RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 TUBGCP6Q96RT7 1819 aa25.87■■□□□ 1.73
UBXN1-203ENST00000436354 HOXC9P31274 260 aa25.87■■□□□ 1.73
UBXN1-203ENST00000436354 AMPHP49418 695 aa25.87■■□□□ 1.73
UBXN1-203ENST00000436354 C1QTNF8P60827 252 aa25.87■■□□□ 1.73
UBXN1-203ENST00000436354 LY75O60449 1722 aa25.87■■□□□ 1.73
UBXN1-203ENST00000436354 KCNQ4P56696 695 aa25.86■■□□□ 1.73
UBXN1-203ENST00000436354 ZCRB1Q8TBF4 217 aaKnown RBP25.86■■□□□ 1.73
UBXN1-203ENST00000436354 TONSLQ96HA7 1378 aa25.85■■□□□ 1.73
UBXN1-203ENST00000436354 SENP3-EIF4A1A0A087X0R7 540 aa25.84■■□□□ 1.73
UBXN1-203ENST00000436354 SLC24A1O60721 1099 aa25.84■■□□□ 1.73
UBXN1-203ENST00000436354 RGPD2P0DJD1 1756 aa25.84■■□□□ 1.73
UBXN1-203ENST00000436354 SHANK3Q9BYB0 1731 aa25.83■■□□□ 1.73
UBXN1-203ENST00000436354 PELP1Q8IZL8 1130 aaKnown RBP25.83■■□□□ 1.73
UBXN1-203ENST00000436354 NSD2O96028 1365 aa25.82■■□□□ 1.72
UBXN1-203ENST00000436354 FBLN1P23142 703 aa25.81■■□□□ 1.72
UBXN1-203ENST00000436354 TESK2Q96S53 571 aa25.81■■□□□ 1.72
UBXN1-203ENST00000436354 CCNL1Q9UK58 526 aaPredicted RBP25.81■■□□□ 1.72
UBXN1-203ENST00000436354 MEGF6O75095 1541 aa25.81■■□□□ 1.72
UBXN1-203ENST00000436354 ST20-MTHFSA0A0A6YYL1 179 aa25.79■■□□□ 1.72
UBXN1-203ENST00000436354 RTL1A6NKG5 1358 aa25.79■■□□□ 1.72
UBXN1-203ENST00000436354 USP47Q96K76 1375 aa25.79■■□□□ 1.72
UBXN1-203ENST00000436354 NLGN2Q8NFZ4 835 aa25.78■■□□□ 1.72
UBXN1-203ENST00000436354 CGNL1Q0VF96 1302 aa25.78■■□□□ 1.72
UBXN1-203ENST00000436354 MSH5O43196 834 aa25.76■■□□□ 1.71
UBXN1-203ENST00000436354 GIGYF1O75420 1035 aaPredicted RBP25.76■■□□□ 1.71
UBXN1-203ENST00000436354 NBPF6Q5VWK0 638 aa25.75■■□□□ 1.71
UBXN1-203ENST00000436354 RAPGEF4Q8WZA2 1011 aa25.75■■□□□ 1.71
UBXN1-203ENST00000436354 NBPF4Q96M43 638 aa25.75■■□□□ 1.71
UBXN1-203ENST00000436354 SMG6Q86US8 1419 aaKnown RBP25.74■■□□□ 1.71
UBXN1-203ENST00000436354 HMGB2P26583 209 aaKnown RBP25.74■■□□□ 1.71
UBXN1-203ENST00000436354 RRS1Q15050 365 aaKnown RBP25.74■■□□□ 1.71
UBXN1-203ENST00000436354 COL23A1Q86Y22 540 aaPredicted RBP25.74■■□□□ 1.71
UBXN1-203ENST00000436354 GRIN3BO60391 1043 aa25.73■■□□□ 1.71
UBXN1-203ENST00000436354 USHBP1Q8N6Y0 703 aa25.72■■□□□ 1.71
UBXN1-203ENST00000436354 FYB1O15117 783 aa25.71■■□□□ 1.71
UBXN1-203ENST00000436354 TATP17735 454 aaPredicted RBP25.71■■□□□ 1.71
UBXN1-203ENST00000436354 GGNBP2Q9H3C7 697 aa25.7■■□□□ 1.7
UBXN1-203ENST00000436354 C5P01031 1676 aa25.7■■□□□ 1.7
UBXN1-203ENST00000436354 YBX3P16989 372 aaKnown RBP eCLIP25.69■■□□□ 1.7
UBXN1-203ENST00000436354 PCDH11XQ9BZA7 1347 aa25.68■■□□□ 1.7
UBXN1-203ENST00000436354 PCDH11YQ9BZA8 1340 aa25.68■■□□□ 1.7
UBXN1-203ENST00000436354 FLAD1Q8NFF5 587 aa25.68■■□□□ 1.7
UBXN1-203ENST00000436354 MSL1Q68DK7 614 aa25.67■■□□□ 1.7
UBXN1-203ENST00000436354 INSRP06213 1382 aa25.67■■□□□ 1.7
UBXN1-203ENST00000436354 TMF1P82094 1093 aa25.66■■□□□ 1.7
UBXN1-203ENST00000436354 TAF1LQ8IZX4 1826 aa25.65■■□□□ 1.7
UBXN1-203ENST00000436354 HSP90AB2PQ58FF8 381 aa25.65■■□□□ 1.7
UBXN1-203ENST00000436354 CD2APQ9Y5K6 639 aa25.65■■□□□ 1.7
UBXN1-203ENST00000436354 PALLDQ8WX93 1383 aa25.65■■□□□ 1.7
UBXN1-203ENST00000436354 GOLGB1Q14789 3259 aaKnown RBP25.64■■□□□ 1.7
UBXN1-203ENST00000436354 MPRIPQ6WCQ1 1025 aa25.64■■□□□ 1.7
UBXN1-203ENST00000436354 FLT4P35916 1363 aa25.64■■□□□ 1.69
UBXN1-203ENST00000436354 KIF24Q5T7B8 1368 aa25.64■■□□□ 1.69
UBXN1-203ENST00000436354 KIF20BQ96Q89 1820 aa25.63■■□□□ 1.69
UBXN1-203ENST00000436354 SMARCC1Q92922 1105 aaPredicted RBP25.61■■□□□ 1.69
UBXN1-203ENST00000436354 CYP27B1O15528 508 aa25.6■■□□□ 1.69
UBXN1-203ENST00000436354 ITGB4P16144 1822 aa25.59■■□□□ 1.69
UBXN1-203ENST00000436354 CDCA8Q53HL2 280 aa25.59■■□□□ 1.69
UBXN1-203ENST00000436354 C4BP0C0L5 1744 aa25.58■■□□□ 1.69
UBXN1-203ENST00000436354 AK7Q96M32 723 aa25.58■■□□□ 1.69
UBXN1-203ENST00000436354 TOGARAM1Q9Y4F4 1720 aa25.57■■□□□ 1.68
UBXN1-203ENST00000436354 ATP10DQ9P241 1426 aa25.56■■□□□ 1.68
UBXN1-203ENST00000436354 PKD1L3Q7Z443 1732 aa25.56■■□□□ 1.68
UBXN1-203ENST00000436354 NSD3Q9BZ95 1437 aa25.54■■□□□ 1.68
UBXN1-203ENST00000436354 UBR3Q6ZT12 1888 aa25.53■■□□□ 1.68
UBXN1-203ENST00000436354 PIGBQ92521 554 aa25.53■■□□□ 1.68
UBXN1-203ENST00000436354 NKX1-1Q15270 411 aaPredicted RBP25.52■■□□□ 1.68
UBXN1-203ENST00000436354 GPBP1L1Q9HC44 474 aaPredicted RBP25.52■■□□□ 1.68
UBXN1-203ENST00000436354 SPG7Q9UQ90 795 aa25.52■■□□□ 1.68
UBXN1-203ENST00000436354 EMILIN1Q9Y6C2 1016 aa25.52■■□□□ 1.68
UBXN1-203ENST00000436354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.51■■□□□ 1.67
UBXN1-203ENST00000436354 PHF14O94880 888 aa25.51■■□□□ 1.67
UBXN1-203ENST00000436354 NCAPD2Q15021 1401 aa25.5■■□□□ 1.67
UBXN1-203ENST00000436354 AMIGO3Q86WK7 504 aa25.5■■□□□ 1.67
UBXN1-203ENST00000436354 CARD14Q9BXL6 1004 aa25.5■■□□□ 1.67
UBXN1-203ENST00000436354 PPM1GO15355 546 aaPredicted RBP25.49■■□□□ 1.67
UBXN1-203ENST00000436354 SSFA2P28290 1259 aa25.49■■□□□ 1.67
UBXN1-203ENST00000436354 ADCY9O60503 1353 aa25.48■■□□□ 1.67
UBXN1-203ENST00000436354 IGSF1Q8N6C5 1336 aa25.48■■□□□ 1.67
UBXN1-203ENST00000436354 LOC102724428A0A0B4J2F2 783 aa25.48■■□□□ 1.67
UBXN1-203ENST00000436354 SIK1P57059 783 aa25.48■■□□□ 1.67
UBXN1-203ENST00000436354 MAP2P11137 1827 aaKnown RBP25.48■■□□□ 1.67
UBXN1-203ENST00000436354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.47■■□□□ 1.67
UBXN1-203ENST00000436354 ANKRD26Q9UPS8 1709 aa25.46■■□□□ 1.67
UBXN1-203ENST00000436354 WASHC2AQ641Q2 1341 aa25.46■■□□□ 1.67
UBXN1-203ENST00000436354 TMOD3Q9NYL9 352 aa25.46■■□□□ 1.67
UBXN1-203ENST00000436354 SMIM5Q71RC9 77 aa25.45■■□□□ 1.66
UBXN1-203ENST00000436354 LINC00116Q8NCU8 138 aa25.45■■□□□ 1.66
UBXN1-203ENST00000436354 ZNF526Q8TF50 670 aaPredicted RBP25.44■■□□□ 1.66
UBXN1-203ENST00000436354 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
UBXN1-203ENST00000436354 IFFO2Q5TF58 517 aa25.43■■□□□ 1.66
UBXN1-203ENST00000436354 EYA1Q99502 592 aa25.43■■□□□ 1.66
UBXN1-203ENST00000436354 IFNL2Q8IZJ0 200 aa25.42■■□□□ 1.66
UBXN1-203ENST00000436354 WWC3Q9ULE0 1092 aa25.42■■□□□ 1.66
UBXN1-203ENST00000436354 ASAP1Q9ULH1 1129 aa25.42■■□□□ 1.66
UBXN1-203ENST00000436354 CEP350Q5VT06 3117 aa25.41■■□□□ 1.66
UBXN1-203ENST00000436354 GNPATO15228 680 aa25.41■■□□□ 1.66
UBXN1-203ENST00000436354 ATP6V1AP38606 617 aa25.41■■□□□ 1.66
UBXN1-203ENST00000436354 PHKG2P15735 406 aa25.4■■□□□ 1.66
UBXN1-203ENST00000436354 ITPK1Q13572 414 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms