0
HMGCL-204ENST00000436439 AMPHP49418 695 aa15.02■□□□□ -0
HMGCL-204ENST00000436439 DDX54Q8TDD1 881 aaKnown RBP15.02■□□□□ -0
HMGCL-204ENST00000436439 LY75O60449 1722 aa15.02□□□□□ -0.01
HMGCL-204ENST00000436439 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
HMGCL-204ENST00000436439 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
HMGCL-204ENST00000436439 QSER1Q2KHR3 1735 aa15.01□□□□□ -0.01
HMGCL-204ENST00000436439 RTL1A6NKG5 1358 aa15□□□□□ -0.01
HMGCL-204ENST00000436439 ZNF827Q17R98 1081 aa14.99□□□□□ -0.01
HMGCL-204ENST00000436439 NSD2O96028 1365 aa14.99□□□□□ -0.01
HMGCL-204ENST00000436439 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
HMGCL-204ENST00000436439 USHBP1Q8N6Y0 703 aa14.98□□□□□ -0.01
HMGCL-204ENST00000436439 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
HMGCL-204ENST00000436439 SGIP1Q9BQI5 828 aa14.98□□□□□ -0.01
HMGCL-204ENST00000436439 CARD14Q9BXL6 1004 aa14.98□□□□□ -0.01
HMGCL-204ENST00000436439 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
HMGCL-204ENST00000436439 MAP2P11137 1827 aaKnown RBP14.96□□□□□ -0.01
HMGCL-204ENST00000436439 COL24A1Q17RW2 1714 aa14.96□□□□□ -0.01
HMGCL-204ENST00000436439 PRIM1P49642 420 aaKnown RBP14.96□□□□□ -0.02
HMGCL-204ENST00000436439 KCNQ4P56696 695 aa14.96□□□□□ -0.02
HMGCL-204ENST00000436439 HSP90AB2PQ58FF8 381 aa14.96□□□□□ -0.02
HMGCL-204ENST00000436439 ZCRB1Q8TBF4 217 aaKnown RBP14.96□□□□□ -0.02
HMGCL-204ENST00000436439 SYTL4Q96C24 671 aaPredicted RBP14.96□□□□□ -0.02
HMGCL-204ENST00000436439 MTFR1LQ9H019 292 aa14.96□□□□□ -0.02
HMGCL-204ENST00000436439 NSD3Q9BZ95 1437 aa14.95□□□□□ -0.02
HMGCL-204ENST00000436439 TOGARAM1Q9Y4F4 1720 aa14.95□□□□□ -0.02
HMGCL-204ENST00000436439 YY1P25490 414 aa14.95□□□□□ -0.02
HMGCL-204ENST00000436439 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
HMGCL-204ENST00000436439 INSRP06213 1382 aa14.94□□□□□ -0.02
HMGCL-204ENST00000436439 ITGB4P16144 1822 aa14.94□□□□□ -0.02
HMGCL-204ENST00000436439 FHDC1Q9C0D6 1143 aaPredicted RBP14.94□□□□□ -0.02
HMGCL-204ENST00000436439 FLT4P35916 1363 aa14.94□□□□□ -0.02
HMGCL-204ENST00000436439 PKD1L3Q7Z443 1732 aa14.93□□□□□ -0.02
HMGCL-204ENST00000436439 SMG6Q86US8 1419 aaKnown RBP14.93□□□□□ -0.02
HMGCL-204ENST00000436439 EMILIN1Q9Y6C2 1016 aa14.93□□□□□ -0.02
HMGCL-204ENST00000436439 SLC27A3Q5K4L6 730 aa14.92□□□□□ -0.02
HMGCL-204ENST00000436439 SYT17Q9BSW7 474 aa14.92□□□□□ -0.02
HMGCL-204ENST00000436439 TAF1LQ8IZX4 1826 aa14.92□□□□□ -0.02
HMGCL-204ENST00000436439 C5P01031 1676 aa14.91□□□□□ -0.02
HMGCL-204ENST00000436439 POLR3GLQ9BT43 218 aa14.91□□□□□ -0.02
HMGCL-204ENST00000436439 PNPLA7Q6ZV29 1317 aa14.91□□□□□ -0.02
HMGCL-204ENST00000436439 KIF24Q5T7B8 1368 aa14.91□□□□□ -0.02
HMGCL-204ENST00000436439 TATP17735 454 aaPredicted RBP14.9□□□□□ -0.02
HMGCL-204ENST00000436439 RAPGEF4Q8WZA2 1011 aa14.9□□□□□ -0.02
HMGCL-204ENST00000436439 CHD4Q14839 1912 aa14.89□□□□□ -0.03
HMGCL-204ENST00000436439 NCAPD2Q15021 1401 aa14.89□□□□□ -0.03
HMGCL-204ENST00000436439 CGNL1Q0VF96 1302 aa14.89□□□□□ -0.03
HMGCL-204ENST00000436439 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
HMGCL-204ENST00000436439 ARXQ96QS3 562 aa14.89□□□□□ -0.03
HMGCL-204ENST00000436439 MIER1Q8N108 512 aa14.88□□□□□ -0.03
HMGCL-204ENST00000436439 PCDH11XQ9BZA7 1347 aa14.87□□□□□ -0.03
HMGCL-204ENST00000436439 PCDH11YQ9BZA8 1340 aa14.87□□□□□ -0.03
HMGCL-204ENST00000436439 CYP27B1O15528 508 aa14.87□□□□□ -0.03
HMGCL-204ENST00000436439 PER1O15534 1290 aaPredicted RBP14.87□□□□□ -0.03
HMGCL-204ENST00000436439 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
HMGCL-204ENST00000436439 PPM1GO15355 546 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-204ENST00000436439 ANP32CO43423 234 aa14.86□□□□□ -0.03
HMGCL-204ENST00000436439 TFCP2L1Q9NZI6 479 aa14.86□□□□□ -0.03
HMGCL-204ENST00000436439 UTRNP46939 3433 aa14.86□□□□□ -0.03
HMGCL-204ENST00000436439 MAP3K5Q99683 1374 aa14.86□□□□□ -0.03
HMGCL-204ENST00000436439 SLC16A10Q8TF71 515 aa14.85□□□□□ -0.03
HMGCL-204ENST00000436439 PANK3Q9H999 370 aa14.85□□□□□ -0.03
HMGCL-204ENST00000436439 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
HMGCL-204ENST00000436439 NPC1L1Q9UHC9 1359 aa14.84□□□□□ -0.03
HMGCL-204ENST00000436439 C4BP0C0L5 1744 aa14.84□□□□□ -0.03
HMGCL-204ENST00000436439 POLKQ9UBT6 870 aa14.84□□□□□ -0.03
HMGCL-204ENST00000436439 PALLDQ8WX93 1383 aa14.83□□□□□ -0.04
HMGCL-204ENST00000436439 UBR3Q6ZT12 1888 aa14.83□□□□□ -0.04
HMGCL-204ENST00000436439 MPRIPQ6WCQ1 1025 aa14.83□□□□□ -0.04
HMGCL-204ENST00000436439 COL23A1Q86Y22 540 aaPredicted RBP14.83□□□□□ -0.04
HMGCL-204ENST00000436439 EYA1Q99502 592 aa14.83□□□□□ -0.04
HMGCL-204ENST00000436439 KLHL34Q8N239 644 aa14.82□□□□□ -0.04
HMGCL-204ENST00000436439 PRKRIP1Q9H875 184 aaPredicted RBP14.82□□□□□ -0.04
HMGCL-204ENST00000436439 POLD1P28340 1107 aa14.81□□□□□ -0.04
HMGCL-204ENST00000436439 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
HMGCL-204ENST00000436439 MSH5O43196 834 aa14.8□□□□□ -0.04
HMGCL-204ENST00000436439 NKX1-1Q15270 411 aaPredicted RBP14.8□□□□□ -0.04
HMGCL-204ENST00000436439 NLGN2Q8NFZ4 835 aa14.8□□□□□ -0.04
HMGCL-204ENST00000436439 PIGBQ92521 554 aa14.8□□□□□ -0.04
HMGCL-204ENST00000436439 CCER2I3L3R5 266 aa14.79□□□□□ -0.04
HMGCL-204ENST00000436439 EIF4A2Q14240 407 aaKnown RBP14.79□□□□□ -0.04
HMGCL-204ENST00000436439 MSL1Q68DK7 614 aa14.79□□□□□ -0.04
HMGCL-204ENST00000436439 AMIGO3Q86WK7 504 aa14.79□□□□□ -0.04
HMGCL-204ENST00000436439 KNSTRNQ9Y448 316 aa14.79□□□□□ -0.04
HMGCL-204ENST00000436439 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
HMGCL-204ENST00000436439 ZNF784Q8NCA9 323 aaPredicted RBP14.78□□□□□ -0.04
HMGCL-204ENST00000436439 SPG7Q9UQ90 795 aa14.78□□□□□ -0.04
HMGCL-204ENST00000436439 RALBP1Q15311 655 aa14.77□□□□□ -0.04
HMGCL-204ENST00000436439 AMER1Q5JTC6 1135 aaPredicted RBP14.77□□□□□ -0.04
HMGCL-204ENST00000436439 PHKG2P15735 406 aa14.76□□□□□ -0.05
HMGCL-204ENST00000436439 GPR162Q16538 588 aa14.76□□□□□ -0.05
HMGCL-204ENST00000436439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.76□□□□□ -0.05
HMGCL-204ENST00000436439 SMARCC1Q92922 1105 aaPredicted RBP14.75□□□□□ -0.05
HMGCL-204ENST00000436439 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
HMGCL-204ENST00000436439 IGSF1Q8N6C5 1336 aa14.75□□□□□ -0.05
HMGCL-204ENST00000436439 IFNL2Q8IZJ0 200 aa14.74□□□□□ -0.05
HMGCL-204ENST00000436439 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
HMGCL-204ENST00000436439 ASAP1Q9ULH1 1129 aa14.74□□□□□ -0.05
HMGCL-204ENST00000436439 LINC00116Q8NCU8 138 aa14.73□□□□□ -0.05
HMGCL-204ENST00000436439 TMOD3Q9NYL9 352 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms